Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

Click here to switch to the map view.

The map label for this gene is yhhX [C]

Identifier: 123966034

GI number: 123966034

Start: 720989

End: 722092

Strand: Direct

Name: yhhX [C]

Synonym: P9515_07991

Alternate gene names: 123966034

Gene position: 720989-722092 (Clockwise)

Preceding gene: 123966033

Following gene: 123966035

Centisome position: 42.31

GC content: 33.61

Gene sequence:

>1104_bases
ATGAATTTTAGTAATGCTACTGACAAATTAAGAGTCGCAATTGCTGGTTTGGGATTTGGAAAAAAAATTCATTTGGAAGC
ATTAAAAGAATCAGATTATTTAATTCCAACTGCAATTTTTCACTACAAGAAAGAAAAAGGACCATCTTTAGAGAAGGAAA
CTGGGTTAAATTTTTATCATGATTGGGGAGAATTAGTTAAATCCAAAGATATAGACGGAATCATAATTGCTACATCTCCC
GAATCAAGATTTGAATTGGCAAAGGAAGCTCTTGAGAATAATAAACATCTTTTATTAGAGAAACCTGTAGCCTTAACCTC
CGAGGAAATTAAAGAACTTCAAAGAATATCATTAGTTAATAATTTGAGTGTTTGTGTAGATTTTGAATATAGAGCAGTAC
CACTTTTCCTACAAACCAAGAAAATGATAGATGAGAATATTTTAGGAAAAATATATTTAATTAAGCTTGATTGGTTGATG
GGTAGCCGGTCAGATCCCAATAGGGCTTGGAATTGGTATTCATTAAAAGAAAAAGGTGGTGGGGTTGTTGGAGCTTTAGG
TACTCATGCATTTGATATGTTGAACTGGTTTTTTGGAGAATCGATTGTAGTATCCGGGAAATTATCAACATCAATCAAGA
AAAGATCCTTACCTAATTCCTCTAAGTTTTTGAAAGTAACAAGTGAGGATATTTGCATAGCTAACCTTGAAATAAAAACT
TTCGATGACATCATAGTTCCATGTCAGGTTTCTTTATCCTCGATTTCAAAGTGTGGAAGAGGATTTAGTTTGGAAGTATA
TGGAAGTGAAGGCTCACTTTTCCTTAAGAGTGAGAATCAAAAAGATTATGTTCATGGTTTTAATTTAAAGATTTCAAATC
GAGAAGATAAGACATACAATTTATCCGCTGATCCACGCTATGATTTTGAAAAAACCTGGACTGATGGAAGAATTGCACCT
GTCCAGAGAATTCAAAGTTTATGGGCTCATAGTATCAAGAATCAAACTCCAGTAATCCCAGGACTGTCTGAGGGACTTAA
TAGTCAAAGAGTTTGTGAAGCTATAAGAAAATCTGCAGAGAGCGGTTTAAATGTAAGAATTTAG

Upstream 100 bases:

>100_bases
TTAATGGAATCCCACAGCTCAGTTCAAAGTGGCAAACATCAAATAATGATGAACTTATTGATGTTGTCATCGAAAAAAGC
TGTTCTGAGATCATAAATTA

Downstream 100 bases:

>100_bases
TTTTTAACATTAGTAAGTAACAATTATTACTCGAATAGGTATTGAATTGATTTTATTTTTTCTTCATATTCTGGAAAAAT
CAACTGAACCTAAATTTTTA

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MNFSNATDKLRVAIAGLGFGKKIHLEALKESDYLIPTAIFHYKKEKGPSLEKETGLNFYHDWGELVKSKDIDGIIIATSP
ESRFELAKEALENNKHLLLEKPVALTSEEIKELQRISLVNNLSVCVDFEYRAVPLFLQTKKMIDENILGKIYLIKLDWLM
GSRSDPNRAWNWYSLKEKGGGVVGALGTHAFDMLNWFFGESIVVSGKLSTSIKKRSLPNSSKFLKVTSEDICIANLEIKT
FDDIIVPCQVSLSSISKCGRGFSLEVYGSEGSLFLKSENQKDYVHGFNLKISNREDKTYNLSADPRYDFEKTWTDGRIAP
VQRIQSLWAHSIKNQTPVIPGLSEGLNSQRVCEAIRKSAESGLNVRI

Sequences:

>Translated_367_residues
MNFSNATDKLRVAIAGLGFGKKIHLEALKESDYLIPTAIFHYKKEKGPSLEKETGLNFYHDWGELVKSKDIDGIIIATSP
ESRFELAKEALENNKHLLLEKPVALTSEEIKELQRISLVNNLSVCVDFEYRAVPLFLQTKKMIDENILGKIYLIKLDWLM
GSRSDPNRAWNWYSLKEKGGGVVGALGTHAFDMLNWFFGESIVVSGKLSTSIKKRSLPNSSKFLKVTSEDICIANLEIKT
FDDIIVPCQVSLSSISKCGRGFSLEVYGSEGSLFLKSENQKDYVHGFNLKISNREDKTYNLSADPRYDFEKTWTDGRIAP
VQRIQSLWAHSIKNQTPVIPGLSEGLNSQRVCEAIRKSAESGLNVRI
>Mature_367_residues
MNFSNATDKLRVAIAGLGFGKKIHLEALKESDYLIPTAIFHYKKEKGPSLEKETGLNFYHDWGELVKSKDIDGIIIATSP
ESRFELAKEALENNKHLLLEKPVALTSEEIKELQRISLVNNLSVCVDFEYRAVPLFLQTKKMIDENILGKIYLIKLDWLM
GSRSDPNRAWNWYSLKEKGGGVVGALGTHAFDMLNWFFGESIVVSGKLSTSIKKRSLPNSSKFLKVTSEDICIANLEIKT
FDDIIVPCQVSLSSISKCGRGFSLEVYGSEGSLFLKSENQKDYVHGFNLKISNREDKTYNLSADPRYDFEKTWTDGRIAP
VQRIQSLWAHSIKNQTPVIPGLSEGLNSQRVCEAIRKSAESGLNVRI

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 41287; Mature: 41287

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFSNATDKLRVAIAGLGFGKKIHLEALKESDYLIPTAIFHYKKEKGPSLEKETGLNFYH
CCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHH
DWGELVKSKDIDGIIIATSPESRFELAKEALENNKHLLLEKPVALTSEEIKELQRISLVN
HHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHC
NLSVCVDFEYRAVPLFLQTKKMIDENILGKIYLIKLDWLMGSRSDPNRAWNWYSLKEKGG
CCEEEEEECCCEEEEEEHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCEEEECCCCC
GVVGALGTHAFDMLNWFFGESIVVSGKLSTSIKKRSLPNSSKFLKVTSEDICIANLEIKT
EEEEEHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCCCEEEEECCCEEEEEEEEEE
FDDIIVPCQVSLSSISKCGRGFSLEVYGSEGSLFLKSENQKDYVHGFNLKISNREDKTYN
CCCEEEEEEECHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCEEEEEEEECCCCCCEEE
LSADPRYDFEKTWTDGRIAPVQRIQSLWAHSIKNQTPVIPGLSEGLNSQRVCEAIRKSAE
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHH
SGLNVRI
CCCEECC
>Mature Secondary Structure
MNFSNATDKLRVAIAGLGFGKKIHLEALKESDYLIPTAIFHYKKEKGPSLEKETGLNFYH
CCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHH
DWGELVKSKDIDGIIIATSPESRFELAKEALENNKHLLLEKPVALTSEEIKELQRISLVN
HHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHC
NLSVCVDFEYRAVPLFLQTKKMIDENILGKIYLIKLDWLMGSRSDPNRAWNWYSLKEKGG
CCEEEEEECCCEEEEEEHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCEEEECCCCC
GVVGALGTHAFDMLNWFFGESIVVSGKLSTSIKKRSLPNSSKFLKVTSEDICIANLEIKT
EEEEEHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCCCEEEEECCCEEEEEEEEEE
FDDIIVPCQVSLSSISKCGRGFSLEVYGSEGSLFLKSENQKDYVHGFNLKISNREDKTYN
CCCEEEEEEECHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCEEEEEEEECCCCCCEEE
LSADPRYDFEKTWTDGRIAPVQRIQSLWAHSIKNQTPVIPGLSEGLNSQRVCEAIRKSAE
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHH
SGLNVRI
CCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]