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The map label for this gene is yciH [C]

Identifier: 124026956

GI number: 124026956

Start: 43200

End: 43511

Strand: Direct

Name: yciH [C]

Synonym: Hbut_0053

Alternate gene names: 124026956

Gene position: 43200-43511 (Clockwise)

Preceding gene: 124026954

Following gene: 124026957

Centisome position: 2.59

GC content: 49.68

Gene sequence:

>312_bases
ATGAGCGGGGAACTATCCTCGATATGTGGCGGACTTCCCCCAGAGCTGTGCGAGCAGCTTGCACGTGAACAGCAAATCAT
AAAGATAAAGCTCGAGAAGAGACGCTACGGCCGCGAAGTAACAATCATAGAGGGCCTTGACGAGCGTGAGGTTAACCTGA
AAAAGCTAGCCTCTGAACTCAAGTCTAGGCTAGCAACCGGCGGAACATACAAGAATGGTAGGATCGAACTCCAAGGAGAC
CATCGTCACCGCGTAAAGGAGATACTTGTTGAGATGGGGTTCCCGGAGGAAAACATAATAATAGTAGAGTAG

Upstream 100 bases:

>100_bases
TGGTAAGCTGGCCCCGAAATCCTTATAAGAATAGCTCTGGGGGGAGGTGCTGACTGGACACAAAGCGTAGAGACAACGCT
TGAAGGGTAGGTATACTCCC

Downstream 100 bases:

>100_bases
TAATAGTAGAGTAGTGATGTAGCGGCAGCATAGCTATACGTGCAGCCTAGCTGTTTTGTCGCTATATTAGGTAATGCTCA
AGCCCTGGTGGTGGCTGGGC

Product: translation initiation factor Sui1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MSGELSSICGGLPPELCEQLAREQQIIKIKLEKRRYGREVTIIEGLDEREVNLKKLASELKSRLATGGTYKNGRIELQGD
HRHRVKEILVEMGFPEENIIIVE

Sequences:

>Translated_103_residues
MSGELSSICGGLPPELCEQLAREQQIIKIKLEKRRYGREVTIIEGLDEREVNLKKLASELKSRLATGGTYKNGRIELQGD
HRHRVKEILVEMGFPEENIIIVE
>Mature_102_residues
SGELSSICGGLPPELCEQLAREQQIIKIKLEKRRYGREVTIIEGLDEREVNLKKLASELKSRLATGGTYKNGRIELQGDH
RHRVKEILVEMGFPEENIIIVE

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SUI1_HYPBU (A2BIX0)

Other databases:

- EMBL:   CP000493
- RefSeq:   YP_001012276.1
- ProteinModelPortal:   A2BIX0
- SMR:   A2BIX0
- STRING:   A2BIX0
- GeneID:   4782117
- GenomeReviews:   CP000493_GR
- KEGG:   hbu:Hbut_0053
- eggNOG:   arNOG11909
- HOGENOM:   HBG706849
- OMA:   QYEHEDS
- ProtClustDB:   PRK00939
- BioCyc:   HBUT415426:HBUT_0053-MONOMER
- HAMAP:   MF_00604
- InterPro:   IPR022851
- InterPro:   IPR005872
- InterPro:   IPR001950
- PIRSF:   PIRSF037511
- TIGRFAMs:   TIGR01158

Pfam domain/function: PF01253 SUI1; SSF55159 TIF_SUI1

EC number: NA

Molecular weight: Translated: 11729; Mature: 11598

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGELSSICGGLPPELCEQLAREQQIIKIKLEKRRYGREVTIIEGLDEREVNLKKLASEL
CCCCHHHHHCCCCHHHHHHHHHHHHEEEEEEHHHHCCCEEEEEECCCCCCCCHHHHHHHH
KSRLATGGTYKNGRIELQGDHRHRVKEILVEMGFPEENIIIVE
HHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEEC
>Mature Secondary Structure 
SGELSSICGGLPPELCEQLAREQQIIKIKLEKRRYGREVTIIEGLDEREVNLKKLASEL
CCCHHHHHCCCCHHHHHHHHHHHHEEEEEEHHHHCCCEEEEEECCCCCCCCHHHHHHHH
KSRLATGGTYKNGRIELQGDHRHRVKEILVEMGFPEENIIIVE
HHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA