Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is 124021926

Identifier: 124021926

GI number: 124021926

Start: 229542

End: 231116

Strand: Reverse

Name: 124021926

Synonym: P9303_02131

Alternate gene names: NA

Gene position: 231116-229542 (Counterclockwise)

Preceding gene: 124021928

Following gene: 124021918

Centisome position: 8.62

GC content: 51.62

Gene sequence:

>1575_bases
ATGCGCACTCTCTTTATCTACCCAAAGTTCCCCAAAACATTCTGGAGCTACGAGAAGATCCTCGAGCTGGTGAACCGCAA
GGTGCTACTTCCACCTCTCGGACTAGTCACCGTGGCAGCCCTGCTGCCTCAAGAATGGGAGATGAAGCTCGTTGATCGCA
ACGTCCGAGAACTCAGCGAAGCCGAGTGGCAATGGGCCGAGCTTGTTGTGATCTCCGGGATGATCGTTCAAAAAGACGAC
ATGCAGCGGCAAATCGCTGAGGCCAAACGACGTGGTCTTTCGGTTGCTGTGGGAGGTCCATTCGCCAGCTCTACGCCAGA
AGCTCCTGAAATCGATCTAGCAGATTTCAAGGTGCTGGATGAAGGAGAGATCACCCTGCCAATGTTTGTAGAGGCCATTC
AACGCGGTGAAACTAGCGGCCGCTTCAGCGCTGAAGGGGACAAGCCGGATGTGACCTCAACTCCCATCCCCCGCTTCGAC
CTACTAGAGCTGGATGCCTACGACTCCATGTCCGTTCAGTTCTCAAGGGGTTGTCCATTCAATTGCGAGTTCTGCGACAT
CATCGTGCTGTATGGGCGCAAACCACGTACGAAAACACCAGAGCAATTAATTGCCGAGCTTCAGTCGATTTACGACTTGG
GCTGGCGACGCTCGATCTTTCTTGTGGATGACAACTTCATCGGCAATAAACGCAATGCCAAGTTGTTACTGCCAGCCATT
CGACAATGGCAGGAAGAAAAAGGCTATCCCTTTAGTTTCGCCACTGAAGCTTCTGTAGATCTCGCCGATGACGATGAGAT
GATGCGAATGATGCACGAAGCGCGTTTCGAAAGTGTTTTCTTGGGGATTGAAACACCTGATGAGGCCAGTCTAGAAACAG
CTAGAAAAATTCAAAACACACGTCATCCTCTCGATGAAGCTGTCGACAAGATCACCGCAAATGGGATCCGCGTGATGGCA
GGCTTCATCATCGGATTTGATGGTGAAAAAGATGGAGCAGGAGCTCGGATTGTTGATTTCGTAACCCGCACTGGCATCCC
CGCCGCAATGATGGGAATGCTCCAGGCCTTGCCAAACACAGCCCTATGGCATCGACTAGAGAAAGAGGGTCGCCTGATTG
AGGACAAGGATGCTGCCAAAGGAGTCAATCAAACCAATCTGCTGAACTTCCAGCCCACCAGACCCATCCGAGACATCGCC
AACGAATACGTCGAGGCCTTCTGTGCTCTTTATGAGCCCAACGCCTATATGGATCGCGTCTACTCCTACTACCTAAAAAT
GGGAGCTCCTCGTTGGCAAGGGACAGCAACATTACCCAGCTGGATCGATCTTCGCGCTCTAGCCATTGTCATCTGGAGAC
AAGGCCTCAAACGCAACACCCGCAGCCGTTTCTGGCGCTACATGCTGGGCATGGCACGAAACAATCCAGCCATGCTTGAA
CAGTTCTTAGTTGTACTGGCCCACAACGAACATTTCATGGAATACCGATCCATTGTGCAGCGAGAGATTCGCGAACAACT
TGAATCAATTCCACCAGAAGAGCCCAGCCCCAAAAAAACTTTGCAACCTGTCTGA

Upstream 100 bases:

>100_bases
CTCAAAGCGCCTAAGGTTTCAGCAATTCCCTATCCAACACTCGGAGAGGTTTCAGCCCCGAGTCGACCTTCCACATCTCT
TCTCTGTCGCATAGATCTGC

Downstream 100 bases:

>100_bases
ATTGAACCTCAAAGCTCAATCTTGAACATAAGGCGTACCGCTGAGAAGACAGCTCTCAGCGCGTTGCAGTTCCCGCCCCA
AATAAAGAGCATGATCAAGC

Product: Fe-S oxidoreductase

Products: NA

Alternate protein names: ORF N [H]

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MRTLFIYPKFPKTFWSYEKILELVNRKVLLPPLGLVTVAALLPQEWEMKLVDRNVRELSEAEWQWAELVVISGMIVQKDD
MQRQIAEAKRRGLSVAVGGPFASSTPEAPEIDLADFKVLDEGEITLPMFVEAIQRGETSGRFSAEGDKPDVTSTPIPRFD
LLELDAYDSMSVQFSRGCPFNCEFCDIIVLYGRKPRTKTPEQLIAELQSIYDLGWRRSIFLVDDNFIGNKRNAKLLLPAI
RQWQEEKGYPFSFATEASVDLADDDEMMRMMHEARFESVFLGIETPDEASLETARKIQNTRHPLDEAVDKITANGIRVMA
GFIIGFDGEKDGAGARIVDFVTRTGIPAAMMGMLQALPNTALWHRLEKEGRLIEDKDAAKGVNQTNLLNFQPTRPIRDIA
NEYVEAFCALYEPNAYMDRVYSYYLKMGAPRWQGTATLPSWIDLRALAIVIWRQGLKRNTRSRFWRYMLGMARNNPAMLE
QFLVVLAHNEHFMEYRSIVQREIREQLESIPPEEPSPKKTLQPV

Sequences:

>Translated_524_residues
MRTLFIYPKFPKTFWSYEKILELVNRKVLLPPLGLVTVAALLPQEWEMKLVDRNVRELSEAEWQWAELVVISGMIVQKDD
MQRQIAEAKRRGLSVAVGGPFASSTPEAPEIDLADFKVLDEGEITLPMFVEAIQRGETSGRFSAEGDKPDVTSTPIPRFD
LLELDAYDSMSVQFSRGCPFNCEFCDIIVLYGRKPRTKTPEQLIAELQSIYDLGWRRSIFLVDDNFIGNKRNAKLLLPAI
RQWQEEKGYPFSFATEASVDLADDDEMMRMMHEARFESVFLGIETPDEASLETARKIQNTRHPLDEAVDKITANGIRVMA
GFIIGFDGEKDGAGARIVDFVTRTGIPAAMMGMLQALPNTALWHRLEKEGRLIEDKDAAKGVNQTNLLNFQPTRPIRDIA
NEYVEAFCALYEPNAYMDRVYSYYLKMGAPRWQGTATLPSWIDLRALAIVIWRQGLKRNTRSRFWRYMLGMARNNPAMLE
QFLVVLAHNEHFMEYRSIVQREIREQLESIPPEEPSPKKTLQPV
>Mature_524_residues
MRTLFIYPKFPKTFWSYEKILELVNRKVLLPPLGLVTVAALLPQEWEMKLVDRNVRELSEAEWQWAELVVISGMIVQKDD
MQRQIAEAKRRGLSVAVGGPFASSTPEAPEIDLADFKVLDEGEITLPMFVEAIQRGETSGRFSAEGDKPDVTSTPIPRFD
LLELDAYDSMSVQFSRGCPFNCEFCDIIVLYGRKPRTKTPEQLIAELQSIYDLGWRRSIFLVDDNFIGNKRNAKLLLPAI
RQWQEEKGYPFSFATEASVDLADDDEMMRMMHEARFESVFLGIETPDEASLETARKIQNTRHPLDEAVDKITANGIRVMA
GFIIGFDGEKDGAGARIVDFVTRTGIPAAMMGMLQALPNTALWHRLEKEGRLIEDKDAAKGVNQTNLLNFQPTRPIRDIA
NEYVEAFCALYEPNAYMDRVYSYYLKMGAPRWQGTATLPSWIDLRALAIVIWRQGLKRNTRSRFWRYMLGMARNNPAMLE
QFLVVLAHNEHFMEYRSIVQREIREQLESIPPEEPSPKKTLQPV

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 59956; Mature: 59956

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLFIYPKFPKTFWSYEKILELVNRKVLLPPLGLVTVAALLPQEWEMKLVDRNVRELSE
CCEEEEECCCCHHHHHHHHHHHHHCCEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH
AEWQWAELVVISGMIVQKDDMQRQIAEAKRRGLSVAVGGPFASSTPEAPEIDLADFKVLD
HHHHHHHHHHHHCEEECHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHEEEEC
EGEITLPMFVEAIQRGETSGRFSAEGDKPDVTSTPIPRFDLLELDAYDSMSVQFSRGCPF
CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCC
NCEFCDIIVLYGRKPRTKTPEQLIAELQSIYDLGWRRSIFLVDDNFIGNKRNAKLLLPAI
CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEHHHH
RQWQEEKGYPFSFATEASVDLADDDEMMRMMHEARFESVFLGIETPDEASLETARKIQNT
HHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHC
RHPLDEAVDKITANGIRVMAGFIIGFDGEKDGAGARIVDFVTRTGIPAAMMGMLQALPNT
CCCHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCH
ALWHRLEKEGRLIEDKDAAKGVNQTNLLNFQPTRPIRDIANEYVEAFCALYEPNAYMDRV
HHHHHHHHCCCEECCCHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH
YSYYLKMGAPRWQGTATLPSWIDLRALAIVIWRQGLKRNTRSRFWRYMLGMARNNPAMLE
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHH
QFLVVLAHNEHFMEYRSIVQREIREQLESIPPEEPSPKKTLQPV
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRTLFIYPKFPKTFWSYEKILELVNRKVLLPPLGLVTVAALLPQEWEMKLVDRNVRELSE
CCEEEEECCCCHHHHHHHHHHHHHCCEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH
AEWQWAELVVISGMIVQKDDMQRQIAEAKRRGLSVAVGGPFASSTPEAPEIDLADFKVLD
HHHHHHHHHHHHCEEECHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHEEEEC
EGEITLPMFVEAIQRGETSGRFSAEGDKPDVTSTPIPRFDLLELDAYDSMSVQFSRGCPF
CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCC
NCEFCDIIVLYGRKPRTKTPEQLIAELQSIYDLGWRRSIFLVDDNFIGNKRNAKLLLPAI
CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEHHHH
RQWQEEKGYPFSFATEASVDLADDDEMMRMMHEARFESVFLGIETPDEASLETARKIQNT
HHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHC
RHPLDEAVDKITANGIRVMAGFIIGFDGEKDGAGARIVDFVTRTGIPAAMMGMLQALPNT
CCCHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCH
ALWHRLEKEGRLIEDKDAAKGVNQTNLLNFQPTRPIRDIANEYVEAFCALYEPNAYMDRV
HHHHHHHHCCCEECCCHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH
YSYYLKMGAPRWQGTATLPSWIDLRALAIVIWRQGLKRNTRSRFWRYMLGMARNNPAMLE
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHH
QFLVVLAHNEHFMEYRSIVQREIREQLESIPPEEPSPKKTLQPV
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231; 8467083 [H]