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The map label for this gene is sepF

Identifier: 124025160

GI number: 124025160

Start: 408985

End: 409560

Strand: Direct

Name: sepF

Synonym: NATL1_04471

Alternate gene names: 124025160

Gene position: 408985-409560 (Clockwise)

Preceding gene: 124025159

Following gene: 124025161

Centisome position: 21.93

GC content: 43.4

Gene sequence:

>576_bases
GTGTCGCTTATTTCCCGTCTTCGTGCTGTCGTCGCTGGCGATGACTTTTTAGATAGTGATTTTGATGAGCTCGAGTACGA
TTCAAGTGATGACTTTGAGAATTTCAATAGAGGTAACAAAGAGGGAAGTACAGAAATGGCAACCATCTCTCAGGCCAATC
CTTTTGATGGAAGGAGTGGTTTCCCTCCCTCAAACGTTATTGGTATGCCTGGTATCTCAACAAATGATTCTGAAGTTAGT
TTGATGGAACCTCGGAGCTTTGATGAAATGCCAAGAGTGATACAAGCCTTGAGGGAGCGTAAAACAGTTATCTTAAATCT
CACAATGATGGAGCCTGATCAGGCTCAAAGAGCAGTTGATTTTGTCGCAGGCGGAACGTTTGCTATTGATGGACATCAAG
AAAGAGTCGGAGAAAGCATTTTTCTTTTTGCACCTTCTTGCGTAACAGTAACTAATTCATTTCAAGAGGAAGCCTCCCCT
TCAAATATGAGTAATAAAGGGAATGATTTGATTTCTAAGGAAACCTCTCCTGCGCCAGAGCCTGCTTGGGGGGAGACAGT
CGCTACTGCTCTTTGA

Upstream 100 bases:

>100_bases
GAACGTTATTTAAGTATATGGTTCATCCTTCATGTTGTTGAAGATGTATCGATTGTTGGCTTATCCAACTTTTAACAAAT
CATCCCGAGAGGATTAACTG

Downstream 100 bases:

>100_bases
ATGATTAATTAGATTGGAAATTTCTCTTGGGATAATTGGCCTTGGCAGTATGGCTAAGGCTATTGTTTTACCTCTTTTGG
AGAGAGGTGAATACAATCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MSLISRLRAVVAGDDFLDSDFDELEYDSSDDFENFNRGNKEGSTEMATISQANPFDGRSGFPPSNVIGMPGISTNDSEVS
LMEPRSFDEMPRVIQALRERKTVILNLTMMEPDQAQRAVDFVAGGTFAIDGHQERVGESIFLFAPSCVTVTNSFQEEASP
SNMSNKGNDLISKETSPAPEPAWGETVATAL

Sequences:

>Translated_191_residues
MSLISRLRAVVAGDDFLDSDFDELEYDSSDDFENFNRGNKEGSTEMATISQANPFDGRSGFPPSNVIGMPGISTNDSEVS
LMEPRSFDEMPRVIQALRERKTVILNLTMMEPDQAQRAVDFVAGGTFAIDGHQERVGESIFLFAPSCVTVTNSFQEEASP
SNMSNKGNDLISKETSPAPEPAWGETVATAL
>Mature_190_residues
SLISRLRAVVAGDDFLDSDFDELEYDSSDDFENFNRGNKEGSTEMATISQANPFDGRSGFPPSNVIGMPGISTNDSEVSL
MEPRSFDEMPRVIQALRERKTVILNLTMMEPDQAQRAVDFVAGGTFAIDGHQERVGESIFLFAPSCVTVTNSFQEEASPS
NMSNKGNDLISKETSPAPEPAWGETVATAL

Specific function: Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of ftsZ protofilaments. Its function overlaps with ftsA

COG id: COG1799

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm. Note=Localizes to the division site, in a ftsZ-dependent manner (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sepF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SEPF_PROM1 (A2C0K1)

Other databases:

- EMBL:   CP000553
- RefSeq:   YP_001014276.1
- STRING:   A2C0K1
- GeneID:   4779455
- GenomeReviews:   CP000553_GR
- KEGG:   pme:NATL1_04471
- eggNOG:   COG1799
- HOGENOM:   HBG732469
- OMA:   FLFAPSC
- ProtClustDB:   CLSK919198
- BioCyc:   PMAR167555:NATL1_04471-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01197
- InterPro:   IPR023052
- InterPro:   IPR007561

Pfam domain/function: PF04472 DUF552

EC number: NA

Molecular weight: Translated: 20810; Mature: 20679

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLISRLRAVVAGDDFLDSDFDELEYDSSDDFENFNRGNKEGSTEMATISQANPFDGRSG
CHHHHHHHHHHCCCCHHCCCHHHHCCCCCCCHHHHCCCCCCCCCCEEEECCCCCCCCCCC
FPPSNVIGMPGISTNDSEVSLMEPRSFDEMPRVIQALRERKTVILNLTMMEPDQAQRAVD
CCCCCEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCEEEEEEEEECCHHHHHHHH
FVAGGTFAIDGHQERVGESIFLFAPSCVTVTNSFQEEASPSNMSNKGNDLISKETSPAPE
HHCCCEEEECCCHHHHCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PAWGETVATAL
CCCCCHHHHCC
>Mature Secondary Structure 
SLISRLRAVVAGDDFLDSDFDELEYDSSDDFENFNRGNKEGSTEMATISQANPFDGRSG
HHHHHHHHHHCCCCHHCCCHHHHCCCCCCCHHHHCCCCCCCCCCEEEECCCCCCCCCCC
FPPSNVIGMPGISTNDSEVSLMEPRSFDEMPRVIQALRERKTVILNLTMMEPDQAQRAVD
CCCCCEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCEEEEEEEEECCHHHHHHHH
FVAGGTFAIDGHQERVGESIFLFAPSCVTVTNSFQEEASPSNMSNKGNDLISKETSPAPE
HHCCCEEEECCCHHHHCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PAWGETVATAL
CCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA