| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is ydgG [C]
Identifier: 123966243
GI number: 123966243
Start: 903191
End: 904234
Strand: Direct
Name: ydgG [C]
Synonym: P9515_10101
Alternate gene names: 123966243
Gene position: 903191-904234 (Clockwise)
Preceding gene: 123966242
Following gene: 123966250
Centisome position: 53.0
GC content: 27.97
Gene sequence:
>1044_bases TTGAGTAGTTCCTTCTATTTTAAATTTGCAGTAGTAATAATATCCTTTTTAATAGTATGGACATTAAGAGATTTCCTGCT TCTAATAATTTGTTCGTTAGTAATATCGAATGTAGTTAGTAATTTATGTAATCAAATACAATCCATTTTAAAACTACCAA GATTCTTTTCTTTATTAATTGTTATATTCGGAATATCATTCATAATATTTATTATTTCTATTCTTGTCTTACCTCCTTTC GTAAGAGAATTTAATGAGATTTTAATAGACATTCCAAATGGGTTATCAAAAATTAATGTATTAATCAACTCTAACCTTAA TAAATTTAACGATTTACTTTATGGTGAAGAATCTGAGAATGTAGTTGACATATTTAGCCTTGTTAACGATGTAGTTCCAA TTCCAGATGGAGCTACTATTGCCAAGGCGATTCAAGAAAGTTTTGTAAATATAATTAATTTAGCTGGAAACCTCGGGACT GGGCTGATAAGAATAATCTTTGTTTTAGTTGTAAGTTTTATGATATCAATTGAACCAAAAGCTTATAAAGAAGGAGTGCT CCTTATTGTTCCCAAAGTTTATAGAAATAAATCCAGAATTATATTGGACAAGTGTAATGTTGCATTAACAAATTGGACTT TTTCTATAGTTATAAGTTCATTATCTGTAGGTTTATTATCATTAATTGTTTTATCAATCTTAGATGTTAAATATGTAGTA TCAAATGCAATTATTGCTATGACCTTAAACATAATTCCTAACATCGGACCTGTTTTAAGTGGAATATTTCCAGTTTCAAT AGCACTTTTAGACAATTTTTGGAAACCAGTAGCTGTTTTTGGTGCCTACATAATCATTCAGAATATAGAAAGTTATGTCA TCATGCCTTTTATTTTGAAGAAAAAAACAAATTTACTTCCTGGGTTAACATTAATATCTCAATTTGGACTTACTTTCATC TTTGGACCTTTAGGTTTAGTCTTATCTTTGCCAATTGCGGTTGTAACACAAGTTTTAATCAAAGAGATCATTAATGAAAA TTAA
Upstream 100 bases:
>100_bases AAACTAAATCTGATTTTGATAGATTCATGAGATTTGCGAATAGTTATGCCAAATCAAATGGTTTAGGATATTCTGAAAAG AAGTAAGTAGATTGTAAAAG
Downstream 100 bases:
>100_bases GTAATTTCAGTTGTTTAATTTCCTATATAAATATGGATAAGAAAAAAGAATAAAGAAAGAGAGAGGATGTTTAGATAATG AAAAAAATAAAGAATTAAAG
Product: permease
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MSSSFYFKFAVVIISFLIVWTLRDFLLLIICSLVISNVVSNLCNQIQSILKLPRFFSLLIVIFGISFIIFIISILVLPPF VREFNEILIDIPNGLSKINVLINSNLNKFNDLLYGEESENVVDIFSLVNDVVPIPDGATIAKAIQESFVNIINLAGNLGT GLIRIIFVLVVSFMISIEPKAYKEGVLLIVPKVYRNKSRIILDKCNVALTNWTFSIVISSLSVGLLSLIVLSILDVKYVV SNAIIAMTLNIIPNIGPVLSGIFPVSIALLDNFWKPVAVFGAYIIIQNIESYVIMPFILKKKTNLLPGLTLISQFGLTFI FGPLGLVLSLPIAVVTQVLIKEIINEN
Sequences:
>Translated_347_residues MSSSFYFKFAVVIISFLIVWTLRDFLLLIICSLVISNVVSNLCNQIQSILKLPRFFSLLIVIFGISFIIFIISILVLPPF VREFNEILIDIPNGLSKINVLINSNLNKFNDLLYGEESENVVDIFSLVNDVVPIPDGATIAKAIQESFVNIINLAGNLGT GLIRIIFVLVVSFMISIEPKAYKEGVLLIVPKVYRNKSRIILDKCNVALTNWTFSIVISSLSVGLLSLIVLSILDVKYVV SNAIIAMTLNIIPNIGPVLSGIFPVSIALLDNFWKPVAVFGAYIIIQNIESYVIMPFILKKKTNLLPGLTLISQFGLTFI FGPLGLVLSLPIAVVTQVLIKEIINEN >Mature_346_residues SSSFYFKFAVVIISFLIVWTLRDFLLLIICSLVISNVVSNLCNQIQSILKLPRFFSLLIVIFGISFIIFIISILVLPPFV REFNEILIDIPNGLSKINVLINSNLNKFNDLLYGEESENVVDIFSLVNDVVPIPDGATIAKAIQESFVNIINLAGNLGTG LIRIIFVLVVSFMISIEPKAYKEGVLLIVPKVYRNKSRIILDKCNVALTNWTFSIVISSLSVGLLSLIVLSILDVKYVVS NAIIAMTLNIIPNIGPVLSGIFPVSIALLDNFWKPVAVFGAYIIIQNIESYVIMPFILKKKTNLLPGLTLISQFGLTFIF GPLGLVLSLPIAVVTQVLIKEIINEN
Specific function: Unknown
COG id: COG0628
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Integral membrane protein (Potential) [C]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38389; Mature: 38258
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSFYFKFAVVIISFLIVWTLRDFLLLIICSLVISNVVSNLCNQIQSILKLPRFFSLLI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIFGISFIIFIISILVLPPFVREFNEILIDIPNGLSKINVLINSNLNKFNDLLYGEESEN HHHHHHHHHHHHHHHHHCHHHHHHHHHHEECCCCHHHHHHHHCCCCHHHHHHHCCCCCCH VVDIFSLVNDVVPIPDGATIAKAIQESFVNIINLAGNLGTGLIRIIFVLVVSFMISIEPK HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCH AYKEGVLLIVPKVYRNKSRIILDKCNVALTNWTFSIVISSLSVGLLSLIVLSILDVKYVV HHHCCEEEEECHHHCCCCCEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNAIIAMTLNIIPNIGPVLSGIFPVSIALLDNFWKPVAVFGAYIIIQNIESYVIMPFILK HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH KKTNLLPGLTLISQFGLTFIFGPLGLVLSLPIAVVTQVLIKEIINEN HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSSFYFKFAVVIISFLIVWTLRDFLLLIICSLVISNVVSNLCNQIQSILKLPRFFSLLI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIFGISFIIFIISILVLPPFVREFNEILIDIPNGLSKINVLINSNLNKFNDLLYGEESEN HHHHHHHHHHHHHHHHHCHHHHHHHHHHEECCCCHHHHHHHHCCCCHHHHHHHCCCCCCH VVDIFSLVNDVVPIPDGATIAKAIQESFVNIINLAGNLGTGLIRIIFVLVVSFMISIEPK HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCH AYKEGVLLIVPKVYRNKSRIILDKCNVALTNWTFSIVISSLSVGLLSLIVLSILDVKYVV HHHCCEEEEECHHHCCCCCEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNAIIAMTLNIIPNIGPVLSGIFPVSIALLDNFWKPVAVFGAYIIIQNIESYVIMPFILK HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH KKTNLLPGLTLISQFGLTFIFGPLGLVLSLPIAVVTQVLIKEIINEN HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA