Click here to switch to the map view.

The map label for this gene is 123966240

Identifier: 123966240

GI number: 123966240

Start: 900962

End: 901696

Strand: Reverse

Name: 123966240

Synonym: P9515_10071

Alternate gene names: NA

Gene position: 901696-900962 (Counterclockwise)

Preceding gene: 123966244

Following gene: 123966239

Centisome position: 52.91

GC content: 29.8

Gene sequence:

>735_bases
ATGAGTTTATTAGAAATGAAAAACAAAGATCAAGATTACCATTATAAGAGTACATTAGCTTTAGTTAAAAAATTTGTTGA
ATCTAATCAACGAAAAAGACTAAAATTATTATCAGAAATTGAATCAGAAGTTGATAATTTATTTGTGTTTGGTACAAAAA
TATTTGATGATTTTGATCAAGAAGGTGATGATTGGGCAGCTGGTTGGTTATTACAAGTATTAAAAAAACATAAACCACTT
TTTTTTAAAGATAAAAAATACAATAATTGGTTTGTTACCTATTCAGATAAAAATATTAATTATGAAGAACTCCAGTTGAA
ATTATTAGAACAAAATTTTGAGGAGGCTGATAGATTAACAAGTTCATATTTAAGACAACTTGCTGGAAAGCTCGCTGTAA
ATCGTGGATATGTTTTTTATAGTGAGGTTAATAGTATGTCTGGCACTGATCTTCAAACTATAGATAGATTATGGAGTATT
TATTCAAATGGTAGGTTTGGTTTCTCAATACAGGCAAAAATTCTGAAGTCAGTTGAAAAAAAATATGAATTGTTATGGCC
AAAGATAGGGTGGAAAAAAGATGGATATTGGACTAGATATCCAGGTTCGTTTAGCTGGTCTTTAGATGCACCTGATGGAC
ACATGCCATTAATAAATCAACTAAGAGGCGTTAGACTTATGGACTCGATACTAAGGCATCCAGCAATTTCTTTGAGGCAT
AATAATATTCTTTGA

Upstream 100 bases:

>100_bases
AATATTCTCCGGGACTTCTAACATCGATAAGTGGTCCGTTACGCTTCCTAAATTTCTCTAGTTCTTCTCTTTTGGAGTAC
ATAGATGGTTTAAATATTAG

Downstream 100 bases:

>100_bases
TCTTGAGCTCTTTGATAAGTTAATATGTGATTAATATAGTCACAAAGTTATGTCCTTTTTTCAGGGCAAAATTCTTTTGA
ATTTTATTACAAACTTACTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MSLLEMKNKDQDYHYKSTLALVKKFVESNQRKRLKLLSEIESEVDNLFVFGTKIFDDFDQEGDDWAAGWLLQVLKKHKPL
FFKDKKYNNWFVTYSDKNINYEELQLKLLEQNFEEADRLTSSYLRQLAGKLAVNRGYVFYSEVNSMSGTDLQTIDRLWSI
YSNGRFGFSIQAKILKSVEKKYELLWPKIGWKKDGYWTRYPGSFSWSLDAPDGHMPLINQLRGVRLMDSILRHPAISLRH
NNIL

Sequences:

>Translated_244_residues
MSLLEMKNKDQDYHYKSTLALVKKFVESNQRKRLKLLSEIESEVDNLFVFGTKIFDDFDQEGDDWAAGWLLQVLKKHKPL
FFKDKKYNNWFVTYSDKNINYEELQLKLLEQNFEEADRLTSSYLRQLAGKLAVNRGYVFYSEVNSMSGTDLQTIDRLWSI
YSNGRFGFSIQAKILKSVEKKYELLWPKIGWKKDGYWTRYPGSFSWSLDAPDGHMPLINQLRGVRLMDSILRHPAISLRH
NNIL
>Mature_243_residues
SLLEMKNKDQDYHYKSTLALVKKFVESNQRKRLKLLSEIESEVDNLFVFGTKIFDDFDQEGDDWAAGWLLQVLKKHKPLF
FKDKKYNNWFVTYSDKNINYEELQLKLLEQNFEEADRLTSSYLRQLAGKLAVNRGYVFYSEVNSMSGTDLQTIDRLWSIY
SNGRFGFSIQAKILKSVEKKYELLWPKIGWKKDGYWTRYPGSFSWSLDAPDGHMPLINQLRGVRLMDSILRHPAISLRHN
NIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ycf53 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016024
- InterPro:   IPR008629 [H]

Pfam domain/function: PF05419 GUN4 [H]

EC number: NA

Molecular weight: Translated: 28797; Mature: 28666

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLEMKNKDQDYHYKSTLALVKKFVESNQRKRLKLLSEIESEVDNLFVFGTKIFDDFDQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEHHHHHHHHCC
EGDDWAAGWLLQVLKKHKPLFFKDKKYNNWFVTYSDKNINYEELQLKLLEQNFEEADRLT
CCCHHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
SSYLRQLAGKLAVNRGYVFYSEVNSMSGTDLQTIDRLWSIYSNGRFGFSIQAKILKSVEK
HHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHH
KYELLWPKIGWKKDGYWTRYPGSFSWSLDAPDGHMPLINQLRGVRLMDSILRHPAISLRH
HHHHHCCCCCCCCCCCEEECCCCEEEEECCCCCCCHHHHHHCCHHHHHHHHHCCCEECCC
NNIL
CCCC
>Mature Secondary Structure 
SLLEMKNKDQDYHYKSTLALVKKFVESNQRKRLKLLSEIESEVDNLFVFGTKIFDDFDQ
CCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEHHHHHHHHCC
EGDDWAAGWLLQVLKKHKPLFFKDKKYNNWFVTYSDKNINYEELQLKLLEQNFEEADRLT
CCCHHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
SSYLRQLAGKLAVNRGYVFYSEVNSMSGTDLQTIDRLWSIYSNGRFGFSIQAKILKSVEK
HHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHH
KYELLWPKIGWKKDGYWTRYPGSFSWSLDAPDGHMPLINQLRGVRLMDSILRHPAISLRH
HHHHHCCCCCCCCCCCEEECCCCEEEEECCCCCCCHHHHHHCCHHHHHHHHHCCCEECCC
NNIL
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]