| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022034
Identifier: 124022034
GI number: 124022034
Start: 334005
End: 335360
Strand: Direct
Name: 124022034
Synonym: P9303_03231
Alternate gene names: NA
Gene position: 334005-335360 (Clockwise)
Preceding gene: 124022032
Following gene: 124022035
Centisome position: 12.45
GC content: 57.37
Gene sequence:
>1356_bases GTGGCTTCGGCCTTGCGAGTTCAAGTCTCGCCATCCGCATTCTTTCCTTACAACTTGACCTCACTCCCTCCAGCTGTCAT GCCGGACACTTCGCTGGCGGTTGTTCTGGTTTCCAATGGTCCAGGGGAACTAGCGACTTGGGTTAGACCCATTGCTGAGA GCCTGCATCGCAGCATATTGATGCGTCCTCGCGCTGCAAGCTCACCTGTTGACCTGAGGCTGGTGTTGGTGCCTTGCCCG AATGCCACAGGACAGGAGGCTGATGCGGCTAGGCGATGGATTCAGTTTGAGCAGATCACGCCAGCAAATCAGTTTTGGAA TTTGTTGTTATTTCCCCGACGCTATGGGCCATGGCCTCGCCAAGGAGTGGTCGTTTTCCTTGGGGGAGATCAGTTCTGGA GCGTGCTTCTTTCAGGCCGCTTGGGCTACCGCCATCTCACCTACGCCGAGTGGGTGGCCCGCTGGCCTCGTTGGAATGAC TGCATTGCTGCGATGTCTCCCAAAGTGCGGGATCAGCTGCCACGTCGTTTCCGGGAACGTTGCACGGTGGTGGGAGACCT GATGGCGGATTTGTCTTGTCTTGCACGCGCTGAAGCTCCGCTGCCACAAGGCGACTGGGTGGCTTTATTGCCGGGGTCTA AACGGGCCAAGCTCTGCGTGGGGGTTCCTTTCCTTTTGGAGGCGGCTGATCGATTGGCTCGGCTGCGACCTGGATGTCGG TTTTTGCTTCCTGTTGCACCCACCACAAGCGTTAAGGAGTTGGAAAGCTTTATGAGTTCGAGCAATCCGATTGCTGCTGC CTATCGCTCAGCTATTGCCATGGTCAGGCCAGCTGAGCTTGATCAGCCTTGGCGAAGATTGATCACCAGGGCCGGCACGG TCATCTATCTCCAAGAGGACCATCCTGCGCATGGTCCCTTGAGCCAATGTGATTTAGCTCTCACCACTGTTGGGGCAAAT ACGGCCGAATTGGGGGCGCTCGGTTTGCCAATGATTGTGATCGTGCCCACCCAGCATTTGGCTGTGATGCAGGCATGGGA TGGCTGGATTGGTTTGCTGGCTCGGCTCCCTGGATTGCGTTGGTGCATTGGTGTCTTGCTCAGTGCATGGCGGCTGCGAC GCCATGGATTCCTGGCTTGGCCCAATATTTCTGCTGGACGCATGGTGGTTCCGGAGCGAGTGGGCTCAATCTCGCCACAG GACATTGCTAATGAGGCGTCAGCTTGGCTGGAATCTCCTGAACGGCTCAGGGGGCTGCGCGAGGATCTGCGCAGTCTGCG TGGGCAACCTGGGGCTGTGTCTGCACTGGTTCAGCAGGTGCGTCGTTTGCTGCCCAAAGCTCTCGGTGCTTTTTAG
Upstream 100 bases:
>100_bases GGACCATTGGCCGGTATGATCCTCGATCGACGAAGCCCGCGAGGTTGAGTCGGCCACGCGGATGTGGTGGAATTGGTAGA CACGCACGTTTGAGGGGCGT
Downstream 100 bases:
>100_bases ATTCGAAGGCTGTTTAGGGTCTTGCAGGTCCTCTTTCTTTTCTCTTCCATGTCCAGGTCTGATTCCTCCGCTTCCGATTC AGTGGATTGGATCAAGCTCA
Product: lipid A disaccharide synthetase-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MASALRVQVSPSAFFPYNLTSLPPAVMPDTSLAVVLVSNGPGELATWVRPIAESLHRSILMRPRAASSPVDLRLVLVPCP NATGQEADAARRWIQFEQITPANQFWNLLLFPRRYGPWPRQGVVVFLGGDQFWSVLLSGRLGYRHLTYAEWVARWPRWND CIAAMSPKVRDQLPRRFRERCTVVGDLMADLSCLARAEAPLPQGDWVALLPGSKRAKLCVGVPFLLEAADRLARLRPGCR FLLPVAPTTSVKELESFMSSSNPIAAAYRSAIAMVRPAELDQPWRRLITRAGTVIYLQEDHPAHGPLSQCDLALTTVGAN TAELGALGLPMIVIVPTQHLAVMQAWDGWIGLLARLPGLRWCIGVLLSAWRLRRHGFLAWPNISAGRMVVPERVGSISPQ DIANEASAWLESPERLRGLREDLRSLRGQPGAVSALVQQVRRLLPKALGAF
Sequences:
>Translated_451_residues MASALRVQVSPSAFFPYNLTSLPPAVMPDTSLAVVLVSNGPGELATWVRPIAESLHRSILMRPRAASSPVDLRLVLVPCP NATGQEADAARRWIQFEQITPANQFWNLLLFPRRYGPWPRQGVVVFLGGDQFWSVLLSGRLGYRHLTYAEWVARWPRWND CIAAMSPKVRDQLPRRFRERCTVVGDLMADLSCLARAEAPLPQGDWVALLPGSKRAKLCVGVPFLLEAADRLARLRPGCR FLLPVAPTTSVKELESFMSSSNPIAAAYRSAIAMVRPAELDQPWRRLITRAGTVIYLQEDHPAHGPLSQCDLALTTVGAN TAELGALGLPMIVIVPTQHLAVMQAWDGWIGLLARLPGLRWCIGVLLSAWRLRRHGFLAWPNISAGRMVVPERVGSISPQ DIANEASAWLESPERLRGLREDLRSLRGQPGAVSALVQQVRRLLPKALGAF >Mature_450_residues ASALRVQVSPSAFFPYNLTSLPPAVMPDTSLAVVLVSNGPGELATWVRPIAESLHRSILMRPRAASSPVDLRLVLVPCPN ATGQEADAARRWIQFEQITPANQFWNLLLFPRRYGPWPRQGVVVFLGGDQFWSVLLSGRLGYRHLTYAEWVARWPRWNDC IAAMSPKVRDQLPRRFRERCTVVGDLMADLSCLARAEAPLPQGDWVALLPGSKRAKLCVGVPFLLEAADRLARLRPGCRF LLPVAPTTSVKELESFMSSSNPIAAAYRSAIAMVRPAELDQPWRRLITRAGTVIYLQEDHPAHGPLSQCDLALTTVGANT AELGALGLPMIVIVPTQHLAVMQAWDGWIGLLARLPGLRWCIGVLLSAWRLRRHGFLAWPNISAGRMVVPERVGSISPQD IANEASAWLESPERLRGLREDLRSLRGQPGAVSALVQQVRRLLPKALGAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49810; Mature: 49678
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASALRVQVSPSAFFPYNLTSLPPAVMPDTSLAVVLVSNGPGELATWVRPIAESLHRSIL CCCCEEEEECCCEECCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH MRPRAASSPVDLRLVLVPCPNATGQEADAARRWIQFEQITPANQFWNLLLFPRRYGPWPR CCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHEEECCCCCCCCC QGVVVFLGGDQFWSVLLSGRLGYRHLTYAEWVARWPRWNDCIAAMSPKVRDQLPRRFRER CCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHH CTVVGDLMADLSCLARAEAPLPQGDWVALLPGSKRAKLCVGVPFLLEAADRLARLRPGCR HHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCEEEECCHHHHHHHHHHHHHCCCCE FLLPVAPTTSVKELESFMSSSNPIAAAYRSAIAMVRPAELDQPWRRLITRAGTVIYLQED EEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECC HPAHGPLSQCDLALTTVGANTAELGALGLPMIVIVPTQHLAVMQAWDGWIGLLARLPGLR CCCCCCHHHHCEEEEECCCCHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCHHH WCIGVLLSAWRLRRHGFLAWPNISAGRMVVPERVGSISPQDIANEASAWLESPERLRGLR HHHHHHHHHHHHHHCCEEECCCCCCCCEECHHHHCCCCHHHHHHHHHHHHCCHHHHHHHH EDLRSLRGQPGAVSALVQQVRRLLPKALGAF HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ASALRVQVSPSAFFPYNLTSLPPAVMPDTSLAVVLVSNGPGELATWVRPIAESLHRSIL CCCEEEEECCCEECCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH MRPRAASSPVDLRLVLVPCPNATGQEADAARRWIQFEQITPANQFWNLLLFPRRYGPWPR CCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHEEECCCCCCCCC QGVVVFLGGDQFWSVLLSGRLGYRHLTYAEWVARWPRWNDCIAAMSPKVRDQLPRRFRER CCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHH CTVVGDLMADLSCLARAEAPLPQGDWVALLPGSKRAKLCVGVPFLLEAADRLARLRPGCR HHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCEEEECCHHHHHHHHHHHHHCCCCE FLLPVAPTTSVKELESFMSSSNPIAAAYRSAIAMVRPAELDQPWRRLITRAGTVIYLQED EEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECC HPAHGPLSQCDLALTTVGANTAELGALGLPMIVIVPTQHLAVMQAWDGWIGLLARLPGLR CCCCCCHHHHCEEEEECCCCHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCHHH WCIGVLLSAWRLRRHGFLAWPNISAGRMVVPERVGSISPQDIANEASAWLESPERLRGLR HHHHHHHHHHHHHHCCEEECCCCCCCCEECHHHHCCCCHHHHHHHHHHHHCCHHHHHHHH EDLRSLRGQPGAVSALVQQVRRLLPKALGAF HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA