Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123966409

Identifier: 123966409

GI number: 123966409

Start: 1031869

End: 1032477

Strand: Reverse

Name: 123966409

Synonym: P9515_11761

Alternate gene names: NA

Gene position: 1032477-1031869 (Counterclockwise)

Preceding gene: 123966410

Following gene: 123966406

Centisome position: 60.59

GC content: 17.9

Gene sequence:

>609_bases
GTGATTAGCAAAAATTTAGTTGATAATTTTATTAAGTTTGTAATTAAATCTTGGTTGAAATCTGTATGTACAAGGATTGA
GATTCATTCTTTAAATTTAATTTTAAATAAAAATAGTTTTGGCAAAATAGATGCAATCAAATTAGTTGCTGAAAATATTA
TTTATGAAGGTTTGTATATAAATAAAATAATAATTAAAATCTTTGATTGTAATTTAAAGTTCAATTATAGAAATCATCTA
GTATATTCTGAAGATTTAATTATTAATAGTTTTTTAACAATAGATGCAAGAAGTTTAGAAAATACTTTTTTCTCAAAAAA
ATGTAAAAATCTAAGAAAAAAAATAGAGAAAGCACTTATAAAGAGTGGGTTTATATCAAATATATTTATTATTAATAACT
TAATTAATTGTAACTATAATACAAATAAATTAAGTAATCAGATATTTCTATTGTTATATTTAAAGGAAAATTTGATTTTT
CTAGAAGATATAAAAAATAAAAATAAGATATTCCTACCTTTAGATAAAAATATTAAAGTTAATTACTGCAATATTAAAAA
TGAAGTAATAAATGTAGATTTATCATCAAAAGTAATTTTTGATGATTAA

Upstream 100 bases:

>100_bases
CAAATTGATCAGTTAAATTTTATTGGGTTGAAAAATTGTGGTCATCTTCCGCATATAGATATGCCATCATTAACTGGTAA
AATTATTTACGATTATTTTT

Downstream 100 bases:

>100_bases
CTAAAATACTTTAAAATTATAATTATATAATAGATAACTGATGGGGTGAAAATATAACTATCAATTCTATCAAGAATGCC
ACCATGACCAGGTAAAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MISKNLVDNFIKFVIKSWLKSVCTRIEIHSLNLILNKNSFGKIDAIKLVAENIIYEGLYINKIIIKIFDCNLKFNYRNHL
VYSEDLIINSFLTIDARSLENTFFSKKCKNLRKKIEKALIKSGFISNIFIINNLINCNYNTNKLSNQIFLLLYLKENLIF
LEDIKNKNKIFLPLDKNIKVNYCNIKNEVINVDLSSKVIFDD

Sequences:

>Translated_202_residues
MISKNLVDNFIKFVIKSWLKSVCTRIEIHSLNLILNKNSFGKIDAIKLVAENIIYEGLYINKIIIKIFDCNLKFNYRNHL
VYSEDLIINSFLTIDARSLENTFFSKKCKNLRKKIEKALIKSGFISNIFIINNLINCNYNTNKLSNQIFLLLYLKENLIF
LEDIKNKNKIFLPLDKNIKVNYCNIKNEVINVDLSSKVIFDD
>Mature_202_residues
MISKNLVDNFIKFVIKSWLKSVCTRIEIHSLNLILNKNSFGKIDAIKLVAENIIYEGLYINKIIIKIFDCNLKFNYRNHL
VYSEDLIINSFLTIDARSLENTFFSKKCKNLRKKIEKALIKSGFISNIFIINNLINCNYNTNKLSNQIFLLLYLKENLIF
LEDIKNKNKIFLPLDKNIKVNYCNIKNEVINVDLSSKVIFDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23667; Mature: 23667

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISKNLVDNFIKFVIKSWLKSVCTRIEIHSLNLILNKNSFGKIDAIKLVAENIIYEGLYI
CCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCEEH
NKIIIKIFDCNLKFNYRNHLVYSEDLIINSFLTIDARSLENTFFSKKCKNLRKKIEKALI
HEEEEEEEECCEEECCCCCEEEECCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
KSGFISNIFIINNLINCNYNTNKLSNQIFLLLYLKENLIFLEDIKNKNKIFLPLDKNIKV
HCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEEEECCEEEEEECCCCCEEEEEECCCEEE
NYCNIKNEVINVDLSSKVIFDD
EEEECCCEEEEEECCCEEEECC
>Mature Secondary Structure
MISKNLVDNFIKFVIKSWLKSVCTRIEIHSLNLILNKNSFGKIDAIKLVAENIIYEGLYI
CCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCEEH
NKIIIKIFDCNLKFNYRNHLVYSEDLIINSFLTIDARSLENTFFSKKCKNLRKKIEKALI
HEEEEEEEECCEEECCCCCEEEECCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
KSGFISNIFIINNLINCNYNTNKLSNQIFLLLYLKENLIFLEDIKNKNKIFLPLDKNIKV
HCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEEEECCEEEEEECCCCCEEEEEECCCEEE
NYCNIKNEVINVDLSSKVIFDD
EEEECCCEEEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA