Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

Click here to switch to the map view.

The map label for this gene is 124022032

Identifier: 124022032

GI number: 124022032

Start: 332104

End: 332463

Strand: Direct

Name: 124022032

Synonym: P9303_03211

Alternate gene names: NA

Gene position: 332104-332463 (Clockwise)

Preceding gene: 124022027

Following gene: 124022034

Centisome position: 12.38

GC content: 51.94

Gene sequence:

>360_bases
GTGACTTTCTACGATGGAACTGCTGATGCTTTGAGCTTTGTGACACCAGTTCTGATTCAAGCGCTGCCAACGCTGCATCT
GGTTCTGGCCTTTGCGCTTGCGTTTTGGACGCTGACATTTATTTTTCGGATCGTGCTCTCTTGGTATCCCCAGGTAAAGC
TCAGCGAGGGGTTTTGGCCTTTGGTGAGTTGGCCTACGGAGCCTCTTTTGGCGATGACCCGCCGTGTGGTGGCTCCTATT
GGTGGAGTTGATGTCACTCCAGTGATATGGGCTGGATTGATCAGTTTGTTGAGGGAGTTGTTGGTTGGCCAGCAAGGACT
GCTCTCTCAGATGCTGCTTAAGAGCCAGGCCATTGCTTGA

Upstream 100 bases:

>100_bases
TACTGCGGCCCAAACGAGGCTGCTTAGATAATTTGCGAGAGAAGCGGTCATAGCAGTGGTTCTGACTTGGGCGAGGCCAT
CATGATCTTAATGATCAGGG

Downstream 100 bases:

>100_bases
GATAGAGCGAAGGAATTTCAAAGGAATTTCAGTCGAGCATGTCCTGTTCGACAAATTTGGTGTGAACATCTCCTCTAAGA
AATTCTTCCCGATTGAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MTFYDGTADALSFVTPVLIQALPTLHLVLAFALAFWTLTFIFRIVLSWYPQVKLSEGFWPLVSWPTEPLLAMTRRVVAPI
GGVDVTPVIWAGLISLLRELLVGQQGLLSQMLLKSQAIA

Sequences:

>Translated_119_residues
MTFYDGTADALSFVTPVLIQALPTLHLVLAFALAFWTLTFIFRIVLSWYPQVKLSEGFWPLVSWPTEPLLAMTRRVVAPI
GGVDVTPVIWAGLISLLRELLVGQQGLLSQMLLKSQAIA
>Mature_118_residues
TFYDGTADALSFVTPVLIQALPTLHLVLAFALAFWTLTFIFRIVLSWYPQVKLSEGFWPLVSWPTEPLLAMTRRVVAPIG
GVDVTPVIWAGLISLLRELLVGQQGLLSQMLLKSQAIA

Specific function: Unknown

COG id: COG0762

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13168; Mature: 13037

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFYDGTADALSFVTPVLIQALPTLHLVLAFALAFWTLTFIFRIVLSWYPQVKLSEGFWP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
LVSWPTEPLLAMTRRVVAPIGGVDVTPVIWAGLISLLRELLVGQQGLLSQMLLKSQAIA
CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TFYDGTADALSFVTPVLIQALPTLHLVLAFALAFWTLTFIFRIVLSWYPQVKLSEGFWP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
LVSWPTEPLLAMTRRVVAPIGGVDVTPVIWAGLISLLRELLVGQQGLLSQMLLKSQAIA
CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA