| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is opcA [H]
Identifier: 123966396
GI number: 123966396
Start: 1016594
End: 1017895
Strand: Reverse
Name: opcA [H]
Synonym: P9515_11631
Alternate gene names: 123966396
Gene position: 1017895-1016594 (Counterclockwise)
Preceding gene: 123966397
Following gene: 123966395
Centisome position: 59.73
GC content: 32.18
Gene sequence:
>1302_bases ATGAAACCACAATTAACACTTCAAACCCCACTAGAACTTCCTCCTCAAGAAATATCTAATTACTTAAATCAATTATGGAT TTCTGAAGATGAAGATAATTCTGGAGCCAATACTTTTACTTTGATGGTCTGGCAGCCTGCGTGGCTTGAACAATGCTTAG TTCAATCAGGCTTAATAAATGGACCAATCACTGGTACTTTAAGTCCAGAGATTATAAAAGTTGCTAAGAAAGTTATCGTT GATAAAAGGTTGCCTCATACGACTTCGATTAAAAGCGAAGAGTTATTAACTTCGTTGAAGGATAATTCTTTAAATAATGA TTATGAAGACCTGAGAGGGCAATTCTTTGAATCCTCAATAAGTACTCTAAATCCTAGAAGATTAATTACCCTAGCACCAA CTTTTAATAAAGAATCAGAGATTAAAACTTTTGTATCTGCCTATTGCCCACTAAGTGATAACGCTATAAATCAACCTATT TGTGGTGACTTGGTTGTTATAAGGGGGGATTCTAATTCTATAAAAAAGAAAGGATTGAAAATTATTGATGAACTATCCAT AAAAGAATTACCTACTTGGTTATGGTGGAATGGAAGCCTAGATGAATCCCCAGAAATTTTTAATTATTTTACAGACTATG GTATAAGGTTAATTGTTGATACTGCAAATGGCTCGCCTAATAGATGCTTAAAGATTCTTGATCAATCAATAAGGTCAAAT AAAGCTATTAATGATTTAAATTGGTTAAGACTTAAAAGTTGGCGTGAATCATTAGCAATGATTTTTGATCCTCCATCGAG GAGACCTATATTAGATCATATTTCGGATATTGACATAGATATTGCAGAAGGTAATTTGCTTCAAGCGTTATTTTTAATAT CATGGATTAGTGACAAATTAGAATGGGTATTTTCAAAAATAGATAAACATGGAGGATTAATAAAAATAGAATTCAAAAGA GACAATGGTGAGAAAATTTCAACATGTATAAACCCTTTACCTTTAGGTAATCCAAGTATTCATTCGGGACAAGTCATTGG ATTAAGGTTGATTTCCAAAATTAGTGAGGTTCAAAAAAATAATACTTGTGTAATTCTTGGATGTGAATCTGTTGAATGTA TGAGACTTGAAGCCGGAGGTATGGCTGATATGCAATTAATAGAACAAGTTGTCCCAAATGATTTTTCTTCATCAGAATTT GATGTTAGTAAGTTATTGGGGAGTAGTAGAGGAAATACTAGCCCACTTTTTGAAAATGCTATTAAGGTTGCAGTTCAAAT ATTTAATAGTCTTTGTAAATAA
Upstream 100 bases:
>100_bases TTACCTATTCACAAATACGAATCAATGACTTGGGGGCCTCCTGAATCAGATCAATTACTTTCTAAAGATAATATTTTCTG GCGCAGACCCTAACCTTATA
Downstream 100 bases:
>100_bases AAGTAATTTAATGTCTTGTGTAATATCTTCTCCTTCAACTGATAGTGGAAAAACTACTTTATCGCTGTTAATTTCTTGTT GGGCTTTTTCAAAAGGTATA
Product: putative glucose 6-phosphate dehydrogenase effector OpcA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MKPQLTLQTPLELPPQEISNYLNQLWISEDEDNSGANTFTLMVWQPAWLEQCLVQSGLINGPITGTLSPEIIKVAKKVIV DKRLPHTTSIKSEELLTSLKDNSLNNDYEDLRGQFFESSISTLNPRRLITLAPTFNKESEIKTFVSAYCPLSDNAINQPI CGDLVVIRGDSNSIKKKGLKIIDELSIKELPTWLWWNGSLDESPEIFNYFTDYGIRLIVDTANGSPNRCLKILDQSIRSN KAINDLNWLRLKSWRESLAMIFDPPSRRPILDHISDIDIDIAEGNLLQALFLISWISDKLEWVFSKIDKHGGLIKIEFKR DNGEKISTCINPLPLGNPSIHSGQVIGLRLISKISEVQKNNTCVILGCESVECMRLEAGGMADMQLIEQVVPNDFSSSEF DVSKLLGSSRGNTSPLFENAIKVAVQIFNSLCK
Sequences:
>Translated_433_residues MKPQLTLQTPLELPPQEISNYLNQLWISEDEDNSGANTFTLMVWQPAWLEQCLVQSGLINGPITGTLSPEIIKVAKKVIV DKRLPHTTSIKSEELLTSLKDNSLNNDYEDLRGQFFESSISTLNPRRLITLAPTFNKESEIKTFVSAYCPLSDNAINQPI CGDLVVIRGDSNSIKKKGLKIIDELSIKELPTWLWWNGSLDESPEIFNYFTDYGIRLIVDTANGSPNRCLKILDQSIRSN KAINDLNWLRLKSWRESLAMIFDPPSRRPILDHISDIDIDIAEGNLLQALFLISWISDKLEWVFSKIDKHGGLIKIEFKR DNGEKISTCINPLPLGNPSIHSGQVIGLRLISKISEVQKNNTCVILGCESVECMRLEAGGMADMQLIEQVVPNDFSSSEF DVSKLLGSSRGNTSPLFENAIKVAVQIFNSLCK >Mature_433_residues MKPQLTLQTPLELPPQEISNYLNQLWISEDEDNSGANTFTLMVWQPAWLEQCLVQSGLINGPITGTLSPEIIKVAKKVIV DKRLPHTTSIKSEELLTSLKDNSLNNDYEDLRGQFFESSISTLNPRRLITLAPTFNKESEIKTFVSAYCPLSDNAINQPI CGDLVVIRGDSNSIKKKGLKIIDELSIKELPTWLWWNGSLDESPEIFNYFTDYGIRLIVDTANGSPNRCLKILDQSIRSN KAINDLNWLRLKSWRESLAMIFDPPSRRPILDHISDIDIDIAEGNLLQALFLISWISDKLEWVFSKIDKHGGLIKIEFKR DNGEKISTCINPLPLGNPSIHSGQVIGLRLISKISEVQKNNTCVILGCESVECMRLEAGGMADMQLIEQVVPNDFSSSEF DVSKLLGSSRGNTSPLFENAIKVAVQIFNSLCK
Specific function: May be involved in the functional assembly of glucose 6- phosphate dehydrogenase [H]
COG id: COG3429
COG function: function code G; Glucose-6-P dehydrogenase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019297 - InterPro: IPR004555 - InterPro: IPR002477 [H]
Pfam domain/function: PF10128 OpcA_G6PD_assem; PF01471 PG_binding_1 [H]
EC number: NA
Molecular weight: Translated: 48561; Mature: 48561
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPQLTLQTPLELPPQEISNYLNQLWISEDEDNSGANTFTLMVWQPAWLEQCLVQSGLIN CCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHHHHHHHHCCCCC GPITGTLSPEIIKVAKKVIVDKRLPHTTSIKSEELLTSLKDNSLNNDYEDLRGQFFESSI CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH STLNPRRLITLAPTFNKESEIKTFVSAYCPLSDNAINQPICGDLVVIRGDSNSIKKKGLK HCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHH IIDELSIKELPTWLWWNGSLDESPEIFNYFTDYGIRLIVDTANGSPNRCLKILDQSIRSN HHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCC KAINDLNWLRLKSWRESLAMIFDPPSRRPILDHISDIDIDIAEGNLLQALFLISWISDKL CCCCCHHHHHHHHHHHHHHEEECCCCCCCHHHHHCCCEEEECCCHHHHHHHHHHHHHHHH EWVFSKIDKHGGLIKIEFKRDNGEKISTCINPLPLGNPSIHSGQVIGLRLISKISEVQKN HHHHHHHHHCCCEEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC NTCVILGCESVECMRLEAGGMADMQLIEQVVPNDFSSSEFDVSKLLGSSRGNTSPLFENA CCEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCHHHHHH IKVAVQIFNSLCK HHHHHHHHHHHCC >Mature Secondary Structure MKPQLTLQTPLELPPQEISNYLNQLWISEDEDNSGANTFTLMVWQPAWLEQCLVQSGLIN CCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHHHHHHHHCCCCC GPITGTLSPEIIKVAKKVIVDKRLPHTTSIKSEELLTSLKDNSLNNDYEDLRGQFFESSI CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH STLNPRRLITLAPTFNKESEIKTFVSAYCPLSDNAINQPICGDLVVIRGDSNSIKKKGLK HCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHH IIDELSIKELPTWLWWNGSLDESPEIFNYFTDYGIRLIVDTANGSPNRCLKILDQSIRSN HHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCC KAINDLNWLRLKSWRESLAMIFDPPSRRPILDHISDIDIDIAEGNLLQALFLISWISDKL CCCCCHHHHHHHHHHHHHHEEECCCCCCCHHHHHCCCEEEECCCHHHHHHHHHHHHHHHH EWVFSKIDKHGGLIKIEFKRDNGEKISTCINPLPLGNPSIHSGQVIGLRLISKISEVQKN HHHHHHHHHCCCEEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC NTCVILGCESVECMRLEAGGMADMQLIEQVVPNDFSSSEFDVSKLLGSSRGNTSPLFENA CCEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCHHHHHH IKVAVQIFNSLCK HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8566707 [H]