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The map label for this gene is 124026219

Identifier: 124026219

GI number: 124026219

Start: 1226969

End: 1228315

Strand: Reverse

Name: 124026219

Synonym: NATL1_15131

Alternate gene names: NA

Gene position: 1228315-1226969 (Counterclockwise)

Preceding gene: 124026220

Following gene: 124026216

Centisome position: 65.87

GC content: 36.82

Gene sequence:

>1347_bases
ATGAAAGGCTTTGCAGGTAGCGGAAAAACATATTTATCGATGAAATTATTAAAAAAGGTCGATGAGCTTGGTTTGTGTTG
GACAGTAGTTGCACCAACTCATAAAGCGGTAGGTGTACTAAGGGAGGGTTTGAAAAATGAATCTATTCAACCCACATGGT
TCCCCTCTACTATTCACCGTTTGCTTCGACTTAAGTTAAAGAGACAGGCGGATATAGAAATATGTGAAAAAACAGATCAA
ACAGAGAGCTCTTTGGAGAATTTAGGACTTGTTTTAATTGATGAAGCATCAATGATTGATTCCAAATTATTGGAGATAAC
TCTTGAATGCGCAAGATGCAATTCGACTCGTTTGGTTTTTGTTGGCGATCCTGCTCAACTACCACCAGTGGGAGAAAGTA
CTAGCTCAGTTTTTTTAATGAAAAGAGCTGTAAATACTGAACTTAGGGAAGTTGTTCGTCATCAAGGGCCTGTTCTGAAA
TTGGCAAAAATAATTAGAGACGGGCAAATCCCTTGTATGCAACCACCAATAGTACAGGTTGTTAATTCTAAGAAAGGTAA
TGTTGGAATATTAGATAGAACAAGTTGGCTTGAAAGAGCTAAATCAGCATTGAGATTATCTTCCTTAGAGGATGATCACG
ATAGAGCAAGAATTTTGTGTTACACGAACCGTATTGTTGATAATTTAGTTCCTCATGCAAGAAGAGCTATACATGGTGAG
ATGGCAGATCAATATCAGGTTTTACCTGGGGAGGTTTTAATAAGCCGTAAAGCTGTAATGGTAAATGCGTCATTAAATGA
GGATGAGCTTGGAGAAGAACCAGATATTTTGATTAGTTCCAATAGAGAGATGGTGGTAGAAGATGTTATTCCAAATAGTT
TTGACTTGGCCTCTTTAGGAATCCATCAAGATTTTGAAAACCCTTTACCAGTTATTGAAACTCAGATAGCTAAAGTTAAC
TGCGATCAAAAAGAATTTTCTTTGAGGTTAATGCCTCAAATAGGTTCTAAAGCTCGTAAAGATTTGGATCTTTCTTTGAA
TGAATTGAGCAATTTGGCAAGAGAGAGAGGAAAAAAAAATAGTGGTTCCATTTGGAAACTTTTCTTTTTTATCCGAGATT
CATTCGCCTCTTTAGGTCCTGCTTCCGTACTTACAATTCACAGGAGTCAAGGAAGTACTTTTGGAGAAGTGTTTATAACT
TCTGATGCCTTTTGGCCTAAAGATCTTGAATTTAGAAGAAGGCTTGTATATGTTGCTGTAAGCAGAGCGAGTAAAGGAGT
ATGGATCGTTGGTGATAATAAAAGCAAGATGAATCAAGCTCTTTTAGAGAAATTATTAATGGATTGA

Upstream 100 bases:

>100_bases
AGCAAAAGAAGATCGTGTTGTTTTAACTAAGGATCAAGAAAAATCTCTTCAAATTTTCTGTGAATGGCTAGAGGCCCCGT
ATTCCTTTAAACCCTTTGTA

Downstream 100 bases:

>100_bases
GTTGTAAAATGTTATTTATAAAAATAGATTTGCTTTAGACTTTATTCATAACACTTCTTTTCCAATTTTCTAGAATAAGA
GGCGAACTTGCCCAATGCAG

Product: exodeoxyribonuclease V

Products: NA

Alternate protein names: DNA Helicase; Bacteriophage-Type DNA Helicase; Helicase; Deoxyribonuclease; DNA Helicase Related Phage

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MKGFAGSGKTYLSMKLLKKVDELGLCWTVVAPTHKAVGVLREGLKNESIQPTWFPSTIHRLLRLKLKRQADIEICEKTDQ
TESSLENLGLVLIDEASMIDSKLLEITLECARCNSTRLVFVGDPAQLPPVGESTSSVFLMKRAVNTELREVVRHQGPVLK
LAKIIRDGQIPCMQPPIVQVVNSKKGNVGILDRTSWLERAKSALRLSSLEDDHDRARILCYTNRIVDNLVPHARRAIHGE
MADQYQVLPGEVLISRKAVMVNASLNEDELGEEPDILISSNREMVVEDVIPNSFDLASLGIHQDFENPLPVIETQIAKVN
CDQKEFSLRLMPQIGSKARKDLDLSLNELSNLARERGKKNSGSIWKLFFFIRDSFASLGPASVLTIHRSQGSTFGEVFIT
SDAFWPKDLEFRRRLVYVAVSRASKGVWIVGDNKSKMNQALLEKLLMD

Sequences:

>Translated_448_residues
MKGFAGSGKTYLSMKLLKKVDELGLCWTVVAPTHKAVGVLREGLKNESIQPTWFPSTIHRLLRLKLKRQADIEICEKTDQ
TESSLENLGLVLIDEASMIDSKLLEITLECARCNSTRLVFVGDPAQLPPVGESTSSVFLMKRAVNTELREVVRHQGPVLK
LAKIIRDGQIPCMQPPIVQVVNSKKGNVGILDRTSWLERAKSALRLSSLEDDHDRARILCYTNRIVDNLVPHARRAIHGE
MADQYQVLPGEVLISRKAVMVNASLNEDELGEEPDILISSNREMVVEDVIPNSFDLASLGIHQDFENPLPVIETQIAKVN
CDQKEFSLRLMPQIGSKARKDLDLSLNELSNLARERGKKNSGSIWKLFFFIRDSFASLGPASVLTIHRSQGSTFGEVFIT
SDAFWPKDLEFRRRLVYVAVSRASKGVWIVGDNKSKMNQALLEKLLMD
>Mature_448_residues
MKGFAGSGKTYLSMKLLKKVDELGLCWTVVAPTHKAVGVLREGLKNESIQPTWFPSTIHRLLRLKLKRQADIEICEKTDQ
TESSLENLGLVLIDEASMIDSKLLEITLECARCNSTRLVFVGDPAQLPPVGESTSSVFLMKRAVNTELREVVRHQGPVLK
LAKIIRDGQIPCMQPPIVQVVNSKKGNVGILDRTSWLERAKSALRLSSLEDDHDRARILCYTNRIVDNLVPHARRAIHGE
MADQYQVLPGEVLISRKAVMVNASLNEDELGEEPDILISSNREMVVEDVIPNSFDLASLGIHQDFENPLPVIETQIAKVN
CDQKEFSLRLMPQIGSKARKDLDLSLNELSNLARERGKKNSGSIWKLFFFIRDSFASLGPASVLTIHRSQGSTFGEVFIT
SDAFWPKDLEFRRRLVYVAVSRASKGVWIVGDNKSKMNQALLEKLLMD

Specific function: Unknown

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.11.5

Molecular weight: Translated: 50182; Mature: 50182

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGFAGSGKTYLSMKLLKKVDELGLCWTVVAPTHKAVGVLREGLKNESIQPTWFPSTIHR
CCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHH
LLRLKLKRQADIEICEKTDQTESSLENLGLVLIDEASMIDSKLLEITLECARCNSTRLVF
HHHHHHHHCCCHHHHHCCCCHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEE
VGDPAQLPPVGESTSSVFLMKRAVNTELREVVRHQGPVLKLAKIIRDGQIPCMQPPIVQV
ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHH
VNSKKGNVGILDRTSWLERAKSALRLSSLEDDHDRARILCYTNRIVDNLVPHARRAIHGE
HCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHH
MADQYQVLPGEVLISRKAVMVNASLNEDELGEEPDILISSNREMVVEDVIPNSFDLASLG
HHHHHCCCCCHHEEECCEEEEECCCCHHHCCCCCCEEEECCCCEEEECCCCCCCCHHHCC
IHQDFENPLPVIETQIAKVNCDQKEFSLRLMPQIGSKARKDLDLSLNELSNLARERGKKN
CCCCCCCCCCHHHHHHHHCCCCHHHHHEEECHHHCHHHHHCCCCCHHHHHHHHHHHCCCC
SGSIWKLFFFIRDSFASLGPASVLTIHRSQGSTFGEVFITSDAFWPKDLEFRRRLVYVAV
CCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHEEEE
SRASKGVWIVGDNKSKMNQALLEKLLMD
ECCCCCEEEEECCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKGFAGSGKTYLSMKLLKKVDELGLCWTVVAPTHKAVGVLREGLKNESIQPTWFPSTIHR
CCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHH
LLRLKLKRQADIEICEKTDQTESSLENLGLVLIDEASMIDSKLLEITLECARCNSTRLVF
HHHHHHHHCCCHHHHHCCCCHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEE
VGDPAQLPPVGESTSSVFLMKRAVNTELREVVRHQGPVLKLAKIIRDGQIPCMQPPIVQV
ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHH
VNSKKGNVGILDRTSWLERAKSALRLSSLEDDHDRARILCYTNRIVDNLVPHARRAIHGE
HCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHH
MADQYQVLPGEVLISRKAVMVNASLNEDELGEEPDILISSNREMVVEDVIPNSFDLASLG
HHHHHCCCCCHHEEECCEEEEECCCCHHHCCCCCCEEEECCCCEEEECCCCCCCCHHHCC
IHQDFENPLPVIETQIAKVNCDQKEFSLRLMPQIGSKARKDLDLSLNELSNLARERGKKN
CCCCCCCCCCHHHHHHHHCCCCHHHHHEEECHHHCHHHHHCCCCCHHHHHHHHHHHCCCC
SGSIWKLFFFIRDSFASLGPASVLTIHRSQGSTFGEVFITSDAFWPKDLEFRRRLVYVAV
CCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHEEEE
SRASKGVWIVGDNKSKMNQALLEKLLMD
ECCCCCEEEEECCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA