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The map label for this gene is aapJ [H]

Identifier: 123966465

GI number: 123966465

Start: 1087294

End: 1088343

Strand: Reverse

Name: aapJ [H]

Synonym: P9515_12321

Alternate gene names: 123966465

Gene position: 1088343-1087294 (Counterclockwise)

Preceding gene: 123966469

Following gene: 123966464

Centisome position: 63.86

GC content: 34.95

Gene sequence:

>1050_bases
ATGATAAATAGATTGTTCTTTGGAATTGCCGCTTTTGGTTTACTTTTAACTGGTTGCGCCAGCAATCAACAAGAAAATAT
TTCTAGGCTTTCCCTAATTCAAAAAAGAGATGAATTGATTTGCGGGGTCAGTGGAAAAATTCCAGGTTTTAGCTTTATTG
AAAGAGATGGTAAATATAAAGGATTAGATGTAGATATATGTAAAGCCTTTGCTTCAGCAATAATAGGAGATTCAGAAAAA
ATTCAGTTTAGACCTCTGACCGCTGCTGAAAGATTTTTAGCTATTAAAACAGGAGATATTGATTTGTTGTCAAGGAACAC
TACTTTCACTCTTAGTCGAGATTCTTTTGAGGGGAATGGGCTGACTTTCGCTCCTGTAGTTTTTCATGATGGACAGGGAT
TAATGGTTAAAAAAAATAGTGGTATTGACAGTATTCAAGAACTTGCAAATAAGTCTATATGTGTAGGCTCAGGAACAACC
ACAGAGCAAAATATTAATGATACTTTTGAAAGTCTCTCGCTTCCTTATGTCCCAATTAAATATCAAGATCTTAATCAGGT
AGTCGCAGGATATCTACAAGGTCGATGCGAAGCGATGACCTCTGATCGATCTCAATTAGCAGCAGCTAGATCAGGTTTTA
AGAATGCAAAAGATCATATCATTCTTGATAATGTTTTAAGTAAGGAGCCTTTAGCTCCAGCATCAAATGGGTCTGAACAG
AAACTTGCAGATGCTATGAGATGGACCATTTTTGCTTTGATTGCAGCTGAAGAGCAAGGGATAACCCAATTAAATATTGA
TGATAAGGTTCAGCTCGCAAAAAATAATCCACAATTAAAATCATTAAGAAGATTCCTTGGAATTGATGGAGGATTAGGAG
AAAAAATTGGATTAAGAAATGACTTCGTAGTAAATGTTATAAAAGCTACAGGAAATTATGGTGAGATTTATGATAGAAAT
CTTGGGAAAGACAGTGATGTGCCTATTCCAAGAGGATTAAATAAAATTTATAGTAAAGGTGGTTTGCATATCTCTCCACC
ATTTAATTAA

Upstream 100 bases:

>100_bases
ACTACTTCTATGACAGTAGGGAAAAATATCTAAAATATTTTTATTAATTGACATGCACATTAAAATTAAGAAAAATTTAA
AATTAATTTATTAAAAAAAT

Downstream 100 bases:

>100_bases
TTTCAACATATGTTGAAGAATGAGTAAAAATAAAAAAATAGTTCTTCAGTTTGTTTTGATGTTTGCCGTTCTTGGTTTTT
TAGGGATATTAATTAATAAT

Product: ABC transporter for amino acids, substrate binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MINRLFFGIAAFGLLLTGCASNQQENISRLSLIQKRDELICGVSGKIPGFSFIERDGKYKGLDVDICKAFASAIIGDSEK
IQFRPLTAAERFLAIKTGDIDLLSRNTTFTLSRDSFEGNGLTFAPVVFHDGQGLMVKKNSGIDSIQELANKSICVGSGTT
TEQNINDTFESLSLPYVPIKYQDLNQVVAGYLQGRCEAMTSDRSQLAAARSGFKNAKDHIILDNVLSKEPLAPASNGSEQ
KLADAMRWTIFALIAAEEQGITQLNIDDKVQLAKNNPQLKSLRRFLGIDGGLGEKIGLRNDFVVNVIKATGNYGEIYDRN
LGKDSDVPIPRGLNKIYSKGGLHISPPFN

Sequences:

>Translated_349_residues
MINRLFFGIAAFGLLLTGCASNQQENISRLSLIQKRDELICGVSGKIPGFSFIERDGKYKGLDVDICKAFASAIIGDSEK
IQFRPLTAAERFLAIKTGDIDLLSRNTTFTLSRDSFEGNGLTFAPVVFHDGQGLMVKKNSGIDSIQELANKSICVGSGTT
TEQNINDTFESLSLPYVPIKYQDLNQVVAGYLQGRCEAMTSDRSQLAAARSGFKNAKDHIILDNVLSKEPLAPASNGSEQ
KLADAMRWTIFALIAAEEQGITQLNIDDKVQLAKNNPQLKSLRRFLGIDGGLGEKIGLRNDFVVNVIKATGNYGEIYDRN
LGKDSDVPIPRGLNKIYSKGGLHISPPFN
>Mature_349_residues
MINRLFFGIAAFGLLLTGCASNQQENISRLSLIQKRDELICGVSGKIPGFSFIERDGKYKGLDVDICKAFASAIIGDSEK
IQFRPLTAAERFLAIKTGDIDLLSRNTTFTLSRDSFEGNGLTFAPVVFHDGQGLMVKKNSGIDSIQELANKSICVGSGTT
TEQNINDTFESLSLPYVPIKYQDLNQVVAGYLQGRCEAMTSDRSQLAAARSGFKNAKDHIILDNVLSKEPLAPASNGSEQ
KLADAMRWTIFALIAAEEQGITQLNIDDKVQLAKNNPQLKSLRRFLGIDGGLGEKIGLRNDFVVNVIKATGNYGEIYDRN
LGKDSDVPIPRGLNKIYSKGGLHISPPFN

Specific function: Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 38070; Mature: 38070

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINRLFFGIAAFGLLLTGCASNQQENISRLSLIQKRDELICGVSGKIPGFSFIERDGKYK
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHCCCCCC
GLDVDICKAFASAIIGDSEKIQFRPLTAAERFLAIKTGDIDLLSRNTTFTLSRDSFEGNG
CCCHHHHHHHHHHHCCCCCCEEEEECHHHCEEEEEEECCEEEEECCCEEEEECCCCCCCC
LTFAPVVFHDGQGLMVKKNSGIDSIQELANKSICVGSGTTTEQNINDTFESLSLPYVPIK
EEEEEEEEECCCEEEEECCCCHHHHHHHHCCCEEECCCCCCCCCHHHHHHHCCCCCEEEE
YQDLNQVVAGYLQGRCEAMTSDRSQLAAARSGFKNAKDHIILDNVLSKEPLAPASNGSEQ
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEHHHHCCCCCCCCCCCCHH
KLADAMRWTIFALIAAEEQGITQLNIDDKVQLAKNNPQLKSLRRFLGIDGGLGEKIGLRN
HHHHHHHHHHHHEEECCCCCCEEECCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCC
DFVVNVIKATGNYGEIYDRNLGKDSDVPIPRGLNKIYSKGGLHISPPFN
CEEEEEEECCCCCCHHHCCCCCCCCCCCCCCCHHHHHHCCCCEECCCCC
>Mature Secondary Structure
MINRLFFGIAAFGLLLTGCASNQQENISRLSLIQKRDELICGVSGKIPGFSFIERDGKYK
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHCCCCCC
GLDVDICKAFASAIIGDSEKIQFRPLTAAERFLAIKTGDIDLLSRNTTFTLSRDSFEGNG
CCCHHHHHHHHHHHCCCCCCEEEEECHHHCEEEEEEECCEEEEECCCEEEEECCCCCCCC
LTFAPVVFHDGQGLMVKKNSGIDSIQELANKSICVGSGTTTEQNINDTFESLSLPYVPIK
EEEEEEEEECCCEEEEECCCCHHHHHHHHCCCEEECCCCCCCCCHHHHHHHCCCCCEEEE
YQDLNQVVAGYLQGRCEAMTSDRSQLAAARSGFKNAKDHIILDNVLSKEPLAPASNGSEQ
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEHHHHCCCCCCCCCCCCHH
KLADAMRWTIFALIAAEEQGITQLNIDDKVQLAKNNPQLKSLRRFLGIDGGLGEKIGLRN
HHHHHHHHHHHHEEECCCCCCEEECCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCC
DFVVNVIKATGNYGEIYDRNLGKDSDVPIPRGLNKIYSKGGLHISPPFN
CEEEEEEECCCCCCHHHCCCCCCCCCCCCCCCHHHHHHCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8898392 [H]