| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is thiL [H]
Identifier: 124024736
GI number: 124024736
Start: 25758
End: 26747
Strand: Reverse
Name: thiL [H]
Synonym: NATL1_00231
Alternate gene names: 124024736
Gene position: 26747-25758 (Counterclockwise)
Preceding gene: 124024737
Following gene: 124024734
Centisome position: 1.43
GC content: 34.95
Gene sequence:
>990_bases GTGACAACTACTATTCAAGATTTAGGTGAAATAGAATTACTAAATCGTTTAAAAAAATTTATGCGCTGTGGACAAATAGA TGATGATGTCGCAGAAATAAATAAAATAAATAAAAGCTTATTAATTAATACTGATTTACTTGTAGAAAAAATTCATTTTT CTGATGAAATATCTAATGCTAAAGATATTGGCTGGAAATGTATTACTACAAATATTTCTGATCTTATTTGCAGCGGCTCA GAAAATATAATTTCCTTTACTGTTGGACTTGTTTTGCCGCCAAACACACATTGGAAATGGGTTGAAAATCTATATGAAGG AATGTTGGAAGCGATGCAAGAATTTGGAGGAGAAATAATCGGTGGAGATTGCTCGTGCGGAGAAACAAAAATGATTTCAA TTACAGCAATTGGAGAAATGAATCTCCCCAGACTACATAGAGGAAATGCTTTACCTGGAGATTACATTGTTAGCACTGGA ATCCATGGATTAAGTAGGCTAGGCTTGGCACTTTTAACATCCGAGAAACTACCAAGTGAAGCCCCAGTAAGTCCTAAGCT AATTAATAAGGCTATCAACGCACACAAACGCCCCTATCCTGCTTTAAAAGCACTCAAAGCTTTAAAAGCTTGTAAACCTC AATCAACAAGTTGGAGAGCCGCAGGGACTGATAGCAGCGATGGACTAATTGAATCAATTAGAGGAATTTGCCAAGCAAGT AATTGTCAAGCAATTTTATCAAAAACTTCTATTCTCAAACATCCTGACTGGCCAGAAGATGATATTTGGGATGAATGGAT CCTGAATGGGGGTGAGGACTATGAATTAATACTGAGTCTTCCTAAAGACTGGGCAAAGTCATTATCAAATAAATTAAAAT CTGCCAAAATTATTGGGTTTATCAAAGAAGGTAAACCCAATATTTTCTGGGATAATTTAGAACAAACTAGAATTGACCAA TCAAGTCTATTTAGACATTTTAAACTCTAG
Upstream 100 bases:
>100_bases AGAAATATTAAATAAACTTGGAGTAGATGATAAAATCATATCGATTACAGTATTAAATGGTTCAGAAAATCTAAAACTCA AAGCTTAAATTCGAAATAAA
Downstream 100 bases:
>100_bases AAGTTAATTTTACTTCCATTTCTGAGCAACAATTTCAGCCAAATCAACAACCCTTTGACTGTAACCCCACTCATTGTCAT ACCAAGCTAAAACTTTCACC
Product: putative thiamine-monophosphate kinase
Products: NA
Alternate protein names: Thiamine-phosphate kinase [H]
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MTTTIQDLGEIELLNRLKKFMRCGQIDDDVAEINKINKSLLINTDLLVEKIHFSDEISNAKDIGWKCITTNISDLICSGS ENIISFTVGLVLPPNTHWKWVENLYEGMLEAMQEFGGEIIGGDCSCGETKMISITAIGEMNLPRLHRGNALPGDYIVSTG IHGLSRLGLALLTSEKLPSEAPVSPKLINKAINAHKRPYPALKALKALKACKPQSTSWRAAGTDSSDGLIESIRGICQAS NCQAILSKTSILKHPDWPEDDIWDEWILNGGEDYELILSLPKDWAKSLSNKLKSAKIIGFIKEGKPNIFWDNLEQTRIDQ SSLFRHFKL
Sequences:
>Translated_329_residues MTTTIQDLGEIELLNRLKKFMRCGQIDDDVAEINKINKSLLINTDLLVEKIHFSDEISNAKDIGWKCITTNISDLICSGS ENIISFTVGLVLPPNTHWKWVENLYEGMLEAMQEFGGEIIGGDCSCGETKMISITAIGEMNLPRLHRGNALPGDYIVSTG IHGLSRLGLALLTSEKLPSEAPVSPKLINKAINAHKRPYPALKALKALKACKPQSTSWRAAGTDSSDGLIESIRGICQAS NCQAILSKTSILKHPDWPEDDIWDEWILNGGEDYELILSLPKDWAKSLSNKLKSAKIIGFIKEGKPNIFWDNLEQTRIDQ SSLFRHFKL >Mature_328_residues TTTIQDLGEIELLNRLKKFMRCGQIDDDVAEINKINKSLLINTDLLVEKIHFSDEISNAKDIGWKCITTNISDLICSGSE NIISFTVGLVLPPNTHWKWVENLYEGMLEAMQEFGGEIIGGDCSCGETKMISITAIGEMNLPRLHRGNALPGDYIVSTGI HGLSRLGLALLTSEKLPSEAPVSPKLINKAINAHKRPYPALKALKALKACKPQSTSWRAAGTDSSDGLIESIRGICQASN CQAILSKTSILKHPDWPEDDIWDEWILNGGEDYELILSLPKDWAKSLSNKLKSAKIIGFIKEGKPNIFWDNLEQTRIDQS SLFRHFKL
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786619, Length=325, Percent_Identity=30.7692307692308, Blast_Score=107, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =2.7.4.16 [H]
Molecular weight: Translated: 36543; Mature: 36412
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTIQDLGEIELLNRLKKFMRCGQIDDDVAEINKINKSLLINTDLLVEKIHFSDEISNA CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHEECHHHHHHHHHHHHHHCCH KDIGWKCITTNISDLICSGSENIISFTVGLVLPPNTHWKWVENLYEGMLEAMQEFGGEII HHCCCEEEECCHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEE GGDCSCGETKMISITAIGEMNLPRLHRGNALPGDYIVSTGIHGLSRLGLALLTSEKLPSE CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC APVSPKLINKAINAHKRPYPALKALKALKACKPQSTSWRAAGTDSSDGLIESIRGICQAS CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHCCC NCQAILSKTSILKHPDWPEDDIWDEWILNGGEDYELILSLPKDWAKSLSNKLKSAKIIGF CHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHEEEE IKEGKPNIFWDNLEQTRIDQSSLFRHFKL EECCCCCCEECCCHHHHCCHHHHHHHHCC >Mature Secondary Structure TTTIQDLGEIELLNRLKKFMRCGQIDDDVAEINKINKSLLINTDLLVEKIHFSDEISNA CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHEECHHHHHHHHHHHHHHCCH KDIGWKCITTNISDLICSGSENIISFTVGLVLPPNTHWKWVENLYEGMLEAMQEFGGEII HHCCCEEEECCHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEE GGDCSCGETKMISITAIGEMNLPRLHRGNALPGDYIVSTGIHGLSRLGLALLTSEKLPSE CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC APVSPKLINKAINAHKRPYPALKALKALKACKPQSTSWRAAGTDSSDGLIESIRGICQAS CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHCCC NCQAILSKTSILKHPDWPEDDIWDEWILNGGEDYELILSLPKDWAKSLSNKLKSAKIIGF CHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHEEEE IKEGKPNIFWDNLEQTRIDQSSLFRHFKL EECCCCCCEECCCHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA