Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

Click here to switch to the map view.

The map label for this gene is 123966469

Identifier: 123966469

GI number: 123966469

Start: 1090305

End: 1090562

Strand: Reverse

Name: 123966469

Synonym: P9515_12361

Alternate gene names: NA

Gene position: 1090562-1090305 (Counterclockwise)

Preceding gene: 123966470

Following gene: 123966465

Centisome position: 63.99

GC content: 26.74

Gene sequence:

>258_bases
ATGAAATTGATTATTTTTTTGAATAAAGAAGTTAAAAAAAAATTATTTAGTGGATTAGCTGATTGGATTATTGATAATGA
GCCAAATTATCCCTCATTTGCACAATGTAAGTTATGGATTAAGAAACAAGATTCTCAATATGTAATTACTAAAAATGATG
AGAAAGAAATTTTAATGTTGTTGACCTATCTCCCTATGAGTCAACAAATGAATAATGTCTTGTATGCCAAATACCTCGAC
CAAATACTCTCTAAATAA

Upstream 100 bases:

>100_bases
GACCTTCAAAATGACCTCAAAAAAATGATACGTATATTAATTATGTATATTTCTAATGAAGATTAACTCGCAAGGTTAGA
GGTTAATTTTTAGTATTGTA

Downstream 100 bases:

>100_bases
ATGAAAAGCTTACTAATTGCGCCGCTTGAAATTTGAGTTGGAAACTTAGAAACGGTGGCTGGAATAGAGGAATAAAGCGC
TATGAGAAAAGAGGTCGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MKLIIFLNKEVKKKLFSGLADWIIDNEPNYPSFAQCKLWIKKQDSQYVITKNDEKEILMLLTYLPMSQQMNNVLYAKYLD
QILSK

Sequences:

>Translated_85_residues
MKLIIFLNKEVKKKLFSGLADWIIDNEPNYPSFAQCKLWIKKQDSQYVITKNDEKEILMLLTYLPMSQQMNNVLYAKYLD
QILSK
>Mature_85_residues
MKLIIFLNKEVKKKLFSGLADWIIDNEPNYPSFAQCKLWIKKQDSQYVITKNDEKEILMLLTYLPMSQQMNNVLYAKYLD
QILSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10119; Mature: 10119

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLIIFLNKEVKKKLFSGLADWIIDNEPNYPSFAQCKLWIKKQDSQYVITKNDEKEILML
CEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEEEECCCEEEEEECCCHHHHHH
LTYLPMSQQMNNVLYAKYLDQILSK
HHHCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLIIFLNKEVKKKLFSGLADWIIDNEPNYPSFAQCKLWIKKQDSQYVITKNDEKEILML
CEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEEEECCCEEEEEECCCHHHHHH
LTYLPMSQQMNNVLYAKYLDQILSK
HHHCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA