| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is ycf34
Identifier: 124024925
GI number: 124024925
Start: 197789
End: 198040
Strand: Reverse
Name: ycf34
Synonym: NATL1_02121
Alternate gene names: NA
Gene position: 198040-197789 (Counterclockwise)
Preceding gene: 124024928
Following gene: 124024924
Centisome position: 10.62
GC content: 38.1
Gene sequence:
>252_bases ATGTGCATATGTGTTGATTGTGCTTGGGTAGATAGTTGTAAGACCTACTACACAGTTGAAGAAAATCATGGAGTCAGGCA TCTCTCTGAAAATCCAGATTTTCAGGGAAATAATCCAAAAATTCACATCAATATTTTTGATATGCCTGAGAGGGAAATAG GAATAGAGTGGGATGTAAGGGGATGCGATAGTTTTAAACTTGATCAAGGTAAATGGAGCAGGCTGCGTCCTGGAGAAGAA ATTCCAAAATAA
Upstream 100 bases:
>100_bases GATATAGGCCAATCTTTTGGATTTAAATCTCCAAAAAGATCATTTGATAGTAATGTGTGTTGAATTATCAAATTGACACC TAAACTTTCCTTGAATAGTT
Downstream 100 bases:
>100_bases TAGTTATAATCAATAAATTGCAAAATTTCTACACATCAAAATCAAAATATTTATTAGCTTTACATAGCACATCAGAGTCT TTTGGAATTGCAGTAAAGGA
Product: putative Ycf34
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MCICVDCAWVDSCKTYYTVEENHGVRHLSENPDFQGNNPKIHINIFDMPEREIGIEWDVRGCDSFKLDQGKWSRLRPGEE IPK
Sequences:
>Translated_83_residues MCICVDCAWVDSCKTYYTVEENHGVRHLSENPDFQGNNPKIHINIFDMPEREIGIEWDVRGCDSFKLDQGKWSRLRPGEE IPK >Mature_83_residues MCICVDCAWVDSCKTYYTVEENHGVRHLSENPDFQGNNPKIHINIFDMPEREIGIEWDVRGCDSFKLDQGKWSRLRPGEE IPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9698; Mature: 9698
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 6.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCICVDCAWVDSCKTYYTVEENHGVRHLSENPDFQGNNPKIHINIFDMPEREIGIEWDVR CEEEEEECCCCCCEEEEEECCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCCCEEEECC GCDSFKLDQGKWSRLRPGEEIPK CCCCEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MCICVDCAWVDSCKTYYTVEENHGVRHLSENPDFQGNNPKIHINIFDMPEREIGIEWDVR CEEEEEECCCCCCEEEEEECCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCCCEEEECC GCDSFKLDQGKWSRLRPGEEIPK CCCCEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA