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The map label for this gene is 123967075

Identifier: 123967075

GI number: 123967075

Start: 1628110

End: 1630113

Strand: Reverse

Name: 123967075

Synonym: P9515_18421

Alternate gene names: NA

Gene position: 1630113-1628110 (Counterclockwise)

Preceding gene: 123967076

Following gene: 123967073

Centisome position: 95.65

GC content: 36.38

Gene sequence:

>2004_bases
ATGAATTCAAATCAAACCAAATCAAATAATAATCAAAATTTATCTAAAGCAAAAAGATCGAATGAACCTGCGTTAAAAAT
TATTCCTTTAGGGGGTCTTCATGAAATAGGTAAAAACACATGTGTTTTTGAATATGAAGATGACATTATTTTGATAGATG
GCGGACTGGCTTTCCCAAGTGATGGCATGCATGGCGTGAATGTTGTTATGCCTGATACTTCATATTTACAAGCTAATTTA
AATAGATTTCGTGGGATGATAGTTACTCATGGTCACGAGGATCATATTGGTGGAATTTCTCATCATTTAAAGAAATTTAA
TATTCCTGTGATTTATGGACCACCTTTGGCAATCTCCATGCTTAAAGGAAAAATGGAAGAAGCTGGTGTGGCGAACAGGA
CAACAACACAGGCTATTAAACCAAGGCAAGTTGTAAGACTTGGTCAGCATTTTTCGTTGGAATTCATACGTAATACTCAT
TCTATTGGCGATAGTTTTTCTCTGGCTTTAACAACTCCAGTAGGTGTTGTTTTCTTTACTGGAGACTTTAAGTTTGATCA
TCTCCCACCGGATAAAAAACATGCTGACATTGAAAGAATGGCTTATTATGGAGATAAAGGTGTCCTTTGTTTACTTTCAG
ACTCTACAAATTCTGAAGTGAAGGGTTTTGTTCCCTCAGAAATTTCTGTTTTTCCAAATTTAGATCGAATAATATCTGAA
GCTAAAGGTAGGGTTATGCTTACCACTTTCGCTAGTTCAACACATAGGGTTGCGATGGTGATCCAATTAGCAATGAAGCA
TGGACGTAAAATTGGATTGATGGGAAGATCTATGCTTAACGTTGTAGGTAAATGTCGCGAATTAGGTTATATAAAGTGTC
CTGATGATCTTTTCTTTCCAATTAAAAGTATAAGAGATTTACCAGATAGAGAAACTTTGCTCTTAATGACAGGTAGTCAA
GGAGAGGTGATGGCTGCTTTAAGCAGAATTGGAAGAGATGAACATCCCCACGTTAAACTCAAAACTACTGATACAGTTAT
TTTTTCTTCCAGTCCAATACCAGGTAATACAATTTCTGTAGCTCATAGTATTGATAGATTAATTAAATTGGGAGCTAAAG
TTATTTATGGTAAAGAGCATGGAATTCATGTGTCTGGCCATGGATGTAGAGATGATCAAAGATTGATGTTGGCATTAATT
AAACCAAAGTTCTTTGTACCTGTTCATGGTGAGTATAGAATGCAGGTTTTGCATGGTAAAACAGCTGAATCGATGGGTGT
AGATCCCAACAATATATTAATCCTTGATAACGGAGATACAATTGAGCTTAGATCCGATTCCATGATACAAGGAGATCCAG
TAAAGTCTGGAATTGAAATGTTAGATAATACGAGGACTTGTGTCGTAGATGCAAGAGCTCTTAAAGAGAGACAGCAGTTA
GCCGATGATGGAATAGTTACCGTTTTAGCTCCAATAAGCACTGATGGTAATATGGTTGCTCCACCAAGAGTAAGTTTGAG
AGGCGTGGTGATTTCAGCTGATCCACGAAAAATGTCCATGTGGACCGAAAGAGAGATAAATTGGGTATTAGAAAACCGTT
GGAAACAATTATCAAGACAGACTAGTCCCAATAATTTTGAAGTTGATTGGATTGGGGTCCAAAGAGAGATTGAAAATGGT
TTAACTAGAAGAATGCGTAGAGAATTACAAGTCGAGCCATTAATTTTATGCTTAGCTCAACCAGCACCAAGCGGAACCCG
AGCTTACAAGCCTCAAATAGTTAATGAACAAAAGCAGCATCCTAAAAATAAACATTATCCAAATGTTAATAATCAAAATA
TAAATCGAAATCAAAATAATTTTAAAAATAATCAATCTACTAAAGATACAAATCAAGTAAGTAATAACCAACCTCAAAAA
GATTCTGTATCACCTTCAGTAGCTAAGACGGAAGATGCGCCTGCGGGTAGGACTAGGAGAAGAAGATCGGCAGTTACTTC
CTAG

Upstream 100 bases:

>100_bases
ATAATTCAAAATCTGTCTTTGTAAATGCTTCTCTTAGAGCTTTAATAAAGTTACTTTGAATAAAATGCCCACAATTTTAG
TTTGTTAAAATACTCTTATC

Downstream 100 bases:

>100_bases
TTTTCTCAATATTAATGTAATTCTTATCCCAAATAATCTTTAATCCATTTGGTAAATTTATTTGGCCTCTATGTTTTTTA
AAAATCGAAGAGACCAAATA

Product: metallo-beta-lactamase superfamily hydrolase

Products: NA

Alternate protein names: RNase J [H]

Number of amino acids: Translated: 667; Mature: 667

Protein sequence:

>667_residues
MNSNQTKSNNNQNLSKAKRSNEPALKIIPLGGLHEIGKNTCVFEYEDDIILIDGGLAFPSDGMHGVNVVMPDTSYLQANL
NRFRGMIVTHGHEDHIGGISHHLKKFNIPVIYGPPLAISMLKGKMEEAGVANRTTTQAIKPRQVVRLGQHFSLEFIRNTH
SIGDSFSLALTTPVGVVFFTGDFKFDHLPPDKKHADIERMAYYGDKGVLCLLSDSTNSEVKGFVPSEISVFPNLDRIISE
AKGRVMLTTFASSTHRVAMVIQLAMKHGRKIGLMGRSMLNVVGKCRELGYIKCPDDLFFPIKSIRDLPDRETLLLMTGSQ
GEVMAALSRIGRDEHPHVKLKTTDTVIFSSSPIPGNTISVAHSIDRLIKLGAKVIYGKEHGIHVSGHGCRDDQRLMLALI
KPKFFVPVHGEYRMQVLHGKTAESMGVDPNNILILDNGDTIELRSDSMIQGDPVKSGIEMLDNTRTCVVDARALKERQQL
ADDGIVTVLAPISTDGNMVAPPRVSLRGVVISADPRKMSMWTEREINWVLENRWKQLSRQTSPNNFEVDWIGVQREIENG
LTRRMRRELQVEPLILCLAQPAPSGTRAYKPQIVNEQKQHPKNKHYPNVNNQNINRNQNNFKNNQSTKDTNQVSNNQPQK
DSVSPSVAKTEDAPAGRTRRRRSAVTS

Sequences:

>Translated_667_residues
MNSNQTKSNNNQNLSKAKRSNEPALKIIPLGGLHEIGKNTCVFEYEDDIILIDGGLAFPSDGMHGVNVVMPDTSYLQANL
NRFRGMIVTHGHEDHIGGISHHLKKFNIPVIYGPPLAISMLKGKMEEAGVANRTTTQAIKPRQVVRLGQHFSLEFIRNTH
SIGDSFSLALTTPVGVVFFTGDFKFDHLPPDKKHADIERMAYYGDKGVLCLLSDSTNSEVKGFVPSEISVFPNLDRIISE
AKGRVMLTTFASSTHRVAMVIQLAMKHGRKIGLMGRSMLNVVGKCRELGYIKCPDDLFFPIKSIRDLPDRETLLLMTGSQ
GEVMAALSRIGRDEHPHVKLKTTDTVIFSSSPIPGNTISVAHSIDRLIKLGAKVIYGKEHGIHVSGHGCRDDQRLMLALI
KPKFFVPVHGEYRMQVLHGKTAESMGVDPNNILILDNGDTIELRSDSMIQGDPVKSGIEMLDNTRTCVVDARALKERQQL
ADDGIVTVLAPISTDGNMVAPPRVSLRGVVISADPRKMSMWTEREINWVLENRWKQLSRQTSPNNFEVDWIGVQREIENG
LTRRMRRELQVEPLILCLAQPAPSGTRAYKPQIVNEQKQHPKNKHYPNVNNQNINRNQNNFKNNQSTKDTNQVSNNQPQK
DSVSPSVAKTEDAPAGRTRRRRSAVTS
>Mature_667_residues
MNSNQTKSNNNQNLSKAKRSNEPALKIIPLGGLHEIGKNTCVFEYEDDIILIDGGLAFPSDGMHGVNVVMPDTSYLQANL
NRFRGMIVTHGHEDHIGGISHHLKKFNIPVIYGPPLAISMLKGKMEEAGVANRTTTQAIKPRQVVRLGQHFSLEFIRNTH
SIGDSFSLALTTPVGVVFFTGDFKFDHLPPDKKHADIERMAYYGDKGVLCLLSDSTNSEVKGFVPSEISVFPNLDRIISE
AKGRVMLTTFASSTHRVAMVIQLAMKHGRKIGLMGRSMLNVVGKCRELGYIKCPDDLFFPIKSIRDLPDRETLLLMTGSQ
GEVMAALSRIGRDEHPHVKLKTTDTVIFSSSPIPGNTISVAHSIDRLIKLGAKVIYGKEHGIHVSGHGCRDDQRLMLALI
KPKFFVPVHGEYRMQVLHGKTAESMGVDPNNILILDNGDTIELRSDSMIQGDPVKSGIEMLDNTRTCVVDARALKERQQL
ADDGIVTVLAPISTDGNMVAPPRVSLRGVVISADPRKMSMWTEREINWVLENRWKQLSRQTSPNNFEVDWIGVQREIENG
LTRRMRRELQVEPLILCLAQPAPSGTRAYKPQIVNEQKQHPKNKHYPNVNNQNINRNQNNFKNNQSTKDTNQVSNNQPQK
DSVSPSVAKTEDAPAGRTRRRRSAVTS

Specific function: Unknown

COG id: COG0595

COG function: function code R; Predicted hydrolase of the metallo-beta-lactamase superfamily

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. RNase J subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR011108
- InterPro:   IPR004613
- InterPro:   IPR001587 [H]

Pfam domain/function: PF00753 Lactamase_B; PF07521 RMMBL [H]

EC number: NA

Molecular weight: Translated: 74276; Mature: 74276

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS01292 UPF0036

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSNQTKSNNNQNLSKAKRSNEPALKIIPLGGLHEIGKNTCVFEYEDDIILIDGGLAFPS
CCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCHHHHCCCEEEEEECCCEEEEECCCCCCC
DGMHGVNVVMPDTSYLQANLNRFRGMIVTHGHEDHIGGISHHLKKFNIPVIYGPPLAISM
CCCCCCEEEECCHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCHHHHH
LKGKMEEAGVANRTTTQAIKPRQVVRLGQHFSLEFIRNTHSIGDSFSLALTTPVGVVFFT
HHCHHHHCCCCCCCHHHHCCCHHHHHHCCCCEEHHHHHHHCCCCCEEEEEECCEEEEEEE
GDFKFDHLPPDKKHADIERMAYYGDKGVLCLLSDSTNSEVKGFVPSEISVFPNLDRIISE
CCEEECCCCCCCCCCCHHHHHEECCCCEEEEEECCCCCCEECCCCCCEEECCCHHHHHHH
AKGRVMLTTFASSTHRVAMVIQLAMKHGRKIGLMGRSMLNVVGKCRELGYIKCPDDLFFP
CCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCEEECCHHHHHH
IKSIRDLPDRETLLLMTGSQGEVMAALSRIGRDEHPHVKLKTTDTVIFSSSPIPGNTISV
HHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEEEEECEEEEEECCCCCCCEEHH
AHSIDRLIKLGAKVIYGKEHGIHVSGHGCRDDQRLMLALIKPKFFVPVHGEYRMQVLHGK
HHHHHHHHHHCCEEEEECCCCEEECCCCCCCHHHHHHEEECCEEEEEECCCEEEEEEECC
TAESMGVDPNNILILDNGDTIELRSDSMIQGDPVKSGIEMLDNTRTCVVDARALKERQQL
CHHHCCCCCCCEEEEECCCEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHH
ADDGIVTVLAPISTDGNMVAPPRVSLRGVVISADPRKMSMWTEREINWVLENRWKQLSRQ
CCCCEEEEEEEECCCCCEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHC
TSPNNFEVDWIGVQREIENGLTRRMRRELQVEPLILCLAQPAPSGTRAYKPQIVNEQKQH
CCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHCC
PKNKHYPNVNNQNINRNQNNFKNNQSTKDTNQVSNNQPQKDSVSPSVAKTEDAPAGRTRR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHH
RRSAVTS
HHHCCCC
>Mature Secondary Structure
MNSNQTKSNNNQNLSKAKRSNEPALKIIPLGGLHEIGKNTCVFEYEDDIILIDGGLAFPS
CCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCHHHHCCCEEEEEECCCEEEEECCCCCCC
DGMHGVNVVMPDTSYLQANLNRFRGMIVTHGHEDHIGGISHHLKKFNIPVIYGPPLAISM
CCCCCCEEEECCHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCHHHHH
LKGKMEEAGVANRTTTQAIKPRQVVRLGQHFSLEFIRNTHSIGDSFSLALTTPVGVVFFT
HHCHHHHCCCCCCCHHHHCCCHHHHHHCCCCEEHHHHHHHCCCCCEEEEEECCEEEEEEE
GDFKFDHLPPDKKHADIERMAYYGDKGVLCLLSDSTNSEVKGFVPSEISVFPNLDRIISE
CCEEECCCCCCCCCCCHHHHHEECCCCEEEEEECCCCCCEECCCCCCEEECCCHHHHHHH
AKGRVMLTTFASSTHRVAMVIQLAMKHGRKIGLMGRSMLNVVGKCRELGYIKCPDDLFFP
CCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCEEECCHHHHHH
IKSIRDLPDRETLLLMTGSQGEVMAALSRIGRDEHPHVKLKTTDTVIFSSSPIPGNTISV
HHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEEEEECEEEEEECCCCCCCEEHH
AHSIDRLIKLGAKVIYGKEHGIHVSGHGCRDDQRLMLALIKPKFFVPVHGEYRMQVLHGK
HHHHHHHHHHCCEEEEECCCCEEECCCCCCCHHHHHHEEECCEEEEEECCCEEEEEEECC
TAESMGVDPNNILILDNGDTIELRSDSMIQGDPVKSGIEMLDNTRTCVVDARALKERQQL
CHHHCCCCCCCEEEEECCCEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHH
ADDGIVTVLAPISTDGNMVAPPRVSLRGVVISADPRKMSMWTEREINWVLENRWKQLSRQ
CCCCEEEEEEEECCCCCEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHC
TSPNNFEVDWIGVQREIENGLTRRMRRELQVEPLILCLAQPAPSGTRAYKPQIVNEQKQH
CCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHCC
PKNKHYPNVNNQNINRNQNNFKNNQSTKDTNQVSNNQPQKDSVSPSVAKTEDAPAGRTRR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHH
RRSAVTS
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]