| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966250
Identifier: 123966250
GI number: 123966250
Start: 910185
End: 910496
Strand: Direct
Name: 123966250
Synonym: P9515_10171
Alternate gene names: NA
Gene position: 910185-910496 (Clockwise)
Preceding gene: 123966243
Following gene: 123966251
Centisome position: 53.41
GC content: 24.36
Gene sequence:
>312_bases ATGGGCCTATCAAAAAAGAATTTAGGTAAACTCAATACTTTTAAAAAAAATAATAATTTGTTTAACAATAACAATTTAAT TCAAAATCCTCAAAAACTTTCTAATCCGAAAAAATTTGAAGAACCTTCTAAGATTTTTTATTCGATAATTGATAACTCAG ATAATCTAAATGAGACAGTAGAAGCAAATCAATTATTAAAAAAAAGTGAGGACTGTTTTCATAATATAAATTCAAGAAAA CCTAGTTCCTCAAAAAATCTATCTATCGAAGATGAGCTTTATGACGAATTTAATTATCTTCTTGATGAATAG
Upstream 100 bases:
>100_bases TTGTCCAAATCTTTTTTTTTGATGATGGTTCTTAAAATTCATCCAAAAGAGAAATATTATGTTTAAATTAAATATATAGT TTATATCTTTATTAAATTGT
Downstream 100 bases:
>100_bases AGAAATTTTTCTTTTTTTTCATGCTTAAGGCTAACAGGCTATCAATATATGCTATTGGTAAAATTAAAAAAAAATGGATA AGAGAAGGAATTAATCAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MGLSKKNLGKLNTFKKNNNLFNNNNLIQNPQKLSNPKKFEEPSKIFYSIIDNSDNLNETVEANQLLKKSEDCFHNINSRK PSSSKNLSIEDELYDEFNYLLDE
Sequences:
>Translated_103_residues MGLSKKNLGKLNTFKKNNNLFNNNNLIQNPQKLSNPKKFEEPSKIFYSIIDNSDNLNETVEANQLLKKSEDCFHNINSRK PSSSKNLSIEDELYDEFNYLLDE >Mature_102_residues GLSKKNLGKLNTFKKNNNLFNNNNLIQNPQKLSNPKKFEEPSKIFYSIIDNSDNLNETVEANQLLKKSEDCFHNINSRKP SSSKNLSIEDELYDEFNYLLDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11972; Mature: 11841
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLSKKNLGKLNTFKKNNNLFNNNNLIQNPQKLSNPKKFEEPSKIFYSIIDNSDNLNETV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCHHHH EANQLLKKSEDCFHNINSRKPSSSKNLSIEDELYDEFNYLLDE HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure GLSKKNLGKLNTFKKNNNLFNNNNLIQNPQKLSNPKKFEEPSKIFYSIIDNSDNLNETV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCHHHH EANQLLKKSEDCFHNINSRKPSSSKNLSIEDELYDEFNYLLDE HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA