Click here to switch to the map view.

The map label for this gene is 124028116

Identifier: 124028116

GI number: 124028116

Start: 1264516

End: 1265103

Strand: Reverse

Name: 124028116

Synonym: Hbut_1259

Alternate gene names: NA

Gene position: 1265103-1264516 (Counterclockwise)

Preceding gene: 124028118

Following gene: 124028114

Centisome position: 75.88

GC content: 47.79

Gene sequence:

>588_bases
ATGACCCGTCCCGAGAAGCAACACAGGGAGAAACTCGTAAAAATTAATGAACTCGTTGTCGAGTGCCCAGTTTGCAGCCG
TAAGACTCTTAGGATAGAGGACTACCTATATGATATGCCTCTTGTAGGCAAGGTGTTACTAACCAGCGCCAAGTGCAACA
GTTGCGGTTATAGATTTACAGATGTACGCCTAGCTGAAGCGCATGGACCACGCAAGATAGTATACCGTGTTGAAAAGCCT
GAGGACTTGAATGTAATAGTCGTAAAGGCTTCGTCAGCCTCTATAGTAGTACCCGAACTAGACCTCAAGATGATGCCTGG
GCCCGCAGCAACGGGATTTATAACAACCGTTGAGGGTGTATTTGATAGGTTCCTTGAGGCTCTTGAAGCTGCTTGCTCCT
CGCCCGATGCTGATCGAGAAGCTTGCAAGAGGGCCCGCAAACTTATACTGGATGCAAAAGAGGGTAGAGTGAAGTTTACG
CTGGTAATAGTGGATCCGGAAGGGATTAGTGCTATAGTCTCCGAGAAGGCTAGGGTCGAACCTGTTAAAAGAGAGGAGCT
AGAGGAGCTAGGCTATATAGTTGCTTAG

Upstream 100 bases:

>100_bases
ATAAGGCCTAAAGACTAAAGTAAAGGTTTGAAGATAGTGATGCACATCGATATTTAATGGGAGCAAGTTGTGTCTTCACA
TAATGCCACGAGGAGGGACA

Downstream 100 bases:

>100_bases
TGCTATTCGACCTTGACCCTTATTCCGCCTTCCTCCTTTTCTTCCTCGGGCTTTTCTTTCTCGATCGTTACCTCAAGTAC
GCCATTCTTGTACTTTGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MTRPEKQHREKLVKINELVVECPVCSRKTLRIEDYLYDMPLVGKVLLTSAKCNSCGYRFTDVRLAEAHGPRKIVYRVEKP
EDLNVIVVKASSASIVVPELDLKMMPGPAATGFITTVEGVFDRFLEALEAACSSPDADREACKRARKLILDAKEGRVKFT
LVIVDPEGISAIVSEKARVEPVKREELEELGYIVA

Sequences:

>Translated_195_residues
MTRPEKQHREKLVKINELVVECPVCSRKTLRIEDYLYDMPLVGKVLLTSAKCNSCGYRFTDVRLAEAHGPRKIVYRVEKP
EDLNVIVVKASSASIVVPELDLKMMPGPAATGFITTVEGVFDRFLEALEAACSSPDADREACKRARKLILDAKEGRVKFT
LVIVDPEGISAIVSEKARVEPVKREELEELGYIVA
>Mature_194_residues
TRPEKQHREKLVKINELVVECPVCSRKTLRIEDYLYDMPLVGKVLLTSAKCNSCGYRFTDVRLAEAHGPRKIVYRVEKPE
DLNVIVVKASSASIVVPELDLKMMPGPAATGFITTVEGVFDRFLEALEAACSSPDADREACKRARKLILDAKEGRVKFTL
VIVDPEGISAIVSEKARVEPVKREELEELGYIVA

Specific function: Unknown

COG id: COG1779

COG function: function code R; C4-type Zn-finger protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ZPR1 family [H]

Homologues:

Organism=Homo sapiens, GI4508021, Length=148, Percent_Identity=31.7567567567568, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17565020, Length=111, Percent_Identity=41.4414414414414, Blast_Score=66, Evalue=9e-12,
Organism=Saccharomyces cerevisiae, GI6321650, Length=155, Percent_Identity=29.0322580645161, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004457
- InterPro:   IPR004470 [H]

Pfam domain/function: PF03367 zf-ZPR1 [H]

EC number: NA

Molecular weight: Translated: 21746; Mature: 21614

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRPEKQHREKLVKINELVVECPVCSRKTLRIEDYLYDMPLVGKVLLTSAKCNSCGYRFT
CCCCHHHHHHHHHHHHHHEEECCCCCCCEEEHHHHHHCCCHHHHHHHHCCCCCCCCCEEE
DVRLAEAHGPRKIVYRVEKPEDLNVIVVKASSASIVVPELDLKMMPGPAATGFITTVEGV
EEEEECCCCCEEEEEEECCCCCCEEEEEEECCCEEEEECCCEEECCCCCCCHHHHHHHHH
FDRFLEALEAACSSPDADREACKRARKLILDAKEGRVKFTLVIVDPEGISAIVSEKARVE
HHHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCEEEEEEEEECCCCHHHHHHCHHHCC
PVKREELEELGYIVA
CCCHHHHHHCCCCCC
>Mature Secondary Structure 
TRPEKQHREKLVKINELVVECPVCSRKTLRIEDYLYDMPLVGKVLLTSAKCNSCGYRFT
CCCHHHHHHHHHHHHHHEEECCCCCCCEEEHHHHHHCCCHHHHHHHHCCCCCCCCCEEE
DVRLAEAHGPRKIVYRVEKPEDLNVIVVKASSASIVVPELDLKMMPGPAATGFITTVEGV
EEEEECCCCCEEEEEEECCCCCCEEEEEEECCCEEEEECCCEEECCCCCCCHHHHHHHHH
FDRFLEALEAACSSPDADREACKRARKLILDAKEGRVKFTLVIVDPEGISAIVSEKARVE
HHHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCEEEEEEEEECCCCHHHHHHCHHHCC
PVKREELEELGYIVA
CCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]