Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123966019

Identifier: 123966019

GI number: 123966019

Start: 707510

End: 708430

Strand: Reverse

Name: 123966019

Synonym: P9515_07841

Alternate gene names: NA

Gene position: 708430-707510 (Counterclockwise)

Preceding gene: 123966037

Following gene: 123966017

Centisome position: 41.57

GC content: 28.01

Gene sequence:

>921_bases
ATGAAAATTCTTGTAATGGGTGGAACAAGATTTGTTGGAAAGTCTTTGGTAGGTAAGTTGCTCAATCATAAGTATGATAT
TGATATCTTTACAAGGGGCAATAAATCTAATCCTGAGAATACAAATTTAATAAAAGGTGATAGAAATAACATTGAAAGTT
TACTTAAACTAAAAAATAAAAAATATGATGTGATTTACGATATATCTGGTCGTGAATTAGAACAAACTAAACTTCTTATG
GAGATTTTAGCCGATTCTTTCCATAGATATATCTATGTTAGTTCTGCTGGAGTCTATAAAGATAATTATGAATTACCTTT
ATCCGAGAATGCTCCCCTAGACCCTAATAGTAGACACAAAGGGAAATTCGAAACTGAAAATTGGTTAGTTAAGCAAAAGA
TACCTTTTACAAGTTTTAGACCTACTTATATTTATGGTCCTGGAAATTATAATAAAATTGAAAATTGGTTCTTTGAAAGA
CTTTTTCATCTTAAAACAATCCCGATTCCTGCTGATGGTTCCTTGATTACTCAGTTAGGACATGTTTCCGATCTAAGTGA
TGTAATGATTAGGTGTTTAGATTTTGAAAAATCAAAAAATAATATATATAACTGCTCTGGAAATAAAGGAGTAACTATCA
AGGGTTTAATTTATATGTGTGCAGAGGTTTGTGGTTTAAATAAAAAAGATATTTTTTTAAATAAATTCGATTTTCAAAAA
TTAGATACCAAATCAAGAAAGAATTTCCCGATAAGATTAAATCATTATCAAACTGATATATCCAAAATAAAAAATGATTT
AAATTGGGAACCAAAATTTGATTTATTGAGAGGTTTGAAAGACAGTTTTATTAATGATTATGATCTTAAAAAAGACGAGG
AATTTGATAACAACTCAGATAAAGTTCTTTTTAGCTCTTAA

Upstream 100 bases:

>100_bases
AATTTCATTGATTCATCCTTTTCATTAATTACTTCTTAGTAGTACTATTCATTATGTAGTTCTAATTAAGATTACTACTT
TTGTTTAATACTTTTGAAAT

Downstream 100 bases:

>100_bases
ATAATCTATTAAAGTTATAAGAGATAAAATAAACCCTAGCCAATAAAATATTATTCCTAAATTAGAAAATGAATCTATTT
CAAATGGTAGAAAAAATAAT

Product: putative mRNA binding protein

Products: NA

Alternate protein names: Isoflavone Reductase; Nucleotide Sugar Epimerase; DTDP-Glucose 4 6-Dehydratase; Nucleoside-Diphosphate-Sugar Epimerase; UDP-Glucose 4-Epimerase; NAD Dependent Epimerase/Dehydratase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; NADH Dehydrogenase; Dtdpglucose 4 6-Dehydratase-Like Protein; NAD Dependent Epimerase/Dehydratase Family

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MKILVMGGTRFVGKSLVGKLLNHKYDIDIFTRGNKSNPENTNLIKGDRNNIESLLKLKNKKYDVIYDISGRELEQTKLLM
EILADSFHRYIYVSSAGVYKDNYELPLSENAPLDPNSRHKGKFETENWLVKQKIPFTSFRPTYIYGPGNYNKIENWFFER
LFHLKTIPIPADGSLITQLGHVSDLSDVMIRCLDFEKSKNNIYNCSGNKGVTIKGLIYMCAEVCGLNKKDIFLNKFDFQK
LDTKSRKNFPIRLNHYQTDISKIKNDLNWEPKFDLLRGLKDSFINDYDLKKDEEFDNNSDKVLFSS

Sequences:

>Translated_306_residues
MKILVMGGTRFVGKSLVGKLLNHKYDIDIFTRGNKSNPENTNLIKGDRNNIESLLKLKNKKYDVIYDISGRELEQTKLLM
EILADSFHRYIYVSSAGVYKDNYELPLSENAPLDPNSRHKGKFETENWLVKQKIPFTSFRPTYIYGPGNYNKIENWFFER
LFHLKTIPIPADGSLITQLGHVSDLSDVMIRCLDFEKSKNNIYNCSGNKGVTIKGLIYMCAEVCGLNKKDIFLNKFDFQK
LDTKSRKNFPIRLNHYQTDISKIKNDLNWEPKFDLLRGLKDSFINDYDLKKDEEFDNNSDKVLFSS
>Mature_306_residues
MKILVMGGTRFVGKSLVGKLLNHKYDIDIFTRGNKSNPENTNLIKGDRNNIESLLKLKNKKYDVIYDISGRELEQTKLLM
EILADSFHRYIYVSSAGVYKDNYELPLSENAPLDPNSRHKGKFETENWLVKQKIPFTSFRPTYIYGPGNYNKIENWFFER
LFHLKTIPIPADGSLITQLGHVSDLSDVMIRCLDFEKSKNNIYNCSGNKGVTIKGLIYMCAEVCGLNKKDIFLNKFDFQK
LDTKSRKNFPIRLNHYQTDISKIKNDLNWEPKFDLLRGLKDSFINDYDLKKDEEFDNNSDKVLFSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35558; Mature: 35558

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVMGGTRFVGKSLVGKLLNHKYDIDIFTRGNKSNPENTNLIKGDRNNIESLLKLKNK
CEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEECCCHHHHHHHHHHCCC
KYDVIYDISGRELEQTKLLMEILADSFHRYIYVSSAGVYKDNYELPLSENAPLDPNSRHK
CEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEEECCCEECCCCCCCCCCCCCCCCCCCCC
GKFETENWLVKQKIPFTSFRPTYIYGPGNYNKIENWFFERLFHLKTIPIPADGSLITQLG
CCCCCCCEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHEECCCCCCCHHHHHHH
HVSDLSDVMIRCLDFEKSKNNIYNCSGNKGVTIKGLIYMCAEVCGLNKKDIFLNKFDFQK
CCCCHHHHHHHHHCCCCCCCCEEECCCCCCEEHHHHHHHHHHHHCCCCCCEEEECCCCHH
LDTKSRKNFPIRLNHYQTDISKIKNDLNWEPKFDLLRGLKDSFINDYDLKKDEEFDNNSD
HCCCCCCCCCEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
KVLFSS
EEEEEC
>Mature Secondary Structure
MKILVMGGTRFVGKSLVGKLLNHKYDIDIFTRGNKSNPENTNLIKGDRNNIESLLKLKNK
CEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEECCCHHHHHHHHHHCCC
KYDVIYDISGRELEQTKLLMEILADSFHRYIYVSSAGVYKDNYELPLSENAPLDPNSRHK
CEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEEECCCEECCCCCCCCCCCCCCCCCCCCC
GKFETENWLVKQKIPFTSFRPTYIYGPGNYNKIENWFFERLFHLKTIPIPADGSLITQLG
CCCCCCCEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHEECCCCCCCHHHHHHH
HVSDLSDVMIRCLDFEKSKNNIYNCSGNKGVTIKGLIYMCAEVCGLNKKDIFLNKFDFQK
CCCCHHHHHHHHHCCCCCCCCEEECCCCCCEEHHHHHHHHHHHHCCCCCCEEEECCCCHH
LDTKSRKNFPIRLNHYQTDISKIKNDLNWEPKFDLLRGLKDSFINDYDLKKDEEFDNNSD
HCCCCCCCCCEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
KVLFSS
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA