Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

Click here to switch to the map view.

The map label for this gene is 124024924

Identifier: 124024924

GI number: 124024924

Start: 197109

End: 197828

Strand: Reverse

Name: 124024924

Synonym: NATL1_02111

Alternate gene names: NA

Gene position: 197828-197109 (Counterclockwise)

Preceding gene: 124024925

Following gene: 124024918

Centisome position: 10.61

GC content: 29.58

Gene sequence:

>720_bases
ATGGAGCAGGCTGCGTCCTGGAGAAGAAATTCCAAAATAATAGTTATAATCAATAAATTGCAAAATTTCTACACATCAAA
ATCAAAATATTTATTAGCTTTACATAGCACATCAGAGTCTTTTGGAATTGCAGTAAAGGATATAGAGGAAAAAGAAACAA
TAATAAAAAGCGAAGTATTCAATATTGGTCGCGCATTATCCAATAAATTATTTAGTTGTATAGAAACAATTCTCCCTAGA
AAATTTTGGAAGCAAATAATTCGAATTTCAGTAGCGAAAGGTCCCGGAAGTTATACCAGTACAAGATTAACAATCTCAAT
GGCTAGAACAATTGCCCAGCAGATTAATTGTTCACTCGATTCGATAAGTTCCTTTCATATAATGGCTCCAAGACTTTATA
AATATCTTGATCAAAATCAAAATTTCAATCCATTTTGGATAAAAGATATTTTACCACGCAGGGGCATTGTAGCTGGTAAA
TATAAACTAATTAAAATTCACCAAGAGTCAGATTTTTATGAATTTAGTGAAATAATTTCTCCACAATTAATAAGCAATGA
TAAAGAAATAAATCCATCAATTAAGGCTTCAAATAATATAGAAAAAGATATTATTTCGTTGATAAATTTTTCTGAATATT
GTCAGAAATCAAACTTTCATTCTAATTGGAGAAGAATCTTACCCATCTATCCAACTTCACCCATCGATAATCAAAAATAA

Upstream 100 bases:

>100_bases
ATCCAAAAATTCACATCAATATTTTTGATATGCCTGAGAGGGAAATAGGAATAGAGTGGGATGTAAGGGGATGCGATAGT
TTTAAACTTGATCAAGGTAA

Downstream 100 bases:

>100_bases
AAATTCATAACTTCCAATATTTTCTAATCTTTTAGAGATAACTTAATTGCAGGTATTCTGTATTAGGCCTTCATCCAACA
TTGAATTTATAGATATTTGA

Product: putative molecular chaperone

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MEQAASWRRNSKIIVIINKLQNFYTSKSKYLLALHSTSESFGIAVKDIEEKETIIKSEVFNIGRALSNKLFSCIETILPR
KFWKQIIRISVAKGPGSYTSTRLTISMARTIAQQINCSLDSISSFHIMAPRLYKYLDQNQNFNPFWIKDILPRRGIVAGK
YKLIKIHQESDFYEFSEIISPQLISNDKEINPSIKASNNIEKDIISLINFSEYCQKSNFHSNWRRILPIYPTSPIDNQK

Sequences:

>Translated_239_residues
MEQAASWRRNSKIIVIINKLQNFYTSKSKYLLALHSTSESFGIAVKDIEEKETIIKSEVFNIGRALSNKLFSCIETILPR
KFWKQIIRISVAKGPGSYTSTRLTISMARTIAQQINCSLDSISSFHIMAPRLYKYLDQNQNFNPFWIKDILPRRGIVAGK
YKLIKIHQESDFYEFSEIISPQLISNDKEINPSIKASNNIEKDIISLINFSEYCQKSNFHSNWRRILPIYPTSPIDNQK
>Mature_239_residues
MEQAASWRRNSKIIVIINKLQNFYTSKSKYLLALHSTSESFGIAVKDIEEKETIIKSEVFNIGRALSNKLFSCIETILPR
KFWKQIIRISVAKGPGSYTSTRLTISMARTIAQQINCSLDSISSFHIMAPRLYKYLDQNQNFNPFWIKDILPRRGIVAGK
YKLIKIHQESDFYEFSEIISPQLISNDKEINPSIKASNNIEKDIISLINFSEYCQKSNFHSNWRRILPIYPTSPIDNQK

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27674; Mature: 27674

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQAASWRRNSKIIVIINKLQNFYTSKSKYLLALHSTSESFGIAVKDIEEKETIIKSEVF
CCCCHHHCCCCCEEEEEHHHHHHHCCCCCEEEEEECCCCCCCEEEECHHHHHHHHHHHHH
NIGRALSNKLFSCIETILPRKFWKQIIRISVAKGPGSYTSTRLTISMARTIAQQINCSLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHH
SISSFHIMAPRLYKYLDQNQNFNPFWIKDILPRRGIVAGKYKLIKIHQESDFYEFSEIIS
HCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEECCEEEEEEECCCCHHHHHHHCC
PQLISNDKEINPSIKASNNIEKDIISLINFSEYCQKSNFHSNWRRILPIYPTSPIDNQK
CHHHCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHCCCCCCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MEQAASWRRNSKIIVIINKLQNFYTSKSKYLLALHSTSESFGIAVKDIEEKETIIKSEVF
CCCCHHHCCCCCEEEEEHHHHHHHCCCCCEEEEEECCCCCCCEEEECHHHHHHHHHHHHH
NIGRALSNKLFSCIETILPRKFWKQIIRISVAKGPGSYTSTRLTISMARTIAQQINCSLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHH
SISSFHIMAPRLYKYLDQNQNFNPFWIKDILPRRGIVAGKYKLIKIHQESDFYEFSEIIS
HCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEECCEEEEEEECCCCHHHHHHHCC
PQLISNDKEINPSIKASNNIEKDIISLINFSEYCQKSNFHSNWRRILPIYPTSPIDNQK
CHHHCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHCCCCCCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA