| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124024924
Identifier: 124024924
GI number: 124024924
Start: 197109
End: 197828
Strand: Reverse
Name: 124024924
Synonym: NATL1_02111
Alternate gene names: NA
Gene position: 197828-197109 (Counterclockwise)
Preceding gene: 124024925
Following gene: 124024918
Centisome position: 10.61
GC content: 29.58
Gene sequence:
>720_bases ATGGAGCAGGCTGCGTCCTGGAGAAGAAATTCCAAAATAATAGTTATAATCAATAAATTGCAAAATTTCTACACATCAAA ATCAAAATATTTATTAGCTTTACATAGCACATCAGAGTCTTTTGGAATTGCAGTAAAGGATATAGAGGAAAAAGAAACAA TAATAAAAAGCGAAGTATTCAATATTGGTCGCGCATTATCCAATAAATTATTTAGTTGTATAGAAACAATTCTCCCTAGA AAATTTTGGAAGCAAATAATTCGAATTTCAGTAGCGAAAGGTCCCGGAAGTTATACCAGTACAAGATTAACAATCTCAAT GGCTAGAACAATTGCCCAGCAGATTAATTGTTCACTCGATTCGATAAGTTCCTTTCATATAATGGCTCCAAGACTTTATA AATATCTTGATCAAAATCAAAATTTCAATCCATTTTGGATAAAAGATATTTTACCACGCAGGGGCATTGTAGCTGGTAAA TATAAACTAATTAAAATTCACCAAGAGTCAGATTTTTATGAATTTAGTGAAATAATTTCTCCACAATTAATAAGCAATGA TAAAGAAATAAATCCATCAATTAAGGCTTCAAATAATATAGAAAAAGATATTATTTCGTTGATAAATTTTTCTGAATATT GTCAGAAATCAAACTTTCATTCTAATTGGAGAAGAATCTTACCCATCTATCCAACTTCACCCATCGATAATCAAAAATAA
Upstream 100 bases:
>100_bases ATCCAAAAATTCACATCAATATTTTTGATATGCCTGAGAGGGAAATAGGAATAGAGTGGGATGTAAGGGGATGCGATAGT TTTAAACTTGATCAAGGTAA
Downstream 100 bases:
>100_bases AAATTCATAACTTCCAATATTTTCTAATCTTTTAGAGATAACTTAATTGCAGGTATTCTGTATTAGGCCTTCATCCAACA TTGAATTTATAGATATTTGA
Product: putative molecular chaperone
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MEQAASWRRNSKIIVIINKLQNFYTSKSKYLLALHSTSESFGIAVKDIEEKETIIKSEVFNIGRALSNKLFSCIETILPR KFWKQIIRISVAKGPGSYTSTRLTISMARTIAQQINCSLDSISSFHIMAPRLYKYLDQNQNFNPFWIKDILPRRGIVAGK YKLIKIHQESDFYEFSEIISPQLISNDKEINPSIKASNNIEKDIISLINFSEYCQKSNFHSNWRRILPIYPTSPIDNQK
Sequences:
>Translated_239_residues MEQAASWRRNSKIIVIINKLQNFYTSKSKYLLALHSTSESFGIAVKDIEEKETIIKSEVFNIGRALSNKLFSCIETILPR KFWKQIIRISVAKGPGSYTSTRLTISMARTIAQQINCSLDSISSFHIMAPRLYKYLDQNQNFNPFWIKDILPRRGIVAGK YKLIKIHQESDFYEFSEIISPQLISNDKEINPSIKASNNIEKDIISLINFSEYCQKSNFHSNWRRILPIYPTSPIDNQK >Mature_239_residues MEQAASWRRNSKIIVIINKLQNFYTSKSKYLLALHSTSESFGIAVKDIEEKETIIKSEVFNIGRALSNKLFSCIETILPR KFWKQIIRISVAKGPGSYTSTRLTISMARTIAQQINCSLDSISSFHIMAPRLYKYLDQNQNFNPFWIKDILPRRGIVAGK YKLIKIHQESDFYEFSEIISPQLISNDKEINPSIKASNNIEKDIISLINFSEYCQKSNFHSNWRRILPIYPTSPIDNQK
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27674; Mature: 27674
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQAASWRRNSKIIVIINKLQNFYTSKSKYLLALHSTSESFGIAVKDIEEKETIIKSEVF CCCCHHHCCCCCEEEEEHHHHHHHCCCCCEEEEEECCCCCCCEEEECHHHHHHHHHHHHH NIGRALSNKLFSCIETILPRKFWKQIIRISVAKGPGSYTSTRLTISMARTIAQQINCSLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHH SISSFHIMAPRLYKYLDQNQNFNPFWIKDILPRRGIVAGKYKLIKIHQESDFYEFSEIIS HCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEECCEEEEEEECCCCHHHHHHHCC PQLISNDKEINPSIKASNNIEKDIISLINFSEYCQKSNFHSNWRRILPIYPTSPIDNQK CHHHCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHCCCCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure MEQAASWRRNSKIIVIINKLQNFYTSKSKYLLALHSTSESFGIAVKDIEEKETIIKSEVF CCCCHHHCCCCCEEEEEHHHHHHHCCCCCEEEEEECCCCCCCEEEECHHHHHHHHHHHHH NIGRALSNKLFSCIETILPRKFWKQIIRISVAKGPGSYTSTRLTISMARTIAQQINCSLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHH SISSFHIMAPRLYKYLDQNQNFNPFWIKDILPRRGIVAGKYKLIKIHQESDFYEFSEIIS HCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEECCEEEEEEECCCCHHHHHHHCC PQLISNDKEINPSIKASNNIEKDIISLINFSEYCQKSNFHSNWRRILPIYPTSPIDNQK CHHHCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHCCCCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA