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The map label for this gene is secF [H]

Identifier: 123966244

GI number: 123966244

Start: 904441

End: 905358

Strand: Reverse

Name: secF [H]

Synonym: P9515_10111

Alternate gene names: 123966244

Gene position: 905358-904441 (Counterclockwise)

Preceding gene: 123966245

Following gene: 123966240

Centisome position: 53.13

GC content: 25.27

Gene sequence:

>918_bases
ATGGCTTCATTTAATTTTAACTTAATTAAAAATAAAAATAATATATTTGGATTTTCATCTTTTCTTATATTGTTAAGTTT
AATAGGAATTATATATTCAACTTTTAATACTTCATTTAAAAAACCTATTAATCTTGGAATGGATTTTATTGGCGGTAATG
AATTAAGAATTGAAAGGATTTGTGAAAAAGAATGTAAAAATATCTCACCAGATTTAGTTATTGAAAAACTTAAAAAATTT
TCTAATAATAAAAAACTCTTAAATAATATTAAATTACAAATTCAAAATAATAATAGTTTAATTTCGATTCGGACTCCTTA
TTTAACAATAGAGGAATCAAATTATTTAATTTCTAATGTTGATGAAGTTTTAGGTCCTTTAAATTATGAAAGTAAAAACT
CGAGAATTATAGGTCCAAAACTAGGTAAAAAACTACTTATCAATTGTGCAACCTCCTTATTAGTTTCTTTATTTGCAATA
TCTTTATATATCTCTATTCGATTTGATAAGAAATATGCATTGTTTGCTTTATTAGCTTTATTCCATGATTTATTTATTGT
TTTTGGCATTTTTTCTTGGTTAGGTGTACTTGTCTCAATTGAGGTAAATAGTCTGTTTGCAGTTTCTTTATTAACAATAG
CTGGCTATTCTGTTAATGATACGGTTGTCATTTTTGATAGGATTAGGGAAAATTTAAAACAAAACCCAGAGGATTTTAAC
AACACAATCCAAATTTCTGTTAATGAATCTTTTCGAAGAACACTCTTCACTAGCATTACAACATTAATACCACTACTAAC
ACTTATGATTTTTGGTTCATATTCACTCTTTTGGTTTTCTGTATCCTTGTCACTGGGAATTCTAATTGGGAGTTATTCAA
GTATCCTATTAGCACCTTCTTTTCTAATTAAAGATTAA

Upstream 100 bases:

>100_bases
AATTTTAAGATTTTTGACTACTTATCAATCTTTAAGACAAAAAAATCTGTATTTAAATAGGTCTAATCCCCTCTAATTTA
AATTATTAATTATTTAGTTC

Downstream 100 bases:

>100_bases
ATGAAAGTTTCAAATTAATGAAAATAAATTACTATTTAATTTTATTATTCTCGTTGGTTTTAATAGATCTATCTACAGAA
TTAAAAATTCTAAGTGATCA

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MASFNFNLIKNKNNIFGFSSFLILLSLIGIIYSTFNTSFKKPINLGMDFIGGNELRIERICEKECKNISPDLVIEKLKKF
SNNKKLLNNIKLQIQNNNSLISIRTPYLTIEESNYLISNVDEVLGPLNYESKNSRIIGPKLGKKLLINCATSLLVSLFAI
SLYISIRFDKKYALFALLALFHDLFIVFGIFSWLGVLVSIEVNSLFAVSLLTIAGYSVNDTVVIFDRIRENLKQNPEDFN
NTIQISVNESFRRTLFTSITTLIPLLTLMIFGSYSLFWFSVSLSLGILIGSYSSILLAPSFLIKD

Sequences:

>Translated_305_residues
MASFNFNLIKNKNNIFGFSSFLILLSLIGIIYSTFNTSFKKPINLGMDFIGGNELRIERICEKECKNISPDLVIEKLKKF
SNNKKLLNNIKLQIQNNNSLISIRTPYLTIEESNYLISNVDEVLGPLNYESKNSRIIGPKLGKKLLINCATSLLVSLFAI
SLYISIRFDKKYALFALLALFHDLFIVFGIFSWLGVLVSIEVNSLFAVSLLTIAGYSVNDTVVIFDRIRENLKQNPEDFN
NTIQISVNESFRRTLFTSITTLIPLLTLMIFGSYSLFWFSVSLSLGILIGSYSSILLAPSFLIKD
>Mature_304_residues
ASFNFNLIKNKNNIFGFSSFLILLSLIGIIYSTFNTSFKKPINLGMDFIGGNELRIERICEKECKNISPDLVIEKLKKFS
NNKKLLNNIKLQIQNNNSLISIRTPYLTIEESNYLISNVDEVLGPLNYESKNSRIIGPKLGKKLLINCATSLLVSLFAIS
LYISIRFDKKYALFALLALFHDLFIVFGIFSWLGVLVSIEVNSLFAVSLLTIAGYSVNDTVVIFDRIRENLKQNPEDFNN
TIQISVNESFRRTLFTSITTLIPLLTLMIFGSYSLFWFSVSLSLGILIGSYSSILLAPSFLIKD

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=302, Percent_Identity=31.1258278145695, Blast_Score=124, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 34467; Mature: 34336

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASFNFNLIKNKNNIFGFSSFLILLSLIGIIYSTFNTSFKKPINLGMDFIGGNELRIERI
CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCHHHHHHH
CEKECKNISPDLVIEKLKKFSNNKKLLNNIKLQIQNNNSLISIRTPYLTIEESNYLISNV
HHHHHCCCCHHHHHHHHHHHCCCHHHHEEEEEEEECCCCEEEEECCEEEEECCCCHHHHH
DEVLGPLNYESKNSRIIGPKLGKKLLINCATSLLVSLFAISLYISIRFDKKYALFALLAL
HHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHH
FHDLFIVFGIFSWLGVLVSIEVNSLFAVSLLTIAGYSVNDTVVIFDRIRENLKQNPEDFN
HHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCCCCC
NTIQISVNESFRRTLFTSITTLIPLLTLMIFGSYSLFWFSVSLSLGILIGSYSSILLAPS
CEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHCCH
FLIKD
HHCCC
>Mature Secondary Structure 
ASFNFNLIKNKNNIFGFSSFLILLSLIGIIYSTFNTSFKKPINLGMDFIGGNELRIERI
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCHHHHHHH
CEKECKNISPDLVIEKLKKFSNNKKLLNNIKLQIQNNNSLISIRTPYLTIEESNYLISNV
HHHHHCCCCHHHHHHHHHHHCCCHHHHEEEEEEEECCCCEEEEECCEEEEECCCCHHHHH
DEVLGPLNYESKNSRIIGPKLGKKLLINCATSLLVSLFAISLYISIRFDKKYALFALLAL
HHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHH
FHDLFIVFGIFSWLGVLVSIEVNSLFAVSLLTIAGYSVNDTVVIFDRIRENLKQNPEDFN
HHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCCCCC
NTIQISVNESFRRTLFTSITTLIPLLTLMIFGSYSLFWFSVSLSLGILIGSYSSILLAPS
CEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHCCH
FLIKD
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]