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The map label for this gene is ydaM [H]

Identifier: 124026833

GI number: 124026833

Start: 1786081

End: 1787397

Strand: Reverse

Name: ydaM [H]

Synonym: NATL1_21281

Alternate gene names: 124026833

Gene position: 1787397-1786081 (Counterclockwise)

Preceding gene: 124026834

Following gene: 124026827

Centisome position: 95.85

GC content: 35.99

Gene sequence:

>1317_bases
ATGGCTTTAGCCAAAATCAGTGGAGAAAACCGACGCATTAAATCAATATTGTTTTTGATTTGCTGCGCTTTGGCAGGAAT
TTTTCCTCATCTGATGGCGCCTAGCCAGAACTTATTCCCTTCAATTACTTTGGCTGTCTTGCTGGGTGGATATGGATTAA
GAGTTGTTTTACGAGATCGCAGGGACAATTATCAATTGCAAAACGAGTATCTAATTAAGGGAGAAAAATTTGTTGAGACT
CTTCCCAAAGTAGATGTGTTGGTGGCAGCACGTGATGAAGAAAATGTAATAGAGCGATTAGTTTCACGACTTTTATCAAT
TGAATATCCAGAGGAGAAGATTTCTTTATGGATAATTGATGATGGAAGTCAAGATCGAACACCTGATTTATTAAAAAAAT
TAGGTACAAGCTTTTCTAGGATTAATGTTTTAAGTCGCCCTTTGATGAGTGGTGGTGGAAAATCAGGAGCTCTGAATTCT
GTATTGAATAAAACTGATGGAGAGTGGTTATTTATTCTTGATGCTGATGCACAACTACAGAGCAATGTATTACTTAGAGC
AATAGCTCTTGCTTTGCATGGTGGATGGTCTGCGGTGCAGTTAAGAAAATCAGTTGTAAATTGTGAGTTGAATCAAATTG
CTTCATATCAAGCAATGGAGATGGCAATGGATGCCGTTATTCAAAGGGGCAGACTTGCTAGTGGGGGTGTTTCGGAGTTA
AGAGGTAATGGACAATTAATTAATAGAAAAGTTCTTGAATGTTGTGGAGGCTTTAATGAACAAACTATCACTGACGATTT
AGATTTAAGTTTCCGGTTTTTATTAACACGATCGCCAATAGTAATAATGTGGGATCCACCTATTCAAGAGGAAGCAGTGG
AATCATTGTCGGCTTTATTCCGACAAAGAAAAAGATGGGCCGAGGGAGGTTTGCAAAGATTTTTTGATTACTGGCCCTTA
TTGATCTCAAATCGACTTTCAAAATTTAAAAAAATAGATTTATCTTGCTTTTTCTTATTGCAATACGTTTTACCGGTTGT
ATCATTTATAGATTTTATTGTATCAATTATTTTATTTGAAACGCCACTTTATTGGCCACTATCAATAGTTGCATTTGGTA
TTTCTAGTTTAGCTTTTTGGAAAGGATGTTCTCAAAATAGCGAAGGTCCAAGATTACCATCACCTAATTTTATTAATATA
CTTGGAGCAACAATTTACCTTGCACATTGGTTTATAGTTATACCCTTTATAGCAGTTAAGATGTCATTATTTCGTAAGAC
GTTGATTTGGGAAAAAACCGATCATATTGGTGCTTGA

Upstream 100 bases:

>100_bases
CAAGCAAATTCTTTCTCATTATTATCCGAAAACTAAATATGGATTTTTGCCTTAGTGATGAAAGCCTCTTAGAGTCACTT
GTTGATAAAAGGATTACTCC

Downstream 100 bases:

>100_bases
GGAAGTTATTTTATTCATTCAAGATTCACAATTTCTCCATTAAAGAAGTCTGCGAATTGCTTAGCTTTTTGATCAATAGA
ATTTACCTTTAAATTATTTT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MALAKISGENRRIKSILFLICCALAGIFPHLMAPSQNLFPSITLAVLLGGYGLRVVLRDRRDNYQLQNEYLIKGEKFVET
LPKVDVLVAARDEENVIERLVSRLLSIEYPEEKISLWIIDDGSQDRTPDLLKKLGTSFSRINVLSRPLMSGGGKSGALNS
VLNKTDGEWLFILDADAQLQSNVLLRAIALALHGGWSAVQLRKSVVNCELNQIASYQAMEMAMDAVIQRGRLASGGVSEL
RGNGQLINRKVLECCGGFNEQTITDDLDLSFRFLLTRSPIVIMWDPPIQEEAVESLSALFRQRKRWAEGGLQRFFDYWPL
LISNRLSKFKKIDLSCFFLLQYVLPVVSFIDFIVSIILFETPLYWPLSIVAFGISSLAFWKGCSQNSEGPRLPSPNFINI
LGATIYLAHWFIVIPFIAVKMSLFRKTLIWEKTDHIGA

Sequences:

>Translated_438_residues
MALAKISGENRRIKSILFLICCALAGIFPHLMAPSQNLFPSITLAVLLGGYGLRVVLRDRRDNYQLQNEYLIKGEKFVET
LPKVDVLVAARDEENVIERLVSRLLSIEYPEEKISLWIIDDGSQDRTPDLLKKLGTSFSRINVLSRPLMSGGGKSGALNS
VLNKTDGEWLFILDADAQLQSNVLLRAIALALHGGWSAVQLRKSVVNCELNQIASYQAMEMAMDAVIQRGRLASGGVSEL
RGNGQLINRKVLECCGGFNEQTITDDLDLSFRFLLTRSPIVIMWDPPIQEEAVESLSALFRQRKRWAEGGLQRFFDYWPL
LISNRLSKFKKIDLSCFFLLQYVLPVVSFIDFIVSIILFETPLYWPLSIVAFGISSLAFWKGCSQNSEGPRLPSPNFINI
LGATIYLAHWFIVIPFIAVKMSLFRKTLIWEKTDHIGA
>Mature_437_residues
ALAKISGENRRIKSILFLICCALAGIFPHLMAPSQNLFPSITLAVLLGGYGLRVVLRDRRDNYQLQNEYLIKGEKFVETL
PKVDVLVAARDEENVIERLVSRLLSIEYPEEKISLWIIDDGSQDRTPDLLKKLGTSFSRINVLSRPLMSGGGKSGALNSV
LNKTDGEWLFILDADAQLQSNVLLRAIALALHGGWSAVQLRKSVVNCELNQIASYQAMEMAMDAVIQRGRLASGGVSELR
GNGQLINRKVLECCGGFNEQTITDDLDLSFRFLLTRSPIVIMWDPPIQEEAVESLSALFRQRKRWAEGGLQRFFDYWPLL
ISNRLSKFKKIDLSCFFLLQYVLPVVSFIDFIVSIILFETPLYWPLSIVAFGISSLAFWKGCSQNSEGPRLPSPNFINIL
GATIYLAHWFIVIPFIAVKMSLFRKTLIWEKTDHIGA

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787259, Length=267, Percent_Identity=23.9700374531835, Blast_Score=73, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 49290; Mature: 49159

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALAKISGENRRIKSILFLICCALAGIFPHLMAPSQNLFPSITLAVLLGGYGLRVVLRDR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEECC
RDNYQLQNEYLIKGEKFVETLPKVDVLVAARDEENVIERLVSRLLSIEYPEEKISLWIID
CCCCEECCHHEECHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEEE
DGSQDRTPDLLKKLGTSFSRINVLSRPLMSGGGKSGALNSVLNKTDGEWLFILDADAQLQ
CCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEECCCCHHH
SNVLLRAIALALHGGWSAVQLRKSVVNCELNQIASYQAMEMAMDAVIQRGRLASGGVSEL
HHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
RGNGQLINRKVLECCGGFNEQTITDDLDLSFRFLLTRSPIVIMWDPPIQEEAVESLSALF
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHH
RQRKRWAEGGLQRFFDYWPLLISNRLSKFKKIDLSCFFLLQYVLPVVSFIDFIVSIILFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TPLYWPLSIVAFGISSLAFWKGCSQNSEGPRLPSPNFINILGATIYLAHWFIVIPFIAVK
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MSLFRKTLIWEKTDHIGA
HHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ALAKISGENRRIKSILFLICCALAGIFPHLMAPSQNLFPSITLAVLLGGYGLRVVLRDR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEECC
RDNYQLQNEYLIKGEKFVETLPKVDVLVAARDEENVIERLVSRLLSIEYPEEKISLWIID
CCCCEECCHHEECHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEEE
DGSQDRTPDLLKKLGTSFSRINVLSRPLMSGGGKSGALNSVLNKTDGEWLFILDADAQLQ
CCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEECCCCHHH
SNVLLRAIALALHGGWSAVQLRKSVVNCELNQIASYQAMEMAMDAVIQRGRLASGGVSEL
HHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
RGNGQLINRKVLECCGGFNEQTITDDLDLSFRFLLTRSPIVIMWDPPIQEEAVESLSALF
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHH
RQRKRWAEGGLQRFFDYWPLLISNRLSKFKKIDLSCFFLLQYVLPVVSFIDFIVSIILFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TPLYWPLSIVAFGISSLAFWKGCSQNSEGPRLPSPNFINILGATIYLAHWFIVIPFIAVK
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MSLFRKTLIWEKTDHIGA
HHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]