Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is ydgG [C]

Identifier: 123966243

GI number: 123966243

Start: 903191

End: 904234

Strand: Direct

Name: ydgG [C]

Synonym: P9515_10101

Alternate gene names: 123966243

Gene position: 903191-904234 (Clockwise)

Preceding gene: 123966242

Following gene: 123966250

Centisome position: 53.0

GC content: 27.97

Gene sequence:

>1044_bases
TTGAGTAGTTCCTTCTATTTTAAATTTGCAGTAGTAATAATATCCTTTTTAATAGTATGGACATTAAGAGATTTCCTGCT
TCTAATAATTTGTTCGTTAGTAATATCGAATGTAGTTAGTAATTTATGTAATCAAATACAATCCATTTTAAAACTACCAA
GATTCTTTTCTTTATTAATTGTTATATTCGGAATATCATTCATAATATTTATTATTTCTATTCTTGTCTTACCTCCTTTC
GTAAGAGAATTTAATGAGATTTTAATAGACATTCCAAATGGGTTATCAAAAATTAATGTATTAATCAACTCTAACCTTAA
TAAATTTAACGATTTACTTTATGGTGAAGAATCTGAGAATGTAGTTGACATATTTAGCCTTGTTAACGATGTAGTTCCAA
TTCCAGATGGAGCTACTATTGCCAAGGCGATTCAAGAAAGTTTTGTAAATATAATTAATTTAGCTGGAAACCTCGGGACT
GGGCTGATAAGAATAATCTTTGTTTTAGTTGTAAGTTTTATGATATCAATTGAACCAAAAGCTTATAAAGAAGGAGTGCT
CCTTATTGTTCCCAAAGTTTATAGAAATAAATCCAGAATTATATTGGACAAGTGTAATGTTGCATTAACAAATTGGACTT
TTTCTATAGTTATAAGTTCATTATCTGTAGGTTTATTATCATTAATTGTTTTATCAATCTTAGATGTTAAATATGTAGTA
TCAAATGCAATTATTGCTATGACCTTAAACATAATTCCTAACATCGGACCTGTTTTAAGTGGAATATTTCCAGTTTCAAT
AGCACTTTTAGACAATTTTTGGAAACCAGTAGCTGTTTTTGGTGCCTACATAATCATTCAGAATATAGAAAGTTATGTCA
TCATGCCTTTTATTTTGAAGAAAAAAACAAATTTACTTCCTGGGTTAACATTAATATCTCAATTTGGACTTACTTTCATC
TTTGGACCTTTAGGTTTAGTCTTATCTTTGCCAATTGCGGTTGTAACACAAGTTTTAATCAAAGAGATCATTAATGAAAA
TTAA

Upstream 100 bases:

>100_bases
AAACTAAATCTGATTTTGATAGATTCATGAGATTTGCGAATAGTTATGCCAAATCAAATGGTTTAGGATATTCTGAAAAG
AAGTAAGTAGATTGTAAAAG

Downstream 100 bases:

>100_bases
GTAATTTCAGTTGTTTAATTTCCTATATAAATATGGATAAGAAAAAAGAATAAAGAAAGAGAGAGGATGTTTAGATAATG
AAAAAAATAAAGAATTAAAG

Product: permease

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MSSSFYFKFAVVIISFLIVWTLRDFLLLIICSLVISNVVSNLCNQIQSILKLPRFFSLLIVIFGISFIIFIISILVLPPF
VREFNEILIDIPNGLSKINVLINSNLNKFNDLLYGEESENVVDIFSLVNDVVPIPDGATIAKAIQESFVNIINLAGNLGT
GLIRIIFVLVVSFMISIEPKAYKEGVLLIVPKVYRNKSRIILDKCNVALTNWTFSIVISSLSVGLLSLIVLSILDVKYVV
SNAIIAMTLNIIPNIGPVLSGIFPVSIALLDNFWKPVAVFGAYIIIQNIESYVIMPFILKKKTNLLPGLTLISQFGLTFI
FGPLGLVLSLPIAVVTQVLIKEIINEN

Sequences:

>Translated_347_residues
MSSSFYFKFAVVIISFLIVWTLRDFLLLIICSLVISNVVSNLCNQIQSILKLPRFFSLLIVIFGISFIIFIISILVLPPF
VREFNEILIDIPNGLSKINVLINSNLNKFNDLLYGEESENVVDIFSLVNDVVPIPDGATIAKAIQESFVNIINLAGNLGT
GLIRIIFVLVVSFMISIEPKAYKEGVLLIVPKVYRNKSRIILDKCNVALTNWTFSIVISSLSVGLLSLIVLSILDVKYVV
SNAIIAMTLNIIPNIGPVLSGIFPVSIALLDNFWKPVAVFGAYIIIQNIESYVIMPFILKKKTNLLPGLTLISQFGLTFI
FGPLGLVLSLPIAVVTQVLIKEIINEN
>Mature_346_residues
SSSFYFKFAVVIISFLIVWTLRDFLLLIICSLVISNVVSNLCNQIQSILKLPRFFSLLIVIFGISFIIFIISILVLPPFV
REFNEILIDIPNGLSKINVLINSNLNKFNDLLYGEESENVVDIFSLVNDVVPIPDGATIAKAIQESFVNIINLAGNLGTG
LIRIIFVLVVSFMISIEPKAYKEGVLLIVPKVYRNKSRIILDKCNVALTNWTFSIVISSLSVGLLSLIVLSILDVKYVVS
NAIIAMTLNIIPNIGPVLSGIFPVSIALLDNFWKPVAVFGAYIIIQNIESYVIMPFILKKKTNLLPGLTLISQFGLTFIF
GPLGLVLSLPIAVVTQVLIKEIINEN

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38389; Mature: 38258

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSFYFKFAVVIISFLIVWTLRDFLLLIICSLVISNVVSNLCNQIQSILKLPRFFSLLI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIFGISFIIFIISILVLPPFVREFNEILIDIPNGLSKINVLINSNLNKFNDLLYGEESEN
HHHHHHHHHHHHHHHHHCHHHHHHHHHHEECCCCHHHHHHHHCCCCHHHHHHHCCCCCCH
VVDIFSLVNDVVPIPDGATIAKAIQESFVNIINLAGNLGTGLIRIIFVLVVSFMISIEPK
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCH
AYKEGVLLIVPKVYRNKSRIILDKCNVALTNWTFSIVISSLSVGLLSLIVLSILDVKYVV
HHHCCEEEEECHHHCCCCCEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNAIIAMTLNIIPNIGPVLSGIFPVSIALLDNFWKPVAVFGAYIIIQNIESYVIMPFILK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KKTNLLPGLTLISQFGLTFIFGPLGLVLSLPIAVVTQVLIKEIINEN
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSSFYFKFAVVIISFLIVWTLRDFLLLIICSLVISNVVSNLCNQIQSILKLPRFFSLLI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIFGISFIIFIISILVLPPFVREFNEILIDIPNGLSKINVLINSNLNKFNDLLYGEESEN
HHHHHHHHHHHHHHHHHCHHHHHHHHHHEECCCCHHHHHHHHCCCCHHHHHHHCCCCCCH
VVDIFSLVNDVVPIPDGATIAKAIQESFVNIINLAGNLGTGLIRIIFVLVVSFMISIEPK
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCH
AYKEGVLLIVPKVYRNKSRIILDKCNVALTNWTFSIVISSLSVGLLSLIVLSILDVKYVV
HHHCCEEEEECHHHCCCCCEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNAIIAMTLNIIPNIGPVLSGIFPVSIALLDNFWKPVAVFGAYIIIQNIESYVIMPFILK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KKTNLLPGLTLISQFGLTFIFGPLGLVLSLPIAVVTQVLIKEIINEN
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA