| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966409
Identifier: 123966409
GI number: 123966409
Start: 1031869
End: 1032477
Strand: Reverse
Name: 123966409
Synonym: P9515_11761
Alternate gene names: NA
Gene position: 1032477-1031869 (Counterclockwise)
Preceding gene: 123966410
Following gene: 123966406
Centisome position: 60.59
GC content: 17.9
Gene sequence:
>609_bases GTGATTAGCAAAAATTTAGTTGATAATTTTATTAAGTTTGTAATTAAATCTTGGTTGAAATCTGTATGTACAAGGATTGA GATTCATTCTTTAAATTTAATTTTAAATAAAAATAGTTTTGGCAAAATAGATGCAATCAAATTAGTTGCTGAAAATATTA TTTATGAAGGTTTGTATATAAATAAAATAATAATTAAAATCTTTGATTGTAATTTAAAGTTCAATTATAGAAATCATCTA GTATATTCTGAAGATTTAATTATTAATAGTTTTTTAACAATAGATGCAAGAAGTTTAGAAAATACTTTTTTCTCAAAAAA ATGTAAAAATCTAAGAAAAAAAATAGAGAAAGCACTTATAAAGAGTGGGTTTATATCAAATATATTTATTATTAATAACT TAATTAATTGTAACTATAATACAAATAAATTAAGTAATCAGATATTTCTATTGTTATATTTAAAGGAAAATTTGATTTTT CTAGAAGATATAAAAAATAAAAATAAGATATTCCTACCTTTAGATAAAAATATTAAAGTTAATTACTGCAATATTAAAAA TGAAGTAATAAATGTAGATTTATCATCAAAAGTAATTTTTGATGATTAA
Upstream 100 bases:
>100_bases CAAATTGATCAGTTAAATTTTATTGGGTTGAAAAATTGTGGTCATCTTCCGCATATAGATATGCCATCATTAACTGGTAA AATTATTTACGATTATTTTT
Downstream 100 bases:
>100_bases CTAAAATACTTTAAAATTATAATTATATAATAGATAACTGATGGGGTGAAAATATAACTATCAATTCTATCAAGAATGCC ACCATGACCAGGTAAAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MISKNLVDNFIKFVIKSWLKSVCTRIEIHSLNLILNKNSFGKIDAIKLVAENIIYEGLYINKIIIKIFDCNLKFNYRNHL VYSEDLIINSFLTIDARSLENTFFSKKCKNLRKKIEKALIKSGFISNIFIINNLINCNYNTNKLSNQIFLLLYLKENLIF LEDIKNKNKIFLPLDKNIKVNYCNIKNEVINVDLSSKVIFDD
Sequences:
>Translated_202_residues MISKNLVDNFIKFVIKSWLKSVCTRIEIHSLNLILNKNSFGKIDAIKLVAENIIYEGLYINKIIIKIFDCNLKFNYRNHL VYSEDLIINSFLTIDARSLENTFFSKKCKNLRKKIEKALIKSGFISNIFIINNLINCNYNTNKLSNQIFLLLYLKENLIF LEDIKNKNKIFLPLDKNIKVNYCNIKNEVINVDLSSKVIFDD >Mature_202_residues MISKNLVDNFIKFVIKSWLKSVCTRIEIHSLNLILNKNSFGKIDAIKLVAENIIYEGLYINKIIIKIFDCNLKFNYRNHL VYSEDLIINSFLTIDARSLENTFFSKKCKNLRKKIEKALIKSGFISNIFIINNLINCNYNTNKLSNQIFLLLYLKENLIF LEDIKNKNKIFLPLDKNIKVNYCNIKNEVINVDLSSKVIFDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23667; Mature: 23667
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISKNLVDNFIKFVIKSWLKSVCTRIEIHSLNLILNKNSFGKIDAIKLVAENIIYEGLYI CCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCEEH NKIIIKIFDCNLKFNYRNHLVYSEDLIINSFLTIDARSLENTFFSKKCKNLRKKIEKALI HEEEEEEEECCEEECCCCCEEEECCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH KSGFISNIFIINNLINCNYNTNKLSNQIFLLLYLKENLIFLEDIKNKNKIFLPLDKNIKV HCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEEEECCEEEEEECCCCCEEEEEECCCEEE NYCNIKNEVINVDLSSKVIFDD EEEECCCEEEEEECCCEEEECC >Mature Secondary Structure MISKNLVDNFIKFVIKSWLKSVCTRIEIHSLNLILNKNSFGKIDAIKLVAENIIYEGLYI CCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCEEH NKIIIKIFDCNLKFNYRNHLVYSEDLIINSFLTIDARSLENTFFSKKCKNLRKKIEKALI HEEEEEEEECCEEECCCCCEEEECCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH KSGFISNIFIINNLINCNYNTNKLSNQIFLLLYLKENLIFLEDIKNKNKIFLPLDKNIKV HCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEEEECCEEEEEECCCCCEEEEEECCCEEE NYCNIKNEVINVDLSSKVIFDD EEEECCCEEEEEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA