| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966035
Identifier: 123966035
GI number: 123966035
Start: 722197
End: 723264
Strand: Direct
Name: 123966035
Synonym: P9515_08001
Alternate gene names: NA
Gene position: 722197-723264 (Clockwise)
Preceding gene: 123966034
Following gene: 123966036
Centisome position: 42.38
GC content: 38.39
Gene sequence:
>1068_bases ATGGCATTAAATTACTACAAAAATGAGCTTAAAGAAAATGCTCAACTTTTAGCTTCCAAAGGTAAAGGGATATTAGCTGT AGATGAATCAACTAAGACAGTAGGTAAAAGATTGGCTGGTATAGGGGTAGAAAATACAGAAGAAAATAGAAAGGCATACA GAGGAATGCTTTTCACCACTGAAGGTCTTGGCAAGTACATAAGTGGTGCAATTTTATTTGAGGAGACACTTTTCCAGAAC CATCAAGATGGTGAATCAATGGTTAAAAAGCTAAATGACTTGGGAATAATTCCAGGTATAAAGGTTGATAAAGGTTTAAA CCCTCTTCCAGGAGGAGGAGATGTAGAAACTTTTTGTTCTGGTTTAGATGGATTAGTAGAAAGAGCGGCGAAATACTACG AACAAGGCGCAAGATTTGCAAAATGGAGAGCAGTTCTACAAATAACTGAAGATGGTTGTCCTTCAAAATTATCGATACAA GAAAATGCATGGGGATTAGCCAGATATGCTAGGTCAGTCCAGGAATCAGGATTAGTTCCAATAATTGAACCAGAAATTTT AATGGATGGTAATCACACTATTGAGAAAACTGCTGAAGTTCAAGAAGAAGTTATTAAGCAGGTATATATTGCTTGTCAGG CAAATGGAGTTTTCCTTGAGGGAACACTCTTAAAACCTTCGATGACTGTTAATGGAGCTGAGTGCCCGACAAAAGCTGAT CCTATGAAAGTTGCTGAAATGACAATAAGAACAATGGAAAGATGCGTACCGGCATCAGTTCCTGGAATTGTATTCTTGTC CGGAGGGTTAAGTGAGGAAGCTGCTTCAGTTTATTTAAACAACATGAATACTCTTTATAGAAAAGCTTTATGGAATGTTT CGTTCTCTTATGGACGTGCTTTACAGCATTCTTGCTTAAAAGCATGGAAAGGTAGCGAAATAGAGGCTGGGCAAAAGGCT TTAATTGCAAGAGCTCAGGCAAACTCTGAAGCCTCAACGGGTTCATATGTTGCAGGATCTCAGCCATCATCTGATGAGCA ATTGTTTGTAGCAGGCTACACATATTAA
Upstream 100 bases:
>100_bases TAACATTAGTAAGTAACAATTATTACTCGAATAGGTATTGAATTGATTTTATTTTTTCTTCATATTCTGGAAAAATCAAC TGAACCTAAATTTTTAAAGA
Downstream 100 bases:
>100_bases AAAGCAGAAAATATACACTTAGACATCTAAATAGTTTCATTAATATTGCACTTAATTTAATTATTAACGTGACATTTGAT ACCTTCGTATATTAAACTCT
Product: fructose-1,6-bisphosphate aldolase
Products: NA
Alternate protein names: Fructose-biphosphate aldolase class I; FBP aldolase [H]
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MALNYYKNELKENAQLLASKGKGILAVDESTKTVGKRLAGIGVENTEENRKAYRGMLFTTEGLGKYISGAILFEETLFQN HQDGESMVKKLNDLGIIPGIKVDKGLNPLPGGGDVETFCSGLDGLVERAAKYYEQGARFAKWRAVLQITEDGCPSKLSIQ ENAWGLARYARSVQESGLVPIIEPEILMDGNHTIEKTAEVQEEVIKQVYIACQANGVFLEGTLLKPSMTVNGAECPTKAD PMKVAEMTIRTMERCVPASVPGIVFLSGGLSEEAASVYLNNMNTLYRKALWNVSFSYGRALQHSCLKAWKGSEIEAGQKA LIARAQANSEASTGSYVAGSQPSSDEQLFVAGYTY
Sequences:
>Translated_355_residues MALNYYKNELKENAQLLASKGKGILAVDESTKTVGKRLAGIGVENTEENRKAYRGMLFTTEGLGKYISGAILFEETLFQN HQDGESMVKKLNDLGIIPGIKVDKGLNPLPGGGDVETFCSGLDGLVERAAKYYEQGARFAKWRAVLQITEDGCPSKLSIQ ENAWGLARYARSVQESGLVPIIEPEILMDGNHTIEKTAEVQEEVIKQVYIACQANGVFLEGTLLKPSMTVNGAECPTKAD PMKVAEMTIRTMERCVPASVPGIVFLSGGLSEEAASVYLNNMNTLYRKALWNVSFSYGRALQHSCLKAWKGSEIEAGQKA LIARAQANSEASTGSYVAGSQPSSDEQLFVAGYTY >Mature_354_residues ALNYYKNELKENAQLLASKGKGILAVDESTKTVGKRLAGIGVENTEENRKAYRGMLFTTEGLGKYISGAILFEETLFQNH QDGESMVKKLNDLGIIPGIKVDKGLNPLPGGGDVETFCSGLDGLVERAAKYYEQGARFAKWRAVLQITEDGCPSKLSIQE NAWGLARYARSVQESGLVPIIEPEILMDGNHTIEKTAEVQEEVIKQVYIACQANGVFLEGTLLKPSMTVNGAECPTKADP MKVAEMTIRTMERCVPASVPGIVFLSGGLSEEAASVYLNNMNTLYRKALWNVSFSYGRALQHSCLKAWKGSEIEAGQKAL IARAQANSEASTGSYVAGSQPSSDEQLFVAGYTY
Specific function: Unknown
COG id: COG3588
COG function: function code G; Fructose-1,6-bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class I fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Homo sapiens, GI40354205, Length=354, Percent_Identity=50.2824858757062, Blast_Score=324, Evalue=7e-89, Organism=Homo sapiens, GI4885063, Length=354, Percent_Identity=48.0225988700565, Blast_Score=311, Evalue=5e-85, Organism=Homo sapiens, GI34577112, Length=354, Percent_Identity=47.7401129943503, Blast_Score=302, Evalue=4e-82, Organism=Homo sapiens, GI34577110, Length=354, Percent_Identity=47.7401129943503, Blast_Score=302, Evalue=4e-82, Organism=Homo sapiens, GI4557305, Length=354, Percent_Identity=47.7401129943503, Blast_Score=302, Evalue=4e-82, Organism=Homo sapiens, GI193794814, Length=354, Percent_Identity=47.7401129943503, Blast_Score=302, Evalue=4e-82, Organism=Caenorhabditis elegans, GI25150450, Length=358, Percent_Identity=47.7653631284916, Blast_Score=306, Evalue=8e-84, Organism=Caenorhabditis elegans, GI71983985, Length=352, Percent_Identity=48.0113636363636, Blast_Score=298, Evalue=4e-81, Organism=Caenorhabditis elegans, GI71983990, Length=233, Percent_Identity=49.7854077253219, Blast_Score=209, Evalue=2e-54, Organism=Drosophila melanogaster, GI45553577, Length=354, Percent_Identity=50.2824858757062, Blast_Score=315, Evalue=4e-86, Organism=Drosophila melanogaster, GI24650282, Length=352, Percent_Identity=50, Blast_Score=311, Evalue=6e-85, Organism=Drosophila melanogaster, GI24650280, Length=352, Percent_Identity=50, Blast_Score=311, Evalue=6e-85, Organism=Drosophila melanogaster, GI24650278, Length=352, Percent_Identity=50, Blast_Score=311, Evalue=6e-85, Organism=Drosophila melanogaster, GI221459619, Length=337, Percent_Identity=50.7418397626113, Blast_Score=307, Evalue=6e-84, Organism=Drosophila melanogaster, GI24650288, Length=337, Percent_Identity=50.7418397626113, Blast_Score=307, Evalue=6e-84, Organism=Drosophila melanogaster, GI24650304, Length=348, Percent_Identity=45.4022988505747, Blast_Score=276, Evalue=2e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000741 - InterPro: IPR013785 [H]
Pfam domain/function: PF00274 Glycolytic [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 38558; Mature: 38427
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: PS00158 ALDOLASE_CLASS_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALNYYKNELKENAQLLASKGKGILAVDESTKTVGKRLAGIGVENTEENRKAYRGMLFTT CCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHCEEEEE EGLGKYISGAILFEETLFQNHQDGESMVKKLNDLGIIPGIKVDKGLNPLPGGGDVETFCS HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHH GLDGLVERAAKYYEQGARFAKWRAVLQITEDGCPSKLSIQENAWGLARYARSVQESGLVP HHHHHHHHHHHHHHHCCHHHHHHHHEEEECCCCCCCCEECCCHHHHHHHHHHHHHCCCCE IIEPEILMDGNHTIEKTAEVQEEVIKQVYIACQANGVFLEGTLLKPSMTVNGAECPTKAD EECCCEEECCCCCHHHHHHHHHHHHHHHHHHEECCCEEEEEEEECCCCCCCCCCCCCCCC PMKVAEMTIRTMERCVPASVPGIVFLSGGLSEEAASVYLNNMNTLYRKALWNVSFSYGRA CHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LQHSCLKAWKGSEIEAGQKALIARAQANSEASTGSYVAGSQPSSDEQLFVAGYTY HHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCEEEEEEECC >Mature Secondary Structure ALNYYKNELKENAQLLASKGKGILAVDESTKTVGKRLAGIGVENTEENRKAYRGMLFTT CCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHCEEEEE EGLGKYISGAILFEETLFQNHQDGESMVKKLNDLGIIPGIKVDKGLNPLPGGGDVETFCS HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHH GLDGLVERAAKYYEQGARFAKWRAVLQITEDGCPSKLSIQENAWGLARYARSVQESGLVP HHHHHHHHHHHHHHHCCHHHHHHHHEEEECCCCCCCCEECCCHHHHHHHHHHHHHCCCCE IIEPEILMDGNHTIEKTAEVQEEVIKQVYIACQANGVFLEGTLLKPSMTVNGAECPTKAD EECCCEEECCCCCHHHHHHHHHHHHHHHHHHEECCCEEEEEEEECCCCCCCCCCCCCCCC PMKVAEMTIRTMERCVPASVPGIVFLSGGLSEEAASVYLNNMNTLYRKALWNVSFSYGRA CHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LQHSCLKAWKGSEIEAGQKALIARAQANSEASTGSYVAGSQPSSDEQLFVAGYTY HHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]