The gene/protein map for NC_008820 is currently unavailable.
Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

Click here to switch to the map view.

The map label for this gene is 124021928

Identifier: 124021928

GI number: 124021928

Start: 231347

End: 232582

Strand: Reverse

Name: 124021928

Synonym: P9303_02151

Alternate gene names: NA

Gene position: 232582-231347 (Counterclockwise)

Preceding gene: 124021929

Following gene: 124021926

Centisome position: 8.67

GC content: 54.77

Gene sequence:

>1236_bases
GTGAGTCCATTCCCCTGTTTGCGAGCCCATCAACGCAACATCTTTCTGACAGCCTCTGGCATCAGTACAGCAGGCTCGTT
CGCTGGAATGACTGCAAAAGGCTGGATCCTCATGGACGGCACCAACAATCCAATGTTGCTTGCCGCCCACTTCGCCGCCC
TTTCCCTGCCAACCCTGCTGGTCAGTGGAGCAGCAGGTGCCTACACAGACCGATTCGGCTGTGAACGGGTTCTTGTGCAA
GCCCAGTGGGGCCTTTTAGCAGCTGCGTTACTGGGAGCAGTGGCCATTCCTCTGATGACAGGAACCGCGCTCGTAACAAT
GCTATTAACCAGCACGTTGCTTGTCGGGATAGCGAGTGCTTACGAACTCACTGCCCGCAATAAATACTGCGCCCTATTGA
TCGACGAGCCCAATCAACTGGCCCCCTATCTCTCTAGTTTTGCGGTTGTGTTCAACGTAGGCAAACTCCTTGGGCCTCCC
ATAGGAGGATGGTTACTGGTCATCACAGGACCTGCTGCTGCTCTCAGCATTGATGCCGCGAGTTACTTGCTACCGATCGC
CAGTCTCCTCTGGTTACTAGATCCAAACCGAAGCCAAGAACAACGCAGCGTTCCGGGTAAGCAATCAACAATGCTCTATG
CATGGCACAACAGCGGCTCTTCGCTTCGACATGTGCTGGGCTTCACCGCAACACTCTGCTTGGTAGGTTTTTTCCACCCT
GGTCTAGCCCCTCTAATCGCCGACCAGGTATTGGGTTCAGATCCAAGAGATCTTGGAGTGTTCACCAGCGTGCTTGCAGC
AGGGAGCATTGCTGGGGGGGTGGTACTACAACGCAATAGCCAACGATTCTGTAGACGCCCATTTCTGACTCTGAGTGGGT
TCGCTCTCATCACTGCCATCGCCCAATTGGGAATGGCTCAAACTGAAAACACGCCACTAGCATTCAGCCTCACAATGACC
CTGCTGATTGGAGCTGGTACTGCAGGCCTATTGAGCAGCTGCAACATGATCACCCAAGTGGGGTCCCCTCAGGTCTTGCG
TGGGCGCATGGCAGGGCTAAGTCAAATCGCCTTCCTTGGGGGAGGAGGGCTAAGTGGCCTTCTTGCCGCTCAGATGGTGA
TTTCAACGAGCTTATCCACGACCTTCGCCACCGCAGGTGGAATCGGACTTGGCCTAGCCCTCTGGGGATTCTGGCAAAAA
GGCAGAACCGTACTAGAGGAGGTCAGATCAGCTTGA

Upstream 100 bases:

>100_bases
GAACGATGGTTCCTGTCTTCATTACCGGCTCTGATGTCTATGACCTCACCGGCCAGCTGGTGGACACCAACGCCATGGCG
GTCACAGCCCAGACGTCTCA

Downstream 100 bases:

>100_bases
TGCCTTTAAGAACCTTGGTTAGTGCGAATGCCGCCACCAAGCCAACTGCGACGAACACCAAATAAAAAACGACGCCCATG
TGCAACAAATCAGGTGAACA

Product: major facilitator superfamily multidrug-efflux transporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Facilitator Transporter; Facilitator Superfamily Multidrug-Efflux Transporter; Facilitator Superfamily Permease; Arabinose Efflux Permease; Macrolide-Efflux Protein; Permeases Of Facilitator Superfamily

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MSPFPCLRAHQRNIFLTASGISTAGSFAGMTAKGWILMDGTNNPMLLAAHFAALSLPTLLVSGAAGAYTDRFGCERVLVQ
AQWGLLAAALLGAVAIPLMTGTALVTMLLTSTLLVGIASAYELTARNKYCALLIDEPNQLAPYLSSFAVVFNVGKLLGPP
IGGWLLVITGPAAALSIDAASYLLPIASLLWLLDPNRSQEQRSVPGKQSTMLYAWHNSGSSLRHVLGFTATLCLVGFFHP
GLAPLIADQVLGSDPRDLGVFTSVLAAGSIAGGVVLQRNSQRFCRRPFLTLSGFALITAIAQLGMAQTENTPLAFSLTMT
LLIGAGTAGLLSSCNMITQVGSPQVLRGRMAGLSQIAFLGGGGLSGLLAAQMVISTSLSTTFATAGGIGLGLALWGFWQK
GRTVLEEVRSA

Sequences:

>Translated_411_residues
MSPFPCLRAHQRNIFLTASGISTAGSFAGMTAKGWILMDGTNNPMLLAAHFAALSLPTLLVSGAAGAYTDRFGCERVLVQ
AQWGLLAAALLGAVAIPLMTGTALVTMLLTSTLLVGIASAYELTARNKYCALLIDEPNQLAPYLSSFAVVFNVGKLLGPP
IGGWLLVITGPAAALSIDAASYLLPIASLLWLLDPNRSQEQRSVPGKQSTMLYAWHNSGSSLRHVLGFTATLCLVGFFHP
GLAPLIADQVLGSDPRDLGVFTSVLAAGSIAGGVVLQRNSQRFCRRPFLTLSGFALITAIAQLGMAQTENTPLAFSLTMT
LLIGAGTAGLLSSCNMITQVGSPQVLRGRMAGLSQIAFLGGGGLSGLLAAQMVISTSLSTTFATAGGIGLGLALWGFWQK
GRTVLEEVRSA
>Mature_410_residues
SPFPCLRAHQRNIFLTASGISTAGSFAGMTAKGWILMDGTNNPMLLAAHFAALSLPTLLVSGAAGAYTDRFGCERVLVQA
QWGLLAAALLGAVAIPLMTGTALVTMLLTSTLLVGIASAYELTARNKYCALLIDEPNQLAPYLSSFAVVFNVGKLLGPPI
GGWLLVITGPAAALSIDAASYLLPIASLLWLLDPNRSQEQRSVPGKQSTMLYAWHNSGSSLRHVLGFTATLCLVGFFHPG
LAPLIADQVLGSDPRDLGVFTSVLAAGSIAGGVVLQRNSQRFCRRPFLTLSGFALITAIAQLGMAQTENTPLAFSLTMTL
LIGAGTAGLLSSCNMITQVGSPQVLRGRMAGLSQIAFLGGGGLSGLLAAQMVISTSLSTTFATAGGIGLGLALWGFWQKG
RTVLEEVRSA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42739; Mature: 42607

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPFPCLRAHQRNIFLTASGISTAGSFAGMTAKGWILMDGTNNPMLLAAHFAALSLPTLL
CCCCCCCHHCCCCEEEEECCCCCCCCCCCCEECCEEEEECCCCCEEEEHHHHHHHHHHHH
VSGAAGAYTDRFGCERVLVQAQWGLLAAALLGAVAIPLMTGTALVTMLLTSTLLVGIASA
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YELTARNKYCALLIDEPNQLAPYLSSFAVVFNVGKLLGPPIGGWLLVITGPAAALSIDAA
HHEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEHHHH
SYLLPIASLLWLLDPNRSQEQRSVPGKQSTMLYAWHNSGSSLRHVLGFTATLCLVGFFHP
HHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCC
GLAPLIADQVLGSDPRDLGVFTSVLAAGSIAGGVVLQRNSQRFCRRPFLTLSGFALITAI
CHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHCCCHHHHHHHHHHHH
AQLGMAQTENTPLAFSLTMTLLIGAGTAGLLSSCNMITQVGSPQVLRGRMAGLSQIAFLG
HHHCCCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHCHHHEEEEC
GGGLSGLLAAQMVISTSLSTTFATAGGIGLGLALWGFWQKGRTVLEEVRSA
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SPFPCLRAHQRNIFLTASGISTAGSFAGMTAKGWILMDGTNNPMLLAAHFAALSLPTLL
CCCCCCHHCCCCEEEEECCCCCCCCCCCCEECCEEEEECCCCCEEEEHHHHHHHHHHHH
VSGAAGAYTDRFGCERVLVQAQWGLLAAALLGAVAIPLMTGTALVTMLLTSTLLVGIASA
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YELTARNKYCALLIDEPNQLAPYLSSFAVVFNVGKLLGPPIGGWLLVITGPAAALSIDAA
HHEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEHHHH
SYLLPIASLLWLLDPNRSQEQRSVPGKQSTMLYAWHNSGSSLRHVLGFTATLCLVGFFHP
HHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCC
GLAPLIADQVLGSDPRDLGVFTSVLAAGSIAGGVVLQRNSQRFCRRPFLTLSGFALITAI
CHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHCCCHHHHHHHHHHHH
AQLGMAQTENTPLAFSLTMTLLIGAGTAGLLSSCNMITQVGSPQVLRGRMAGLSQIAFLG
HHHCCCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHCHHHEEEEC
GGGLSGLLAAQMVISTSLSTTFATAGGIGLGLALWGFWQKGRTVLEEVRSA
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA