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The map label for this gene is 124024737

Identifier: 124024737

GI number: 124024737

Start: 26760

End: 27836

Strand: Reverse

Name: 124024737

Synonym: NATL1_00241

Alternate gene names: NA

Gene position: 27836-26760 (Counterclockwise)

Preceding gene: 124024740

Following gene: 124024736

Centisome position: 1.49

GC content: 34.35

Gene sequence:

>1077_bases
ATGGCGAAAAAGATTTGCATTCTTGCCCTGATAACAATCCTATTTTCTTTAGGATCTCCATGGGTTAACCCTGCTTTTGC
AAGTCTTCCTAATGGTAATCGATTGAAAGATCCATACGCAATATTAAGAAATTCTTTACCGATTGACCAAAAAGAATTGC
GTGAATTACAAAACAAACTAGAAGAGACCAGTGAAGATCTTCGAGGAAGTCGATGGTCAGCTATCAGCAAAGCCACTTCA
AGAAGTCAATTTTTAGTAAGTAACAAAAAAAATCAAATTCTTGACTCAATGCCGGCGGAAAATAAAGAAAATGCGTCTAA
TTTACTTTCTAATTTAAAAGAAGAGCTTGATGAGTTAGGGCAAATAGCGAACGAAAAAAATAAAGTCTCATTTCTTGACG
TAAGGCGTCAAAGCTTAAAAACAATTGATGATATTGAATCTCTTCTTATTACAAAAAACTTCCCATATCAAATACCCAGT
GAATATAATCATTTACCAAGACTTTTAGGTAGAGCAAATGTAGAAATTAAAACATCAAAAGGAAGTATGAATGCAATTAT
TGATGGTTACAATGCTCCACTTACAGCTGGTGCTTTTATAGATCTTTCAATGAAAGGTTTTTACGATGGTTTACCAATCA
ATAGAGCTGAAGAGTTTTTTATTCTTCAAACTGGGGATCCTAAAGGAGAAACGATTGGATATATAGATCCTGATAATAAT
GAGTTGAGAAGAGTTCCATTAGAAATAAGAACATCTAGCTTGGAAGATACACTTTATGGAGAAACTTTTGAAGACGTTGG
TCTTTACACTGAGACCCCAGTACTTCCATTTGCAACTTTAGGAACACTTGGCTGGGCGCACTCTGACACTGATTTAAATG
ATGGTTCGTCGCAGTTTTTCTTCTTCTTATACGAAGCCGAATTAAATCCAGCTGGACGTAATCTTATTGATGGAAGAAAT
GCAGCTTTTGGCTACGTAATAGAAGGTTCAGAAATATTAAATAAACTTGGAGTAGATGATAAAATCATATCGATTACAGT
ATTAAATGGTTCAGAAAATCTAAAACTCAAAGCTTAA

Upstream 100 bases:

>100_bases
TCGTAGTGCCAGTGCGAAAGTCGTTACTTGAAATCATTCACACAAAAGATACCAATCGATCATAAGTCTGTGCCAAAGTC
ATGCAAAACATAGAATTAAA

Downstream 100 bases:

>100_bases
ATTCGAAATAAAGTGACAACTACTATTCAAGATTTAGGTGAAATAGAATTACTAAATCGTTTAAAAAAATTTATGCGCTG
TGGACAAATAGATGATGATG

Product: cyclophilin-type peptidyl-prolyl cis-trans isomerase

Products: NA

Alternate protein names: Putative thylakoid lumen PPIase; Putative thylakoid lumen rotamase [H]

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MAKKICILALITILFSLGSPWVNPAFASLPNGNRLKDPYAILRNSLPIDQKELRELQNKLEETSEDLRGSRWSAISKATS
RSQFLVSNKKNQILDSMPAENKENASNLLSNLKEELDELGQIANEKNKVSFLDVRRQSLKTIDDIESLLITKNFPYQIPS
EYNHLPRLLGRANVEIKTSKGSMNAIIDGYNAPLTAGAFIDLSMKGFYDGLPINRAEEFFILQTGDPKGETIGYIDPDNN
ELRRVPLEIRTSSLEDTLYGETFEDVGLYTETPVLPFATLGTLGWAHSDTDLNDGSSQFFFFLYEAELNPAGRNLIDGRN
AAFGYVIEGSEILNKLGVDDKIISITVLNGSENLKLKA

Sequences:

>Translated_358_residues
MAKKICILALITILFSLGSPWVNPAFASLPNGNRLKDPYAILRNSLPIDQKELRELQNKLEETSEDLRGSRWSAISKATS
RSQFLVSNKKNQILDSMPAENKENASNLLSNLKEELDELGQIANEKNKVSFLDVRRQSLKTIDDIESLLITKNFPYQIPS
EYNHLPRLLGRANVEIKTSKGSMNAIIDGYNAPLTAGAFIDLSMKGFYDGLPINRAEEFFILQTGDPKGETIGYIDPDNN
ELRRVPLEIRTSSLEDTLYGETFEDVGLYTETPVLPFATLGTLGWAHSDTDLNDGSSQFFFFLYEAELNPAGRNLIDGRN
AAFGYVIEGSEILNKLGVDDKIISITVLNGSENLKLKA
>Mature_357_residues
AKKICILALITILFSLGSPWVNPAFASLPNGNRLKDPYAILRNSLPIDQKELRELQNKLEETSEDLRGSRWSAISKATSR
SQFLVSNKKNQILDSMPAENKENASNLLSNLKEELDELGQIANEKNKVSFLDVRRQSLKTIDDIESLLITKNFPYQIPSE
YNHLPRLLGRANVEIKTSKGSMNAIIDGYNAPLTAGAFIDLSMKGFYDGLPINRAEEFFILQTGDPKGETIGYIDPDNNE
LRRVPLEIRTSSLEDTLYGETFEDVGLYTETPVLPFATLGTLGWAHSDTDLNDGSSQFFFFLYEAELNPAGRNLIDGRNA
AFGYVIEGSEILNKLGVDDKIISITVLNGSENLKLKA

Specific function: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Required for the assembly and stabilization of PSII [H]

COG id: COG0652

COG function: function code O; Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family

Gene ontology:

Cell location: Cellular thylakoid lumen (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PPIase cyclophilin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015891
- InterPro:   IPR002130
- InterPro:   IPR023222 [H]

Pfam domain/function: PF00160 Pro_isomerase [H]

EC number: =5.2.1.8 [H]

Molecular weight: Translated: 39858; Mature: 39726

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS50072 CSA_PPIASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKICILALITILFSLGSPWVNPAFASLPNGNRLKDPYAILRNSLPIDQKELRELQNKL
CCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHH
EETSEDLRGSRWSAISKATSRSQFLVSNKKNQILDSMPAENKENASNLLSNLKEELDELG
HHHHHHHCCCHHHHHHHHHCCCCEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
QIANEKNKVSFLDVRRQSLKTIDDIESLLITKNFPYQIPSEYNHLPRLLGRANVEIKTSK
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECC
GSMNAIIDGYNAPLTAGAFIDLSMKGFYDGLPINRAEEFFILQTGDPKGETIGYIDPDNN
CCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCC
ELRRVPLEIRTSSLEDTLYGETFEDVGLYTETPVLPFATLGTLGWAHSDTDLNDGSSQFF
CEEECCCEEECCCHHHHHCCCCHHHCCCEECCCCCCHHHHHHCCCCCCCCCCCCCCCEEE
FFLYEAELNPAGRNLIDGRNAAFGYVIEGSEILNKLGVDDKIISITVLNGSENLKLKA
EEEEEEECCCCCCCCCCCCCCEEEEEEECHHHHHHHCCCCEEEEEEEECCCCCCEEEC
>Mature Secondary Structure 
AKKICILALITILFSLGSPWVNPAFASLPNGNRLKDPYAILRNSLPIDQKELRELQNKL
CCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHH
EETSEDLRGSRWSAISKATSRSQFLVSNKKNQILDSMPAENKENASNLLSNLKEELDELG
HHHHHHHCCCHHHHHHHHHCCCCEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
QIANEKNKVSFLDVRRQSLKTIDDIESLLITKNFPYQIPSEYNHLPRLLGRANVEIKTSK
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECC
GSMNAIIDGYNAPLTAGAFIDLSMKGFYDGLPINRAEEFFILQTGDPKGETIGYIDPDNN
CCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCC
ELRRVPLEIRTSSLEDTLYGETFEDVGLYTETPVLPFATLGTLGWAHSDTDLNDGSSQFF
CEEECCCEEECCCHHHHHCCCCHHHCCCEECCCCCCHHHHHHCCCCCCCCCCCCCCCEEE
FFLYEAELNPAGRNLIDGRNAAFGYVIEGSEILNKLGVDDKIISITVLNGSENLKLKA
EEEEEEECCCCCCCCCCCCCCEEEEEEECHHHHHHHCCCCEEEEEEEECCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]