Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is ycf34

Identifier: 124024925

GI number: 124024925

Start: 197789

End: 198040

Strand: Reverse

Name: ycf34

Synonym: NATL1_02121

Alternate gene names: NA

Gene position: 198040-197789 (Counterclockwise)

Preceding gene: 124024928

Following gene: 124024924

Centisome position: 10.62

GC content: 38.1

Gene sequence:

>252_bases
ATGTGCATATGTGTTGATTGTGCTTGGGTAGATAGTTGTAAGACCTACTACACAGTTGAAGAAAATCATGGAGTCAGGCA
TCTCTCTGAAAATCCAGATTTTCAGGGAAATAATCCAAAAATTCACATCAATATTTTTGATATGCCTGAGAGGGAAATAG
GAATAGAGTGGGATGTAAGGGGATGCGATAGTTTTAAACTTGATCAAGGTAAATGGAGCAGGCTGCGTCCTGGAGAAGAA
ATTCCAAAATAA

Upstream 100 bases:

>100_bases
GATATAGGCCAATCTTTTGGATTTAAATCTCCAAAAAGATCATTTGATAGTAATGTGTGTTGAATTATCAAATTGACACC
TAAACTTTCCTTGAATAGTT

Downstream 100 bases:

>100_bases
TAGTTATAATCAATAAATTGCAAAATTTCTACACATCAAAATCAAAATATTTATTAGCTTTACATAGCACATCAGAGTCT
TTTGGAATTGCAGTAAAGGA

Product: putative Ycf34

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MCICVDCAWVDSCKTYYTVEENHGVRHLSENPDFQGNNPKIHINIFDMPEREIGIEWDVRGCDSFKLDQGKWSRLRPGEE
IPK

Sequences:

>Translated_83_residues
MCICVDCAWVDSCKTYYTVEENHGVRHLSENPDFQGNNPKIHINIFDMPEREIGIEWDVRGCDSFKLDQGKWSRLRPGEE
IPK
>Mature_83_residues
MCICVDCAWVDSCKTYYTVEENHGVRHLSENPDFQGNNPKIHINIFDMPEREIGIEWDVRGCDSFKLDQGKWSRLRPGEE
IPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9698; Mature: 9698

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
6.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCICVDCAWVDSCKTYYTVEENHGVRHLSENPDFQGNNPKIHINIFDMPEREIGIEWDVR
CEEEEEECCCCCCEEEEEECCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCCCEEEECC
GCDSFKLDQGKWSRLRPGEEIPK
CCCCEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MCICVDCAWVDSCKTYYTVEENHGVRHLSENPDFQGNNPKIHINIFDMPEREIGIEWDVR
CEEEEEECCCCCCEEEEEECCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCCCEEEECC
GCDSFKLDQGKWSRLRPGEEIPK
CCCCEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA