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The map label for this gene is ydaM [H]

Identifier: 124021778

GI number: 124021778

Start: 58653

End: 59984

Strand: Direct

Name: ydaM [H]

Synonym: P9303_00631

Alternate gene names: 124021778

Gene position: 58653-59984 (Clockwise)

Preceding gene: 124021777

Following gene: 124021786

Centisome position: 2.19

GC content: 53.38

Gene sequence:

>1332_bases
ATGGCCGCCGCCGCTGTCATTGGGGATCATCGACGCGGCAAGACAGCCCTGTTTTTGATTGCTTGCGGTTGGGCTGGTGC
AGCACCCCACCTTTGGCTGGAAGCAAGTAGAAGTCTTTTGCCTGCAATTACGCTGGCTTTTGTCTTGGGAGGGTATGGCC
TGCGCACGGTTTTGCGCGATCGGCAGCACTCGTCTGCCAATGCCAATGAAATAGGGCTTGAGCCCTCTGCTGAGTATGTC
TGGCCCAGTGTTGATGTTTTGGTCGCTGCCAGGGATGAGGAAGCTGTCGTTGATCGGTTGGTGGAACGTCTTGCCGGTCT
GAACTATCCCAAGGGCAAGCTGTCTACTTGGATTATTGATGATGGTAGTCAGGACCGAACGCCAGCTCTACTGGATGAGT
TGCAGCAGCAGTTTCCTTCTTTAAACGTGATTCATCGTCCTTCTGGAGCAGGCGGCGGAAAGTCTGGAGCTCTTAATGCA
GCACTCCAGCAGCTTCAGGGGGAATGGCTCTTGATTCTTGATGCTGATGCCCAGTTGCAGGATGACCTGCTCCAGCGTCT
GGTGTTATTTGCCCAACAGGGTGGGTGGTCTGCTGTGCAGTTGCGTAAGGCGGTGATCAACTCTCAGCACAATCTGCTCA
CCAGGGTTCAGGCGATGGAGATGGCTATGGATGCCTTGATTCAACAAGGACGCTTAGCGGGGGGAGGCGTGGTAGAGCTG
CGTGGAAATGGCCAGTTGATTCAACGCTCCACGCTGGAGGCTTGTGGGGGATTCAATGAAAATACGGTCACAGATGATCT
TGATCTGAGTTTCCGTTTACTTACAGCTGGAGCTTTGGTCGGGATTGTCTGGAACCCTCCAGTGCAGGAGGAGGCAGTGG
AGAGCTTGTCAGCTCTTTGGAGACAACGACAACGTTGGGCCGAGGGTGGATTGCAGCGATTTTTTGACTACTGGCCAGTC
TTGATGTCCAGCAAGTTAACTCTGGCTCAGCGTCGTGATTTGGCTTGTTTTTTCCTCCTTCAATACGCCCTCCCAGTGGT
GTCTTTCGCTGATCTGTTCACCACATTATTGACACGCACTATCCCAACCTATTGGCCTCTTTCGATCGTGGCCTTCAGCA
TTTCAGGGATGGCTTACTGGCGCGGTTGTAGGAGCATCAGTGATGGGCCTGCTTTGCCATCGCCAACCCCGTGGAATCTT
GTGGTGGCGATTACTTATTTGTCTCACTGGTTTGTGGTCATCCCTTGGGTCACAGTACGGATGGCACTGTTCCCGAAGAG
TTTGGTGTGGGCCAAGACCAGTCATCATGGCCAACAGCCTGTTCAGGTTTGA

Upstream 100 bases:

>100_bases
AACTGAACAGATTCTTAGTCATTACTACCCAGGAACGACCTATGGACCTTTGCCTGAGATGAAGGATGCCCCTTAGAGTC
GCTGGACTTCGGGTCTATGC

Downstream 100 bases:

>100_bases
ATGTTTAAAGGTCCACGTCCAGCACTTTGCCGTTGAAGAAGTCAGCTAGTCGCTTTGCTTTGCTGTCGATGGGTTCTAAA
GAGGAAGTGGGCTGAGTCGG

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 442

Protein sequence:

>443_residues
MAAAAVIGDHRRGKTALFLIACGWAGAAPHLWLEASRSLLPAITLAFVLGGYGLRTVLRDRQHSSANANEIGLEPSAEYV
WPSVDVLVAARDEEAVVDRLVERLAGLNYPKGKLSTWIIDDGSQDRTPALLDELQQQFPSLNVIHRPSGAGGGKSGALNA
ALQQLQGEWLLILDADAQLQDDLLQRLVLFAQQGGWSAVQLRKAVINSQHNLLTRVQAMEMAMDALIQQGRLAGGGVVEL
RGNGQLIQRSTLEACGGFNENTVTDDLDLSFRLLTAGALVGIVWNPPVQEEAVESLSALWRQRQRWAEGGLQRFFDYWPV
LMSSKLTLAQRRDLACFFLLQYALPVVSFADLFTTLLTRTIPTYWPLSIVAFSISGMAYWRGCRSISDGPALPSPTPWNL
VVAITYLSHWFVVIPWVTVRMALFPKSLVWAKTSHHGQQPVQV

Sequences:

>Translated_443_residues
MAAAAVIGDHRRGKTALFLIACGWAGAAPHLWLEASRSLLPAITLAFVLGGYGLRTVLRDRQHSSANANEIGLEPSAEYV
WPSVDVLVAARDEEAVVDRLVERLAGLNYPKGKLSTWIIDDGSQDRTPALLDELQQQFPSLNVIHRPSGAGGGKSGALNA
ALQQLQGEWLLILDADAQLQDDLLQRLVLFAQQGGWSAVQLRKAVINSQHNLLTRVQAMEMAMDALIQQGRLAGGGVVEL
RGNGQLIQRSTLEACGGFNENTVTDDLDLSFRLLTAGALVGIVWNPPVQEEAVESLSALWRQRQRWAEGGLQRFFDYWPV
LMSSKLTLAQRRDLACFFLLQYALPVVSFADLFTTLLTRTIPTYWPLSIVAFSISGMAYWRGCRSISDGPALPSPTPWNL
VVAITYLSHWFVVIPWVTVRMALFPKSLVWAKTSHHGQQPVQV
>Mature_442_residues
AAAAVIGDHRRGKTALFLIACGWAGAAPHLWLEASRSLLPAITLAFVLGGYGLRTVLRDRQHSSANANEIGLEPSAEYVW
PSVDVLVAARDEEAVVDRLVERLAGLNYPKGKLSTWIIDDGSQDRTPALLDELQQQFPSLNVIHRPSGAGGGKSGALNAA
LQQLQGEWLLILDADAQLQDDLLQRLVLFAQQGGWSAVQLRKAVINSQHNLLTRVQAMEMAMDALIQQGRLAGGGVVELR
GNGQLIQRSTLEACGGFNENTVTDDLDLSFRLLTAGALVGIVWNPPVQEEAVESLSALWRQRQRWAEGGLQRFFDYWPVL
MSSKLTLAQRRDLACFFLLQYALPVVSFADLFTTLLTRTIPTYWPLSIVAFSISGMAYWRGCRSISDGPALPSPTPWNLV
VAITYLSHWFVVIPWVTVRMALFPKSLVWAKTSHHGQQPVQV

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787259, Length=268, Percent_Identity=27.2388059701493, Blast_Score=92, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 48737; Mature: 48605

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAAAVIGDHRRGKTALFLIACGWAGAAPHLWLEASRSLLPAITLAFVLGGYGLRTVLRD
CCCCCEECCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
RQHSSANANEIGLEPSAEYVWPSVDVLVAARDEEAVVDRLVERLAGLNYPKGKLSTWIID
HCCCCCCCCCCCCCCCCCEECCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCEEEEEE
DGSQDRTPALLDELQQQFPSLNVIHRPSGAGGGKSGALNAALQQLQGEWLLILDADAQLQ
CCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHH
DDLLQRLVLFAQQGGWSAVQLRKAVINSQHNLLTRVQAMEMAMDALIQQGRLAGGGVVEL
HHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
RGNGQLIQRSTLEACGGFNENTVTDDLDLSFRLLTAGALVGIVWNPPVQEEAVESLSALW
CCCCCEEHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHEEEEEECCCCHHHHHHHHHHHH
RQRQRWAEGGLQRFFDYWPVLMSSKLTLAQRRDLACFFLLQYALPVVSFADLFTTLLTRT
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPTYWPLSIVAFSISGMAYWRGCRSISDGPALPSPTPWNLVVAITYLSHWFVVIPWVTVR
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
MALFPKSLVWAKTSHHGQQPVQV
HHHCCHHHHEEECCCCCCCCCCC
>Mature Secondary Structure 
AAAAVIGDHRRGKTALFLIACGWAGAAPHLWLEASRSLLPAITLAFVLGGYGLRTVLRD
CCCCEECCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
RQHSSANANEIGLEPSAEYVWPSVDVLVAARDEEAVVDRLVERLAGLNYPKGKLSTWIID
HCCCCCCCCCCCCCCCCCEECCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCEEEEEE
DGSQDRTPALLDELQQQFPSLNVIHRPSGAGGGKSGALNAALQQLQGEWLLILDADAQLQ
CCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHH
DDLLQRLVLFAQQGGWSAVQLRKAVINSQHNLLTRVQAMEMAMDALIQQGRLAGGGVVEL
HHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
RGNGQLIQRSTLEACGGFNENTVTDDLDLSFRLLTAGALVGIVWNPPVQEEAVESLSALW
CCCCCEEHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHEEEEEECCCCHHHHHHHHHHHH
RQRQRWAEGGLQRFFDYWPVLMSSKLTLAQRRDLACFFLLQYALPVVSFADLFTTLLTRT
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPTYWPLSIVAFSISGMAYWRGCRSISDGPALPSPTPWNLVVAITYLSHWFVVIPWVTVR
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
MALFPKSLVWAKTSHHGQQPVQV
HHHCCHHHHEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]