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The map label for this gene is todF [H]

Identifier: 123966410

GI number: 123966410

Start: 1032470

End: 1033369

Strand: Reverse

Name: todF [H]

Synonym: P9515_11771

Alternate gene names: 123966410

Gene position: 1033369-1032470 (Counterclockwise)

Preceding gene: 123966411

Following gene: 123966409

Centisome position: 60.64

GC content: 30.11

Gene sequence:

>900_bases
TTGAACAAAAATCTTTATAAAGACTTCAATAAATTTAATATTGATAATTTTGAAAAAATTAAATTTTCTATTCAAGATCC
ATTAGGCCAAAAAATATCTAATGATGTTAATTGGATAAAACTTGACGAAAAATGGAACCATGCAAAATTTCCTGTTGTAA
TTGGAGGTTCAGGAGACCCTGTACTGTTATTACATGGATTTGATAGTAGTTTTCTAGAATTCAGGAGAATTTATCCATTT
TTAAAAAATAAATTCCAGTTGATAATACCTGACTTATTAGGATTTGGGTTCACTCCTAGGATTGCTACACAGGAATATAA
TGCTCATAAAATAATTTCTAATCTTGAAGATATTATTAATACTTTAACTTTAAAAAATAAGTTAATGATTATTGGAGCTT
CTATGGGAGGATCTGTGGCTATAAACTTGGCGAAGGAAATTCCCGATCTTATTGATAAGATAATCCTGTTATCCCCTGCA
GGACTTTTTGGAGAATCCAAAATTATTCCGTTTCCATTTAACCAAATTGGAGCAAGCTTTTTAGGATTGCCTAAAGTTAG
AAAAAGTCTTTGCCGGCAAGCTTTTGCCTACCCAGATAAAAGTGTTGGTTCAATGGAGGAGCAAATTGCCTCAATTCATT
TAGGATGTTATGGTTGGAGAAATTCATTAGCTTCTTTTGCAAAAAGCGGAGGATTTGCAGGGTCATATAAATATATGAAA
AATATATCAATTAAAACTATTTGTGGAGAAAATGATAGAATTCTTGGGACAAAAGAAATCAAAAAAATAAAACAAATTGA
TCAGTTAAATTTTATTGGGTTGAAAAATTGTGGTCATCTTCCGCATATAGATATGCCATCATTAACTGGTAAAATTATTT
ACGATTATTTTTGTGATTAG

Upstream 100 bases:

>100_bases
AATCTGAGATTCATTTTTTACCTTTTAAAATCAGTCAACAAGATATTATTGAAGTTATTTCGAATTTTGAAAGGCAAGAA
ATTAAGATTTCATAAATTCT

Downstream 100 bases:

>100_bases
CAAAAATTTAGTTGATAATTTTATTAAGTTTGTAATTAAATCTTGGTTGAAATCTGTATGTACAAGGATTGAGATTCATT
CTTTAAATTTAATTTTAAAT

Product: Alpha/beta hydrolase fold

Products: NA

Alternate protein names: HOHH [H]

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MNKNLYKDFNKFNIDNFEKIKFSIQDPLGQKISNDVNWIKLDEKWNHAKFPVVIGGSGDPVLLLHGFDSSFLEFRRIYPF
LKNKFQLIIPDLLGFGFTPRIATQEYNAHKIISNLEDIINTLTLKNKLMIIGASMGGSVAINLAKEIPDLIDKIILLSPA
GLFGESKIIPFPFNQIGASFLGLPKVRKSLCRQAFAYPDKSVGSMEEQIASIHLGCYGWRNSLASFAKSGGFAGSYKYMK
NISIKTICGENDRILGTKEIKKIKQIDQLNFIGLKNCGHLPHIDMPSLTGKIIYDYFCD

Sequences:

>Translated_299_residues
MNKNLYKDFNKFNIDNFEKIKFSIQDPLGQKISNDVNWIKLDEKWNHAKFPVVIGGSGDPVLLLHGFDSSFLEFRRIYPF
LKNKFQLIIPDLLGFGFTPRIATQEYNAHKIISNLEDIINTLTLKNKLMIIGASMGGSVAINLAKEIPDLIDKIILLSPA
GLFGESKIIPFPFNQIGASFLGLPKVRKSLCRQAFAYPDKSVGSMEEQIASIHLGCYGWRNSLASFAKSGGFAGSYKYMK
NISIKTICGENDRILGTKEIKKIKQIDQLNFIGLKNCGHLPHIDMPSLTGKIIYDYFCD
>Mature_299_residues
MNKNLYKDFNKFNIDNFEKIKFSIQDPLGQKISNDVNWIKLDEKWNHAKFPVVIGGSGDPVLLLHGFDSSFLEFRRIYPF
LKNKFQLIIPDLLGFGFTPRIATQEYNAHKIISNLEDIINTLTLKNKLMIIGASMGGSVAINLAKEIPDLIDKIILLSPA
GLFGESKIIPFPFNQIGASFLGLPKVRKSLCRQAFAYPDKSVGSMEEQIASIHLGCYGWRNSLASFAKSGGFAGSYKYMK
NISIKTICGENDRILGTKEIKKIKQIDQLNFIGLKNCGHLPHIDMPSLTGKIIYDYFCD

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 33606; Mature: 33606

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKNLYKDFNKFNIDNFEKIKFSIQDPLGQKISNDVNWIKLDEKWNHAKFPVVIGGSGDP
CCCCHHHHHHHCCCCCCEEEEEEECCCHHHHHCCCCCEEEECCCCCCCCCCEEECCCCCC
VLLLHGFDSSFLEFRRIYPFLKNKFQLIIPDLLGFGFTPRIATQEYNAHKIISNLEDIIN
EEEEECCCHHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
TLTLKNKLMIIGASMGGSVAINLAKEIPDLIDKIILLSPAGLFGESKIIPFPFNQIGASF
HHHHCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
LGLPKVRKSLCRQAFAYPDKSVGSMEEQIASIHLGCYGWRNSLASFAKSGGFAGSYKYMK
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
NISIKTICGENDRILGTKEIKKIKQIDQLNFIGLKNCGHLPHIDMPSLTGKIIYDYFCD
CCEEEEEECCCCCEECHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MNKNLYKDFNKFNIDNFEKIKFSIQDPLGQKISNDVNWIKLDEKWNHAKFPVVIGGSGDP
CCCCHHHHHHHCCCCCCEEEEEEECCCHHHHHCCCCCEEEECCCCCCCCCCEEECCCCCC
VLLLHGFDSSFLEFRRIYPFLKNKFQLIIPDLLGFGFTPRIATQEYNAHKIISNLEDIIN
EEEEECCCHHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
TLTLKNKLMIIGASMGGSVAINLAKEIPDLIDKIILLSPAGLFGESKIIPFPFNQIGASF
HHHHCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
LGLPKVRKSLCRQAFAYPDKSVGSMEEQIASIHLGCYGWRNSLASFAKSGGFAGSYKYMK
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
NISIKTICGENDRILGTKEIKKIKQIDQLNFIGLKNCGHLPHIDMPSLTGKIIYDYFCD
CCEEEEEECCCCCEECHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1916282; 2670929 [H]