| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123967073
Identifier: 123967073
GI number: 123967073
Start: 1626242
End: 1627051
Strand: Reverse
Name: 123967073
Synonym: P9515_18401
Alternate gene names: NA
Gene position: 1627051-1626242 (Counterclockwise)
Preceding gene: 123967075
Following gene: 123967072
Centisome position: 95.47
GC content: 32.22
Gene sequence:
>810_bases ATGTCACAATCAGGTAATAAATTCATCAAGTCTATGAGTCTGATTAATCTTTTGCCACAAAAAATCCAAGAAGAGCTTAG AAGTAAAACTTTACTAAAAGTTATTTCTGGATTAAGTAATTTTGAAATCAAATCTGTTAAGAAAATTTCAGAAGCAGCTT TTATGGGTGGAGCTGATTTAATTGATATAGCTTGTAAACCTGAATTAGTTGAATCCGCGATCGAGATATCATCATTACCA ATTTGTGTGAGTTCAATAGAGCCTAAATTATTTATAAATTCTGTAAAGGCAGGAGCTTCTCTAATCGAAATAGGAAATTA CGATAGTTTTTATGAGAAAGGTATTACTTTTTCGGAGGACAAAATTTTAAATCTTACAAAAGAAACTAAAGATTTTTTAC CTAATATTCCTCTATCAGTTACAGTCCCTCATACTATGCCTATTGATAAGCAAGTTGATCTTGCAGTGAAATTAGTTTTT GAAGGTGCTGATATTATTCAAACTGAAGGAGGTAAAAGTTCTAATCCGTACAGTTCAGGAATTCAAGGATTATTAGAAAA GTCAGTCCCTACATTGGCAGCTACTTATGCAATATTTAAGGAGTTTCAGCAACAATCTATTAATATTCCAATCATGAGTG CTTCTGGCTTAAGCGAAGTAACATGTCCTTTGGCAGTGTCATGTGGAGCTTCAGCAGTTGGAGTGGGATCCGTCGTTAAT AAATTAGATGATTTATTATCAATGATTGCTGTTGTTAGAGGCCTAAAAGAATCTTTGAAAAATTCAATGATTAAAGAAAA AATTTCCTAA
Upstream 100 bases:
>100_bases ATGATGCCAGGATGTCCAATTTTTTTGCGTTGAATTTTTATTAGACATATTGTTTAACTCAGATAATATTTTTAAAAAAA TTCACTGTTTTAATAAAACA
Downstream 100 bases:
>100_bases CATATAAAAACTTAAGCTATTAGCTGAATGAATAACTATAAGCTTCAAGCACCCTATGAACCAAATGGTGATCAACCTAA AGCCATTAAAAAGTTAGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MSQSGNKFIKSMSLINLLPQKIQEELRSKTLLKVISGLSNFEIKSVKKISEAAFMGGADLIDIACKPELVESAIEISSLP ICVSSIEPKLFINSVKAGASLIEIGNYDSFYEKGITFSEDKILNLTKETKDFLPNIPLSVTVPHTMPIDKQVDLAVKLVF EGADIIQTEGGKSSNPYSSGIQGLLEKSVPTLAATYAIFKEFQQQSINIPIMSASGLSEVTCPLAVSCGASAVGVGSVVN KLDDLLSMIAVVRGLKESLKNSMIKEKIS
Sequences:
>Translated_269_residues MSQSGNKFIKSMSLINLLPQKIQEELRSKTLLKVISGLSNFEIKSVKKISEAAFMGGADLIDIACKPELVESAIEISSLP ICVSSIEPKLFINSVKAGASLIEIGNYDSFYEKGITFSEDKILNLTKETKDFLPNIPLSVTVPHTMPIDKQVDLAVKLVF EGADIIQTEGGKSSNPYSSGIQGLLEKSVPTLAATYAIFKEFQQQSINIPIMSASGLSEVTCPLAVSCGASAVGVGSVVN KLDDLLSMIAVVRGLKESLKNSMIKEKIS >Mature_268_residues SQSGNKFIKSMSLINLLPQKIQEELRSKTLLKVISGLSNFEIKSVKKISEAAFMGGADLIDIACKPELVESAIEISSLPI CVSSIEPKLFINSVKAGASLIEIGNYDSFYEKGITFSEDKILNLTKETKDFLPNIPLSVTVPHTMPIDKQVDLAVKLVFE GADIIQTEGGKSSNPYSSGIQGLLEKSVPTLAATYAIFKEFQQQSINIPIMSASGLSEVTCPLAVSCGASAVGVGSVVNK LDDLLSMIAVVRGLKESLKNSMIKEKIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28876; Mature: 28745
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSGNKFIKSMSLINLLPQKIQEELRSKTLLKVISGLSNFEIKSVKKISEAAFMGGADL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCE IDIACKPELVESAIEISSLPICVSSIEPKLFINSVKAGASLIEIGNYDSFYEKGITFSED EEECCCHHHHHHHHHHHCCCEEHHCCCCHHHHHHHHCCCCEEEECCCHHHHHCCCCCCCC KILNLTKETKDFLPNIPLSVTVPHTMPIDKQVDLAVKLVFEGADIIQTEGGKSSNPYSSG HHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHEEECCCHHEECCCCCCCCCHHHH IQGLLEKSVPTLAATYAIFKEFQQQSINIPIMSASGLSEVTCPLAVSCGASAVGVGSVVN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHCCCHHCCCCCCHHHHHHHHH KLDDLLSMIAVVRGLKESLKNSMIKEKIS HHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SQSGNKFIKSMSLINLLPQKIQEELRSKTLLKVISGLSNFEIKSVKKISEAAFMGGADL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCE IDIACKPELVESAIEISSLPICVSSIEPKLFINSVKAGASLIEIGNYDSFYEKGITFSED EEECCCHHHHHHHHHHHCCCEEHHCCCCHHHHHHHHCCCCEEEECCCHHHHHCCCCCCCC KILNLTKETKDFLPNIPLSVTVPHTMPIDKQVDLAVKLVFEGADIIQTEGGKSSNPYSSG HHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHEEECCCHHEECCCCCCCCCHHHH IQGLLEKSVPTLAATYAIFKEFQQQSINIPIMSASGLSEVTCPLAVSCGASAVGVGSVVN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHCCCHHCCCCCCHHHHHHHHH KLDDLLSMIAVVRGLKESLKNSMIKEKIS HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA