| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is asd [H]
Identifier: 124021786
GI number: 124021786
Start: 70114
End: 71145
Strand: Direct
Name: asd [H]
Synonym: P9303_00711
Alternate gene names: 124021786
Gene position: 70114-71145 (Clockwise)
Preceding gene: 124021778
Following gene: 124021787
Centisome position: 2.61
GC content: 53.88
Gene sequence:
>1032_bases TTGCTTCCCATATCGTTTTTTCCCGATCGTCCCCTCACAGTTGCTGTGCTTGGTGCCAGTGGCGCAGTGGGTCAGGAGCT GCTTCAGCTGCTGCAGGAACGCTCGTTTCCCATTGGTGAGTTGCGCTTATTGGCATCTGCGCGTTCTGCGGGCCATGTTC AAGCTTGGAATGGCTCCAGCCTCGTCGTTCAGGAGGTGAGCGAAGCTGCTTTTGAGGGGGTTGATTTGGTGCTGGCCTCA GCTGGTGGATCCGTATCGCGTCAGTGGCGGCAGGTGATCAACTCAGCCGGTGCGCTGATGATTGACAACTCCAGTGCCTT CAGGATGGATGCCGACGTGCCACTCGTGGTGCCAGAGGTCAATCCTGAGGCGGTTGCAGAGCATCAGGGGGTGATTGCAA ATCCGAATTGCACCACGATTTTGTTAACTCTGGTGCTGGCACCTTTGGCTGCAAGACGTGCTTTGCGTCGCGTTGTTGTC AGCACCTATCAGTCGGCGAGTGGTGCAGGTGCACGCGCTATGGAGGAGCTCAAGCAGCTCACTCAGGTGGTTTTAGCGGG CGACACGCCTTGTAGTGAAGTGCTTCCTCATTCCCTTGCCTTCAACTTGTTTCTGCACAACTCTCCATTGATGGCCAATA GCTATTGCGAGGAGGAAATGAAGATGGTCAATGAAACGCGCAAAATTATGGGCCTTCCTGATTTGCGCTTTACCGCAACT TGTGTTCGGGTGCCTGTACTTAGAGCCCATTCGGAGGCTGTGAATATTGAGTTTGACGAGCCTTTTCCAGTGGAAGAAGC TCGCCAATTGCTGAAGGTGGCAGCGGGGCTCGAGTTAATCGAAGATTTTGAGCAGAATCGCTTTCCCATGCCTACCGATG TCACTGATCGCGATCCGGTTGCGGTGGGTCGCATTCGGCAGGACATCAGTGATCCCAATGCTCTCGAGCTTTGGCTATGC GGGGATCAGATCCGTAAAGGTGCCGCTCTAAATGCGATCCAAATTGCAGAATTGTTGTTGTCGTCATCATGA
Upstream 100 bases:
>100_bases ACGTCTTGCCTGATTGAGGCTGTAGGGCTTTATCCCAGCTGGGTTCAATTTTTTATTGAGATCGAACCCATGAACTCAGT CAATAACCTGATCTCACCGC
Downstream 100 bases:
>100_bases GCTCTGCTGCTGAGTCGTCTCCAACTCCTTTTGGCCGTTTGCTGACGGCCATGGTTACACCTTTTGACGCTGATGGATGC GTTGATCTGGCTTTGGCTGG
Product: aspartate semialdehyde dehydrogenase
Products: NA
Alternate protein names: ASA dehydrogenase; ASADH [H]
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MLPISFFPDRPLTVAVLGASGAVGQELLQLLQERSFPIGELRLLASARSAGHVQAWNGSSLVVQEVSEAAFEGVDLVLAS AGGSVSRQWRQVINSAGALMIDNSSAFRMDADVPLVVPEVNPEAVAEHQGVIANPNCTTILLTLVLAPLAARRALRRVVV STYQSASGAGARAMEELKQLTQVVLAGDTPCSEVLPHSLAFNLFLHNSPLMANSYCEEEMKMVNETRKIMGLPDLRFTAT CVRVPVLRAHSEAVNIEFDEPFPVEEARQLLKVAAGLELIEDFEQNRFPMPTDVTDRDPVAVGRIRQDISDPNALELWLC GDQIRKGAALNAIQIAELLLSSS
Sequences:
>Translated_343_residues MLPISFFPDRPLTVAVLGASGAVGQELLQLLQERSFPIGELRLLASARSAGHVQAWNGSSLVVQEVSEAAFEGVDLVLAS AGGSVSRQWRQVINSAGALMIDNSSAFRMDADVPLVVPEVNPEAVAEHQGVIANPNCTTILLTLVLAPLAARRALRRVVV STYQSASGAGARAMEELKQLTQVVLAGDTPCSEVLPHSLAFNLFLHNSPLMANSYCEEEMKMVNETRKIMGLPDLRFTAT CVRVPVLRAHSEAVNIEFDEPFPVEEARQLLKVAAGLELIEDFEQNRFPMPTDVTDRDPVAVGRIRQDISDPNALELWLC GDQIRKGAALNAIQIAELLLSSS >Mature_343_residues MLPISFFPDRPLTVAVLGASGAVGQELLQLLQERSFPIGELRLLASARSAGHVQAWNGSSLVVQEVSEAAFEGVDLVLAS AGGSVSRQWRQVINSAGALMIDNSSAFRMDADVPLVVPEVNPEAVAEHQGVIANPNCTTILLTLVLAPLAARRALRRVVV STYQSASGAGARAMEELKQLTQVVLAGDTPCSEVLPHSLAFNLFLHNSPLMANSYCEEEMKMVNETRKIMGLPDLRFTAT CVRVPVLRAHSEAVNIEFDEPFPVEEARQLLKVAAGLELIEDFEQNRFPMPTDVTDRDPVAVGRIRQDISDPNALELWLC GDQIRKGAALNAIQIAELLLSSS
Specific function: Unknown
COG id: COG0136
COG function: function code E; Aspartate-semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate-semialdehyde dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788658, Length=335, Percent_Identity=35.8208955223881, Blast_Score=182, Evalue=4e-47, Organism=Escherichia coli, GI1789841, Length=355, Percent_Identity=25.9154929577465, Blast_Score=92, Evalue=6e-20, Organism=Saccharomyces cerevisiae, GI6320362, Length=390, Percent_Identity=28.4615384615385, Blast_Score=92, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012080 - InterPro: IPR005986 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 [H]
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC [H]
EC number: =1.2.1.11 [H]
Molecular weight: Translated: 37098; Mature: 37098
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPISFFPDRPLTVAVLGASGAVGQELLQLLQERSFPIGELRLLASARSAGHVQAWNGSS CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEECCCCH LVVQEVSEAAFEGVDLVLASAGGSVSRQWRQVINSAGALMIDNSSAFRMDADVPLVVPEV HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCEEECCCCCEEECCC NPEAVAEHQGVIANPNCTTILLTLVLAPLAARRALRRVVVSTYQSASGAGARAMEELKQL CHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH TQVVLAGDTPCSEVLPHSLAFNLFLHNSPLMANSYCEEEMKMVNETRKIMGLPDLRFTAT HHHHHCCCCCHHHHCCHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH CVRVPVLRAHSEAVNIEFDEPFPVEEARQLLKVAAGLELIEDFEQNRFPMPTDVTDRDPV HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH AVGRIRQDISDPNALELWLCGDQIRKGAALNAIQIAELLLSSS HHHHHHHHCCCCCEEEEEEECHHHHCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MLPISFFPDRPLTVAVLGASGAVGQELLQLLQERSFPIGELRLLASARSAGHVQAWNGSS CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEECCCCH LVVQEVSEAAFEGVDLVLASAGGSVSRQWRQVINSAGALMIDNSSAFRMDADVPLVVPEV HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCEEECCCCCEEECCC NPEAVAEHQGVIANPNCTTILLTLVLAPLAARRALRRVVVSTYQSASGAGARAMEELKQL CHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH TQVVLAGDTPCSEVLPHSLAFNLFLHNSPLMANSYCEEEMKMVNETRKIMGLPDLRFTAT HHHHHCCCCCHHHHCCHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH CVRVPVLRAHSEAVNIEFDEPFPVEEARQLLKVAAGLELIEDFEQNRFPMPTDVTDRDPV HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH AVGRIRQDISDPNALELWLCGDQIRKGAALNAIQIAELLLSSS HHHHHHHHCCCCCEEEEEEECHHHHCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12917486 [H]