| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966754
Identifier: 123966754
GI number: 123966754
Start: 1353011
End: 1353577
Strand: Reverse
Name: 123966754
Synonym: P9515_15211
Alternate gene names: NA
Gene position: 1353577-1353011 (Counterclockwise)
Preceding gene: 123966755
Following gene: 123966748
Centisome position: 79.43
GC content: 35.1
Gene sequence:
>567_bases GTGCTTTCAACAATTCTTACAAAATCATTCAGCAAAGATACAGCTTTATTAATTTTAAGAGTTATAACTGGTACAGTTTT AATTCATCATGGTTTTGAAAAGCTTGCAAATATTGAAAATTTTGCTGATGCCTTTGTCAGACCTTTACACCTACCTTTCC CAATATTCTTGTCATACGTGGCCGCATTTTCAGAGATAGGAGGCAGCTGGCTACTAATTCTTGGTTTAGCCACAAGATTT GGTGCGCTCGCAATCGTTGGCACTATATCAGTAGCCATTTATCATGCGCTCGTCACAGCAGGTTTTAATATTTTTTTATT AGAACTTTTGCTTTTATATTTTGCCTCTTCAACTTGTATTGCTTTAACCGGTCCTGGGGATTTCTCGATTGATGAGGTTA TAATTAGAATATTGAGATCTGAATCTGAGGACGAAGAAGTTCAACAGGTGTCTGTAAAATCAAAAGCTAAAATTGGAAAA TCTACAGTTAAAGATGAAGAGGAACCCAACAAAGGTGGTATTTTTCAATTCTTACAAGCTAATTTACTTTCAGATACATC TAACTAA
Upstream 100 bases:
>100_bases TGCCATCTAAGTATATATACTTAATTAAGGATCAGTTTGGTGGTTTAATCCACGATGGATAATGTGGCTAGTTATTTTTA CTTAAGAAATACGTTTTATA
Downstream 100 bases:
>100_bases ACCTTAGGATAGAGATTACTAACAAGTTCTTGTCTTCTTCTAATAGAACTTAACCTTTCAAACCTTATTTTTAAAGTTGC TTCAGTTAAACTTAAAAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MLSTILTKSFSKDTALLILRVITGTVLIHHGFEKLANIENFADAFVRPLHLPFPIFLSYVAAFSEIGGSWLLILGLATRF GALAIVGTISVAIYHALVTAGFNIFLLELLLLYFASSTCIALTGPGDFSIDEVIIRILRSESEDEEVQQVSVKSKAKIGK STVKDEEEPNKGGIFQFLQANLLSDTSN
Sequences:
>Translated_188_residues MLSTILTKSFSKDTALLILRVITGTVLIHHGFEKLANIENFADAFVRPLHLPFPIFLSYVAAFSEIGGSWLLILGLATRF GALAIVGTISVAIYHALVTAGFNIFLLELLLLYFASSTCIALTGPGDFSIDEVIIRILRSESEDEEVQQVSVKSKAKIGK STVKDEEEPNKGGIFQFLQANLLSDTSN >Mature_188_residues MLSTILTKSFSKDTALLILRVITGTVLIHHGFEKLANIENFADAFVRPLHLPFPIFLSYVAAFSEIGGSWLLILGLATRF GALAIVGTISVAIYHALVTAGFNIFLLELLLLYFASSTCIALTGPGDFSIDEVIIRILRSESEDEEVQQVSVKSKAKIGK STVKDEEEPNKGGIFQFLQANLLSDTSN
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20477; Mature: 20477
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSTILTKSFSKDTALLILRVITGTVLIHHGFEKLANIENFADAFVRPLHLPFPIFLSYV CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH AAFSEIGGSWLLILGLATRFGALAIVGTISVAIYHALVTAGFNIFLLELLLLYFASSTCI HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEE ALTGPGDFSIDEVIIRILRSESEDEEVQQVSVKSKAKIGKSTVKDEEEPNKGGIFQFLQA EEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH NLLSDTSN HHHHCCCC >Mature Secondary Structure MLSTILTKSFSKDTALLILRVITGTVLIHHGFEKLANIENFADAFVRPLHLPFPIFLSYV CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH AAFSEIGGSWLLILGLATRFGALAIVGTISVAIYHALVTAGFNIFLLELLLLYFASSTCI HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEE ALTGPGDFSIDEVIIRILRSESEDEEVQQVSVKSKAKIGKSTVKDEEEPNKGGIFQFLQA EEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH NLLSDTSN HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA