Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is rsbW

Identifier: 123966239

GI number: 123966239

Start: 900469

End: 900912

Strand: Reverse

Name: rsbW

Synonym: P9515_10061

Alternate gene names: NA

Gene position: 900912-900469 (Counterclockwise)

Preceding gene: 123966240

Following gene: 123966235

Centisome position: 52.86

GC content: 31.76

Gene sequence:

>444_bases
ATGTCCTTTTTTCAGGGCAAAATTCTTTTGAATTTTATTACAAACTTACTATATAGGCCAACAATTAACTGGTCTAATTT
TGAATTAGACTCATCAATACAACTAAATGATTTTGTCGATTTATTGTTAGAACCCTTAAAGACTTCGCAATATTCATATC
GAACAAGACTTGGTTTGCATGAAGCTCTTATAAATGCTGTTACCCATGGCAATAAATTAGATCCTAAAAAATCAATCAGA
GTTCGAAGAATTATTACTCCTAACTGGTGCGTTTGGCAGATTCAAGATCAAGGTAATGGGTTAGAAATAAAAAAAAGAAT
TTATAAATTGCCTGAAAAACTTAGTGCGTTGAATGGGCGTGGTCTATATATCATAAACGAATGTTTTGATGATATTAGAT
GGAGTAATAAAGGTAACCGACTCCAATTGGCATTAAAGAGATGA

Upstream 100 bases:

>100_bases
TCGATACTAAGGCATCCAGCAATTTCTTTGAGGCATAATAATATTCTTTGATCTTGAGCTCTTTGATAAGTTAATATGTG
ATTAATATAGTCACAAAGTT

Downstream 100 bases:

>100_bases
GTTTTTACTTGGACAGGGTTTATCTATATTAATTCCTTTAAGCCATTTTATACTTTCTTCCAAATAATTTATGGTATCTT
TTTCATTCTCTGAAATTAGT

Product: anti-sigma regulatory factor (Ser/Thr protein kinase)

Products: NA

Alternate protein names: PmgA Protein; Photomixotrophic Growth Related Protein PmgA-Like Protein; Photomixotrophic Growth-Like Protein PmgA; Photomixotrophic Growth Related Protein

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSFFQGKILLNFITNLLYRPTINWSNFELDSSIQLNDFVDLLLEPLKTSQYSYRTRLGLHEALINAVTHGNKLDPKKSIR
VRRIITPNWCVWQIQDQGNGLEIKKRIYKLPEKLSALNGRGLYIINECFDDIRWSNKGNRLQLALKR

Sequences:

>Translated_147_residues
MSFFQGKILLNFITNLLYRPTINWSNFELDSSIQLNDFVDLLLEPLKTSQYSYRTRLGLHEALINAVTHGNKLDPKKSIR
VRRIITPNWCVWQIQDQGNGLEIKKRIYKLPEKLSALNGRGLYIINECFDDIRWSNKGNRLQLALKR
>Mature_146_residues
SFFQGKILLNFITNLLYRPTINWSNFELDSSIQLNDFVDLLLEPLKTSQYSYRTRLGLHEALINAVTHGNKLDPKKSIRV
RRIITPNWCVWQIQDQGNGLEIKKRIYKLPEKLSALNGRGLYIINECFDDIRWSNKGNRLQLALKR

Specific function: Unknown

COG id: COG2172

COG function: function code T; Anti-sigma regulatory factor (Ser/Thr protein kinase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17249; Mature: 17118

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFFQGKILLNFITNLLYRPTINWSNFELDSSIQLNDFVDLLLEPLKTSQYSYRTRLGLH
CCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
EALINAVTHGNKLDPKKSIRVRRIITPNWCVWQIQDQGNGLEIKKRIYKLPEKLSALNGR
HHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCC
GLYIINECFDDIRWSNKGNRLQLALKR
CEEEHHHHHHHHHCCCCCCEEEEEEEC
>Mature Secondary Structure 
SFFQGKILLNFITNLLYRPTINWSNFELDSSIQLNDFVDLLLEPLKTSQYSYRTRLGLH
CCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
EALINAVTHGNKLDPKKSIRVRRIITPNWCVWQIQDQGNGLEIKKRIYKLPEKLSALNGR
HHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCC
GLYIINECFDDIRWSNKGNRLQLALKR
CEEEHHHHHHHHHCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA