| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is cbbA [H]
Identifier: 123966036
GI number: 123966036
Start: 723412
End: 724485
Strand: Direct
Name: cbbA [H]
Synonym: P9515_08011
Alternate gene names: 123966036
Gene position: 723412-724485 (Clockwise)
Preceding gene: 123966035
Following gene: 123966042
Centisome position: 42.45
GC content: 39.29
Gene sequence:
>1074_bases ATGGCCCTTGTTCCACTGAGATTACTTTTAGATCACGCTGCCGAGAATGGTTACGGTATACCAGCTTTTAACGTTAACAA TCTTGAACAAGTTCAAGCGATTATGGAGGCTGCTTATGAAACTGATAGTCCTGTCATTCTTCAAGCCTCAAGAGGAGCGA GAAATTATGCTGGAGAAATTTTCCTTCGTCACCTAATCCTTGCCGCAACCGAAACTTATCCTAATATTCCAGTCGTAATG CATCAGGATCATGGAAATGAGCCATCAACTTGTTATTCAGCTGCAATAAATGGTTTCACATCAGTAATGATGGATGGTTC TCTTGAGGCAGATGCAAAAACACCTGCAAGTTACGAGTATAATGTGGCAGTAACAAAAAAAGTAGTCGACTTTGCTCACT CTGTTGGAGTGAGTGTTGAGGGAGAACTAGGATGTTTAGGTTCATTAGAAACTGGAAAAGGCGAAGCTGAAGATGGACAT GGATTTGAAGGTGAGCTTTCAACAGATATGCTTTTAACTGATCCGGAAGAAGCCGCAGATTTTGTAACTAAAACGAATGT TGATGCTTTAGCTATCGCTATAGGAACAAGTCATGGAGCATATAAATTCACAAGAAAGCCAACAGGAGAGGTTCTTGCAA TAAGTAGGATTTCTGAAATCCATAACGCTATTCCAAATACTCATCTTGTAATGCATGGATCTAGTTCAGTACCACAGGAA TGGTTAGATATCATAAATAAATACGGGGGAGAGATTCCGCAAACATATGGCGTGCCTGTTGAAGAAATTCAAGAAGGTAT CAGAAATGGAGTAAGGAAAGTTAATATCGATACTGATAATAGACTTGCCTTTACAGCAGCAGTTAGAGAAGCGGCTTTTT CAGACACAGCAAACTTCGATCCAAGACATTTCAATAAACCTGCCAGAAATTATATGAAGCAAGTTTGTCTTGATAGATAC AGACAATTCTGGTGTGAAGGTCAAGCAGGTAGGATCAAGCAAAGCAGTACAAATTATTATGCTGATCTTTATGCAAAAGG TAACTTAGGTTCAAAGGTAAAAGCAAAAGTTTAG
Upstream 100 bases:
>100_bases GCACTTAATTTAATTATTAACGTGACATTTGATACCTTCGTATATTAAACTCTCGGAACATATTGCTTATTTATTTTAAG CATTTAATTAAATTTTAATT
Downstream 100 bases:
>100_bases TTCAATAAGTTATTCCCAAATAAAAAAGACCTTCAATATATGAAGGTCTTTTTTTTTATTAATTAAATCATTAATGACTT CAAAGTATATAGTCCATCTG
Product: fructose-1,6-bisphosphate aldolase
Products: NA
Alternate protein names: FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase; Fructose-bisphosphate aldolase class II [H]
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MALVPLRLLLDHAAENGYGIPAFNVNNLEQVQAIMEAAYETDSPVILQASRGARNYAGEIFLRHLILAATETYPNIPVVM HQDHGNEPSTCYSAAINGFTSVMMDGSLEADAKTPASYEYNVAVTKKVVDFAHSVGVSVEGELGCLGSLETGKGEAEDGH GFEGELSTDMLLTDPEEAADFVTKTNVDALAIAIGTSHGAYKFTRKPTGEVLAISRISEIHNAIPNTHLVMHGSSSVPQE WLDIINKYGGEIPQTYGVPVEEIQEGIRNGVRKVNIDTDNRLAFTAAVREAAFSDTANFDPRHFNKPARNYMKQVCLDRY RQFWCEGQAGRIKQSSTNYYADLYAKGNLGSKVKAKV
Sequences:
>Translated_357_residues MALVPLRLLLDHAAENGYGIPAFNVNNLEQVQAIMEAAYETDSPVILQASRGARNYAGEIFLRHLILAATETYPNIPVVM HQDHGNEPSTCYSAAINGFTSVMMDGSLEADAKTPASYEYNVAVTKKVVDFAHSVGVSVEGELGCLGSLETGKGEAEDGH GFEGELSTDMLLTDPEEAADFVTKTNVDALAIAIGTSHGAYKFTRKPTGEVLAISRISEIHNAIPNTHLVMHGSSSVPQE WLDIINKYGGEIPQTYGVPVEEIQEGIRNGVRKVNIDTDNRLAFTAAVREAAFSDTANFDPRHFNKPARNYMKQVCLDRY RQFWCEGQAGRIKQSSTNYYADLYAKGNLGSKVKAKV >Mature_356_residues ALVPLRLLLDHAAENGYGIPAFNVNNLEQVQAIMEAAYETDSPVILQASRGARNYAGEIFLRHLILAATETYPNIPVVMH QDHGNEPSTCYSAAINGFTSVMMDGSLEADAKTPASYEYNVAVTKKVVDFAHSVGVSVEGELGCLGSLETGKGEAEDGHG FEGELSTDMLLTDPEEAADFVTKTNVDALAIAIGTSHGAYKFTRKPTGEVLAISRISEIHNAIPNTHLVMHGSSSVPQEW LDIINKYGGEIPQTYGVPVEEIQEGIRNGVRKVNIDTDNRLAFTAAVREAAFSDTANFDPRHFNKPARNYMKQVCLDRYR QFWCEGQAGRIKQSSTNYYADLYAKGNLGSKVKAKV
Specific function: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3- phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis [H]
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1789526, Length=335, Percent_Identity=34.9253731343284, Blast_Score=161, Evalue=5e-41, Organism=Escherichia coli, GI87082041, Length=329, Percent_Identity=31.6109422492401, Blast_Score=148, Evalue=5e-37, Organism=Escherichia coli, GI1788072, Length=330, Percent_Identity=30.6060606060606, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1789293, Length=340, Percent_Identity=24.4117647058824, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6322790, Length=318, Percent_Identity=27.6729559748428, Blast_Score=71, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006412 - InterPro: IPR000771 [H]
Pfam domain/function: PF01116 F_bP_aldolase [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 38936; Mature: 38805
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00602 ALDOLASE_CLASS_II_1 ; PS00806 ALDOLASE_CLASS_II_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALVPLRLLLDHAAENGYGIPAFNVNNLEQVQAIMEAAYETDSPVILQASRGARNYAGEI CCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHH FLRHLILAATETYPNIPVVMHQDHGNEPSTCYSAAINGFTSVMMDGSLEADAKTPASYEY HHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE NVAVTKKVVDFAHSVGVSVEGELGCLGSLETGKGEAEDGHGFEGELSTDMLLTDPEEAAD EEHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHH FVTKTNVDALAIAIGTSHGAYKFTRKPTGEVLAISRISEIHNAIPNTHLVMHGSSSVPQE HHHHCCCCEEEEEEECCCCCEEECCCCCCCEEHHHHHHHHHHHCCCCEEEEECCCCCCHH WLDIINKYGGEIPQTYGVPVEEIQEGIRNGVRKVNIDTDNRLAFTAAVREAAFSDTANFD HHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCEEHHHHHHHHHHCCCCCCC PRHFNKPARNYMKQVCLDRYRQFWCEGQAGRIKQSSTNYYADLYAKGNLGSKVKAKV CHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCEEECC >Mature Secondary Structure ALVPLRLLLDHAAENGYGIPAFNVNNLEQVQAIMEAAYETDSPVILQASRGARNYAGEI CCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHH FLRHLILAATETYPNIPVVMHQDHGNEPSTCYSAAINGFTSVMMDGSLEADAKTPASYEY HHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE NVAVTKKVVDFAHSVGVSVEGELGCLGSLETGKGEAEDGHGFEGELSTDMLLTDPEEAAD EEHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHH FVTKTNVDALAIAIGTSHGAYKFTRKPTGEVLAISRISEIHNAIPNTHLVMHGSSSVPQE HHHHCCCCEEEEEEECCCCCEEECCCCCCCEEHHHHHHHHHHHCCCCEEEEECCCCCCHH WLDIINKYGGEIPQTYGVPVEEIQEGIRNGVRKVNIDTDNRLAFTAAVREAAFSDTANFD HHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCEEHHHHHHHHHHCCCCCCC PRHFNKPARNYMKQVCLDRYRQFWCEGQAGRIKQSSTNYYADLYAKGNLGSKVKAKV CHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231; 9298645 [H]