| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124021829
Identifier: 124021829
GI number: 124021829
Start: 115751
End: 116749
Strand: Reverse
Name: 124021829
Synonym: P9303_01161
Alternate gene names: NA
Gene position: 116749-115751 (Counterclockwise)
Preceding gene: 124021830
Following gene: 124021828
Centisome position: 4.35
GC content: 35.34
Gene sequence:
>999_bases ATGAAATCAAAAAGAGTAGTTGCAAGGGTCTTAGTTTGTGGACTAGGAAGTATAGGGAAACAACATATTAAAGTCATTAA GAAGTATTGGCCTAGCATAGAGATAGCAATTCTTAGATCATCAGAGAAAAGGGTGAATGATGAGTTTAGCAATGGCCTTC TAAGCTTTGGCAAAATAGATGAAGCGGCTAAATGGAAACCTAATGCGGCTATCATCTCTAGTCCGTCTATATTGCACGTA AAACAAGCTATTTACCTTTCAAAACATGAAATACCTGTTTTAATAGAAAAGCCGTTAAGTGATGGTAATGAATCTAGAGA AGAGATAGAAGAGTTAATAAGTCTTTCCAAGACAATACCCATTCTTGTAGGATATCTTTTACGATTTGATCCTTGTGCAG AATATTTAAAAGAAATAATTGAGAAAGAAAACCTTGGGAAAATATTAGAAGTTGATTTTTATTGTGGCTCCTGGTTGCCT GATTGGAGAACTGCAGATGGATACGAAAAATCTGTATCAGCAAGAAGAGATCTTGGAGGAGGTGTATTGCTAGAGCTGAG TCATGAAATAGACTTGGCCATATGGCTTTTAAAGTTAATAGACTTAGAAAAATCAATATTAAAGAATTCAGGATTACTTA ATGTAGATGTAGAGGATTATGCGTTTCTATTATTTAAAAGCCATAAGGAGGCAGTGGTTTCCTTAAGACTTAACTTTTGC ACTCAGTCATTAAAGAGAAGTGTTACAATACAAGGGGAGAAGGGAATGGTTCAATGGGATATTTTGAAGGGCAAGATATT GGTTGAGTCAAGGCATGGCACCAGAGATTTAATGACTATAGGAGTAAAGCATGATGAGAGATTGAGGCGACAATTTCAGA ATTTTATTGATTGTATAGATGGAGAGAGCTCTCCAATATGCACAGTTGAAGATGGGGTAGAAGTTTTAAAAGTAATCAAA GAGGCAAAATTAATGGCAAGTATATATGGTGAGATTTAG
Upstream 100 bases:
>100_bases TCACTGTTTACCCTATTCATGAATATTGGTTAGACGTAGGAAGACCAGAGAGTCTAGAAGAGGCTCATGCGACCTGGGAA GAATTAAAGTGAATAGTAAT
Downstream 100 bases:
>100_bases GATGAATGGATCTACTCATGCTTTTATATTTGCAAGAGGTGGTTCTAAAGGACTTCCAGGGAAGAATATAATGAAAATTA GTGGAATACCTCTTATAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Oxidoreductase Domain-Containing Protein; Oxidoreductase Domain Protein; Dehydrogenase; Oxidoreductase-Like; Oxidoreductase-Like Protein; Dehydrogenase-Like Protein; Oxidoreductase Gfo/Idh/MocA Family; NADH-Dependent Dyhydrogenase; Myo-Inositol 2-Dehydrogenase; Oxidoreductase Family Protein; 3-Chlorobenzoate-3 4-Dioxygenase Dyhydrogenase; Flagellin Protein PtmF; Oxidoreductase GFO/Idh/MocA Family Protein; NAD-Dependent Dehydrogenase; GFO/IDH/MOCA Family Oxidoreductase; GFO/IDH/MOCA Family Oxidoreductase Protein; NAD/P Oxidoreductase
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MKSKRVVARVLVCGLGSIGKQHIKVIKKYWPSIEIAILRSSEKRVNDEFSNGLLSFGKIDEAAKWKPNAAIISSPSILHV KQAIYLSKHEIPVLIEKPLSDGNESREEIEELISLSKTIPILVGYLLRFDPCAEYLKEIIEKENLGKILEVDFYCGSWLP DWRTADGYEKSVSARRDLGGGVLLELSHEIDLAIWLLKLIDLEKSILKNSGLLNVDVEDYAFLLFKSHKEAVVSLRLNFC TQSLKRSVTIQGEKGMVQWDILKGKILVESRHGTRDLMTIGVKHDERLRRQFQNFIDCIDGESSPICTVEDGVEVLKVIK EAKLMASIYGEI
Sequences:
>Translated_332_residues MKSKRVVARVLVCGLGSIGKQHIKVIKKYWPSIEIAILRSSEKRVNDEFSNGLLSFGKIDEAAKWKPNAAIISSPSILHV KQAIYLSKHEIPVLIEKPLSDGNESREEIEELISLSKTIPILVGYLLRFDPCAEYLKEIIEKENLGKILEVDFYCGSWLP DWRTADGYEKSVSARRDLGGGVLLELSHEIDLAIWLLKLIDLEKSILKNSGLLNVDVEDYAFLLFKSHKEAVVSLRLNFC TQSLKRSVTIQGEKGMVQWDILKGKILVESRHGTRDLMTIGVKHDERLRRQFQNFIDCIDGESSPICTVEDGVEVLKVIK EAKLMASIYGEI >Mature_332_residues MKSKRVVARVLVCGLGSIGKQHIKVIKKYWPSIEIAILRSSEKRVNDEFSNGLLSFGKIDEAAKWKPNAAIISSPSILHV KQAIYLSKHEIPVLIEKPLSDGNESREEIEELISLSKTIPILVGYLLRFDPCAEYLKEIIEKENLGKILEVDFYCGSWLP DWRTADGYEKSVSARRDLGGGVLLELSHEIDLAIWLLKLIDLEKSILKNSGLLNVDVEDYAFLLFKSHKEAVVSLRLNFC TQSLKRSVTIQGEKGMVQWDILKGKILVESRHGTRDLMTIGVKHDERLRRQFQNFIDCIDGESSPICTVEDGVEVLKVIK EAKLMASIYGEI
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37505; Mature: 37505
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKRVVARVLVCGLGSIGKQHIKVIKKYWPSIEIAILRSSEKRVNDEFSNGLLSFGKID CCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCCCCCCCCC EAAKWKPNAAIISSPSILHVKQAIYLSKHEIPVLIEKPLSDGNESREEIEELISLSKTIP CCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHH ILVGYLLRFDPCAEYLKEIIEKENLGKILEVDFYCGSWLPDWRTADGYEKSVSARRDLGG HHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCC GVLLELSHEIDLAIWLLKLIDLEKSILKNSGLLNVDVEDYAFLLFKSHKEAVVSLRLNFC CEEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHEEEEHHCCHHHHHHHHHHHH TQSLKRSVTIQGEKGMVQWDILKGKILVESRHGTRDLMTIGVKHDERLRRQFQNFIDCID HHHHHCCEEEECCCCEEEEEEEECEEEEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHC GESSPICTVEDGVEVLKVIKEAKLMASIYGEI CCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKSKRVVARVLVCGLGSIGKQHIKVIKKYWPSIEIAILRSSEKRVNDEFSNGLLSFGKID CCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCCCCCCCCC EAAKWKPNAAIISSPSILHVKQAIYLSKHEIPVLIEKPLSDGNESREEIEELISLSKTIP CCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHH ILVGYLLRFDPCAEYLKEIIEKENLGKILEVDFYCGSWLPDWRTADGYEKSVSARRDLGG HHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCC GVLLELSHEIDLAIWLLKLIDLEKSILKNSGLLNVDVEDYAFLLFKSHKEAVVSLRLNFC CEEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHEEEEHHCCHHHHHHHHHHHH TQSLKRSVTIQGEKGMVQWDILKGKILVESRHGTRDLMTIGVKHDERLRRQFQNFIDCID HHHHHCCEEEECCCCEEEEEEEECEEEEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHC GESSPICTVEDGVEVLKVIKEAKLMASIYGEI CCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA