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The map label for this gene is lytB [H]

Identifier: 124026834

GI number: 124026834

Start: 1787443

End: 1788996

Strand: Reverse

Name: lytB [H]

Synonym: NATL1_21291

Alternate gene names: 124026834

Gene position: 1788996-1787443 (Counterclockwise)

Preceding gene: 124026842

Following gene: 124026833

Centisome position: 95.94

GC content: 37.71

Gene sequence:

>1554_bases
TTGATTAAAAGTTATTTAAAGGCTCAAAAGAGTTTTTTTGTTTTTGGTTTACTTCTCTTGATTGGTTTGCCTTATTCAAA
TCAAGTAAGTATTGCGACTCCTCGCAAAGTTAAGTTTTTTGGAACTCATCAGTCGCCTCCTGAGACGCCTTTAATTAGTT
CAGAAAAAAATGTTCTGCTTGTTGGGATCAAGCCATATTTAGGAAAGGAAATCATCAATGATCAAAAATCTCCATCTTTG
AGGCTTGTAAGTATTGGTAGAAACTTGATTCTGAAAGATGCTAATGGAGTCACAAGAAAGGCTAAAGAAATTAATATTGG
TTGGCGAGCACAACAATTATTAAATCCAAAAGTATTTGTTCGAAACAAAATTGGTCCTTTTGCAAGTTTCGAGTCTGCTG
AAAGATTGGCAAATGATTTAAAAGATAAAGGTATTGAATCAACTATTGCGCATCCTTTGGATTGGGAGGTTTGGGTATCA
GGCGACATCGAGATTCCTCCAGCCATAAAGTCGACTTATCAAAAAATAAAAGTTTCAAAGCTTGTTTTTCCTTATCTTTA
TGGAAATGATGGAAAGATTGCCCTCAAAGGTCCTATCTCTTTGCAAGCTCCTGATGGGTTGCGCTGGGAGAAGGGGATAT
ACTTAGGTCCATTTTCGATCCAGCCAGATGCATATGGAAGTTGGACTTTGGTTGAGCATGTTCCGATTGAGAGATATTTA
AACGGAGTCGTTCCTTATGAAATCGGCGCCAGTTCACCTGAAGCCGCACTAGCAGCGCAGGCGGTACTAGCCAGAACATG
GGCTATGGCCAATACCCATAGATTCAAAGTTGATGGATACAATCTTTGTAGTGATACTCAATGTCAGGTTTATAAGGATC
CATCTAAAGCCAATTTGAAAATTAAAACAGCTATAAAAAAAACAACTGGCAAAATTCTCACTTGGAATAAAAAGCCAATA
AACACTGTTTATCACGCAACTAATGGTGGAGTAATGGCCTCGGTCGATGAAGCATGGTCAATTAATCAAGTTCCCTATTT
GCAAATGCGCTTGGATGGTCCAAAACACTGGGCTAGTGCGGTTGATTTACCTCTATCAAATGAGAAATATTTGAAATCTT
TTTTATTTTCCAAGTCTGAGGCTTTTGGGTCTGATCATCCACTTTTTAGATGGGAACGAACGATAGAGTCTTCTCAGATA
TCTAAACAGCTCAAAAAAGCTCAAAAAGTTGGCAGTTCTTTTTATCCATATAAAATTGAGGTTTTAAGGAGAGGAAGTAG
TGGGAGAGTCACGTCGTTAAAAATTGAAGGGAAGTCTGGTTCTAAAATTTTGCTTAAACTTGATGACATTCGACGTGTTC
TTAGAGAATTACCAAGCACATTATTCGTTGTTAAAGAAATTAAAGAAGGTAAATGGCTGTTTTCTGGTGGAGGTTTTGGC
CATGGAGCAGGAATGTCTCAGTCTGGGGCTATAGAGTTAGCAAAAAAAGGATGGACTACCAAGCAAATTCTTTCTCATTA
TTATCCGAAAACTAAATATGGATTTTTGCCTTAG

Upstream 100 bases:

>100_bases
TTTGGCATTGATAAAGCATAGTTAGTCTATAAGAATACGTCCTTGAGCTCACTTAAGCCAACCCGAAATTATTAAATTCT
CATGGAAGAAGATTTTTGTT

Downstream 100 bases:

>100_bases
TGATGAAAGCCTCTTAGAGTCACTTGTTGATAAAAGGATTACTCCATGGCTTTAGCCAAAATCAGTGGAGAAAACCGACG
CATTAAATCAATATTGTTTT

Product: putative amidase enhancer

Products: NA

Alternate protein names: Cell wall-associated polypeptide CWBP76; CWBP76; Modifier protein of major autolysin [H]

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MIKSYLKAQKSFFVFGLLLLIGLPYSNQVSIATPRKVKFFGTHQSPPETPLISSEKNVLLVGIKPYLGKEIINDQKSPSL
RLVSIGRNLILKDANGVTRKAKEINIGWRAQQLLNPKVFVRNKIGPFASFESAERLANDLKDKGIESTIAHPLDWEVWVS
GDIEIPPAIKSTYQKIKVSKLVFPYLYGNDGKIALKGPISLQAPDGLRWEKGIYLGPFSIQPDAYGSWTLVEHVPIERYL
NGVVPYEIGASSPEAALAAQAVLARTWAMANTHRFKVDGYNLCSDTQCQVYKDPSKANLKIKTAIKKTTGKILTWNKKPI
NTVYHATNGGVMASVDEAWSINQVPYLQMRLDGPKHWASAVDLPLSNEKYLKSFLFSKSEAFGSDHPLFRWERTIESSQI
SKQLKKAQKVGSSFYPYKIEVLRRGSSGRVTSLKIEGKSGSKILLKLDDIRRVLRELPSTLFVVKEIKEGKWLFSGGGFG
HGAGMSQSGAIELAKKGWTTKQILSHYYPKTKYGFLP

Sequences:

>Translated_517_residues
MIKSYLKAQKSFFVFGLLLLIGLPYSNQVSIATPRKVKFFGTHQSPPETPLISSEKNVLLVGIKPYLGKEIINDQKSPSL
RLVSIGRNLILKDANGVTRKAKEINIGWRAQQLLNPKVFVRNKIGPFASFESAERLANDLKDKGIESTIAHPLDWEVWVS
GDIEIPPAIKSTYQKIKVSKLVFPYLYGNDGKIALKGPISLQAPDGLRWEKGIYLGPFSIQPDAYGSWTLVEHVPIERYL
NGVVPYEIGASSPEAALAAQAVLARTWAMANTHRFKVDGYNLCSDTQCQVYKDPSKANLKIKTAIKKTTGKILTWNKKPI
NTVYHATNGGVMASVDEAWSINQVPYLQMRLDGPKHWASAVDLPLSNEKYLKSFLFSKSEAFGSDHPLFRWERTIESSQI
SKQLKKAQKVGSSFYPYKIEVLRRGSSGRVTSLKIEGKSGSKILLKLDDIRRVLRELPSTLFVVKEIKEGKWLFSGGGFG
HGAGMSQSGAIELAKKGWTTKQILSHYYPKTKYGFLP
>Mature_517_residues
MIKSYLKAQKSFFVFGLLLLIGLPYSNQVSIATPRKVKFFGTHQSPPETPLISSEKNVLLVGIKPYLGKEIINDQKSPSL
RLVSIGRNLILKDANGVTRKAKEINIGWRAQQLLNPKVFVRNKIGPFASFESAERLANDLKDKGIESTIAHPLDWEVWVS
GDIEIPPAIKSTYQKIKVSKLVFPYLYGNDGKIALKGPISLQAPDGLRWEKGIYLGPFSIQPDAYGSWTLVEHVPIERYL
NGVVPYEIGASSPEAALAAQAVLARTWAMANTHRFKVDGYNLCSDTQCQVYKDPSKANLKIKTAIKKTTGKILTWNKKPI
NTVYHATNGGVMASVDEAWSINQVPYLQMRLDGPKHWASAVDLPLSNEKYLKSFLFSKSEAFGSDHPLFRWERTIESSQI
SKQLKKAQKVGSSFYPYKIEVLRRGSSGRVTSLKIEGKSGSKILLKLDDIRRVLRELPSTLFVVKEIKEGKWLFSGGGFG
HGAGMSQSGAIELAKKGWTTKQILSHYYPKTKYGFLP

Specific function: Possibly involved in cell wall metabolism during spore formation. Enhances the amidase activity approximately threefold [H]

COG id: COG2385

COG function: function code D; Sporulation protein and related proteins

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein. Secreted, cell wall. Note=Cell wall localization shown in PubMed:11987133 [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007253
- InterPro:   IPR013486
- InterPro:   IPR013693 [H]

Pfam domain/function: PF04122 CW_binding_2; PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 57660; Mature: 57660

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKSYLKAQKSFFVFGLLLLIGLPYSNQVSIATPRKVKFFGTHQSPPETPLISSEKNVLL
CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCEEE
VGIKPYLGKEIINDQKSPSLRLVSIGRNLILKDANGVTRKAKEINIGWRAQQLLNPKVFV
EECCHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCCCCHHHEECCCCHHHHHCCCEEEE
RNKIGPFASFESAERLANDLKDKGIESTIAHPLDWEVWVSGDIEIPPAIKSTYQKIKVSK
ECCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
LVFPYLYGNDGKIALKGPISLQAPDGLRWEKGIYLGPFSIQPDAYGSWTLVEHVPIERYL
EEEEEEECCCCEEEEECCEEEECCCCCCCCCCEEECCCEECCCCCCCEEEEECCCHHHHH
NGVVPYEIGASSPEAALAAQAVLARTWAMANTHRFKVDGYNLCSDTQCQVYKDPSKANLK
CCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEECCCCCCEE
IKTAIKKTTGKILTWNKKPINTVYHATNGGVMASVDEAWSINQVPYLQMRLDGPKHWASA
EEEEEHHCCCCEEEECCCCCCEEEEECCCCEEEECCCCCCCCCCCEEEEEECCCHHHHHH
VDLPLSNEKYLKSFLFSKSEAFGSDHPLFRWERTIESSQISKQLKKAQKVGSSFYPYKIE
CCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
VLRRGSSGRVTSLKIEGKSGSKILLKLDDIRRVLRELPSTLFVVKEIKEGKWLFSGGGFG
EEECCCCCCEEEEEEECCCCCEEEEEEHHHHHHHHHCCHHEEHHHHHCCCCEEEECCCCC
HGAGMSQSGAIELAKKGWTTKQILSHYYPKTKYGFLP
CCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MIKSYLKAQKSFFVFGLLLLIGLPYSNQVSIATPRKVKFFGTHQSPPETPLISSEKNVLL
CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCEEE
VGIKPYLGKEIINDQKSPSLRLVSIGRNLILKDANGVTRKAKEINIGWRAQQLLNPKVFV
EECCHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCCCCHHHEECCCCHHHHHCCCEEEE
RNKIGPFASFESAERLANDLKDKGIESTIAHPLDWEVWVSGDIEIPPAIKSTYQKIKVSK
ECCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
LVFPYLYGNDGKIALKGPISLQAPDGLRWEKGIYLGPFSIQPDAYGSWTLVEHVPIERYL
EEEEEEECCCCEEEEECCEEEECCCCCCCCCCEEECCCEECCCCCCCEEEEECCCHHHHH
NGVVPYEIGASSPEAALAAQAVLARTWAMANTHRFKVDGYNLCSDTQCQVYKDPSKANLK
CCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEECCCCCCEE
IKTAIKKTTGKILTWNKKPINTVYHATNGGVMASVDEAWSINQVPYLQMRLDGPKHWASA
EEEEEHHCCCCEEEECCCCCCEEEEECCCCEEEECCCCCCCCCCCEEEEEECCCHHHHHH
VDLPLSNEKYLKSFLFSKSEAFGSDHPLFRWERTIESSQISKQLKKAQKVGSSFYPYKIE
CCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
VLRRGSSGRVTSLKIEGKSGSKILLKLDDIRRVLRELPSTLFVVKEIKEGKWLFSGGGFG
EEECCCCCCEEEEEEECCCCCEEEEEEHHHHHHHHHCCHHEEHHHHHCCCCEEEECCCCC
HGAGMSQSGAIELAKKGWTTKQILSHYYPKTKYGFLP
CCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1357079; 1356138; 9384377 [H]