| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is yuiD [H]
Identifier: 124026220
GI number: 124026220
Start: 1228426
End: 1228941
Strand: Reverse
Name: yuiD [H]
Synonym: NATL1_15141
Alternate gene names: 124026220
Gene position: 1228941-1228426 (Counterclockwise)
Preceding gene: 124026221
Following gene: 124026219
Centisome position: 65.9
GC content: 38.18
Gene sequence:
>516_bases ATGAATCTTAATCCAGCTTTCGAATTTCAATTCATTTATATTCTTGATAATGCTGTATTGGCTTGGGGGCTAGCAGCATG TGGTCTTGCTCAATTTTCTAAATTATTATTCGAATTGATTTTTAAGCAACGGTGGAGACCGTCAGTACTTATTGAAACAG GAGGTATGCCTTCCAGTCACTCGGCTTTGGTAACAGGAACCGCTGCAGGAATTGGACTTCAGCTTGGTTTTAATGATCCA GTATTTGCTTTGGCTTCAACAATTGCTTTTATTGTGATGTACGACGCTTCGGGCATAAGGAGGTCGGCAGGCTTAACAGC AGCAAGAGTCAATCAAATTTTAAAAGATAATTCCAACGAATTATCTTCAGAAACTACTTTGAAAGAATCATTAGGGCACA CAAAAATTGAGGTATTGATAGGAAGTATTCTTGGACCAATTGTGGCTTTACCAGGTATTTTCTTCATTGGATCCCCTCTG CATATTTTGCAAATGATTGGATTAGTTTCTTTGTGA
Upstream 100 bases:
>100_bases CAGATCTTTTAGTAGCTAAAGCAAAAAGTGCTCTTGATCCTTGGCCAGAAAAATCAAAACCTCTTCTTGCATTGGCTGAT TACATTACAAGTAGAGATAG
Downstream 100 bases:
>100_bases AAGAGGTAAAAGCAAAAGAAGATCGTGTTGTTTTAACTAAGGATCAAGAAAAATCTCTTCAAATTTTCTGTGAATGGCTA GAGGCCCCGTATTCCTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MNLNPAFEFQFIYILDNAVLAWGLAACGLAQFSKLLFELIFKQRWRPSVLIETGGMPSSHSALVTGTAAGIGLQLGFNDP VFALASTIAFIVMYDASGIRRSAGLTAARVNQILKDNSNELSSETTLKESLGHTKIEVLIGSILGPIVALPGIFFIGSPL HILQMIGLVSL
Sequences:
>Translated_171_residues MNLNPAFEFQFIYILDNAVLAWGLAACGLAQFSKLLFELIFKQRWRPSVLIETGGMPSSHSALVTGTAAGIGLQLGFNDP VFALASTIAFIVMYDASGIRRSAGLTAARVNQILKDNSNELSSETTLKESLGHTKIEVLIGSILGPIVALPGIFFIGSPL HILQMIGLVSL >Mature_171_residues MNLNPAFEFQFIYILDNAVLAWGLAACGLAQFSKLLFELIFKQRWRPSVLIETGGMPSSHSALVTGTAAGIGLQLGFNDP VFALASTIAFIVMYDASGIRRSAGLTAARVNQILKDNSNELSSETTLKESLGHTKIEVLIGSILGPIVALPGIFFIGSPL HILQMIGLVSL
Specific function: Unknown
COG id: COG1963
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003832 [H]
Pfam domain/function: PF02681 DUF212 [H]
EC number: NA
Molecular weight: Translated: 18290; Mature: 18290
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLNPAFEFQFIYILDNAVLAWGLAACGLAQFSKLLFELIFKQRWRPSVLIETGGMPSSH CCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC SALVTGTAAGIGLQLGFNDPVFALASTIAFIVMYDASGIRRSAGLTAARVNQILKDNSNE CEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHCCCCH LSSETTLKESLGHTKIEVLIGSILGPIVALPGIFFIGSPLHILQMIGLVSL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure MNLNPAFEFQFIYILDNAVLAWGLAACGLAQFSKLLFELIFKQRWRPSVLIETGGMPSSH CCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC SALVTGTAAGIGLQLGFNDPVFALASTIAFIVMYDASGIRRSAGLTAARVNQILKDNSNE CEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHCCCCH LSSETTLKESLGHTKIEVLIGSILGPIVALPGIFFIGSPLHILQMIGLVSL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]