| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966017
Identifier: 123966017
GI number: 123966017
Start: 706254
End: 706865
Strand: Reverse
Name: 123966017
Synonym: P9515_07821
Alternate gene names: NA
Gene position: 706865-706254 (Counterclockwise)
Preceding gene: 123966019
Following gene: 123966013
Centisome position: 41.48
GC content: 30.72
Gene sequence:
>612_bases ATGCAACCTCATAGCTTAAAGCTAGGTCCCGATTCTGATTTGATAATTTGTATTAAAGAATTTTCATTTTTAAATAATCT ATATGGGTATGTCTCCGGCGTAGTAGGCAATCTTAGTAAGGCTTGTATTCAGTGTCCTGGGGATCAAAAAGTTAATATAT TTGAAGGTAATCTAGAAATAGTATCTCTAAATGGACATTTTAATAAAGGAGTTGTTCATCTCCATTTAAGTTTCGCTGAT GAGAGATGTAATGTTATAGGGGGGCATTTAGAGGAGGGTTCGATTGTTAAAAAAGGAACTGATATATTATTAGTCTCTTT TGAAAACAAAACTATTAATATTTCAAATCAAAACTCAATAAAAAAACAAGCTCGAGTGAAAGCATATATTCTAAAAAGTT GTCCATGGTCGAAAAGAAGCCTTAGATTACTCGATTCATTATCTATTCCGCATGAAGTGGTCCTAATTGAAAATGATAAA GACTTTCAAAAAGTTAATTCTTTAAGCAACCATGAAACATTTCCCCAGATATTTTTAGATGATAAATTTTTTGGGGGATA TGATGAACTTTCAAAGCAAGCTCAATTTGATTACTTAAATTCATTTAAATAA
Upstream 100 bases:
>100_bases TTGTCTAACTTTAGGTTCTAACAAAATCCTAAAGAATTTGAAAACTTTTTCAAACCGCTATCATCATATTTTATATTATT AGATCATTATAGTTACCTTA
Downstream 100 bases:
>100_bases AATTTAAAAACTAATTATTTCTATTAATAACTTTTTCAGTATTTAATTCATCTTCTAACTGTTTTATTAATCTAGAAACA AGATTTTGAAACTCAGGTTG
Product: glutaredoxin
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MQPHSLKLGPDSDLIICIKEFSFLNNLYGYVSGVVGNLSKACIQCPGDQKVNIFEGNLEIVSLNGHFNKGVVHLHLSFAD ERCNVIGGHLEEGSIVKKGTDILLVSFENKTINISNQNSIKKQARVKAYILKSCPWSKRSLRLLDSLSIPHEVVLIENDK DFQKVNSLSNHETFPQIFLDDKFFGGYDELSKQAQFDYLNSFK
Sequences:
>Translated_203_residues MQPHSLKLGPDSDLIICIKEFSFLNNLYGYVSGVVGNLSKACIQCPGDQKVNIFEGNLEIVSLNGHFNKGVVHLHLSFAD ERCNVIGGHLEEGSIVKKGTDILLVSFENKTINISNQNSIKKQARVKAYILKSCPWSKRSLRLLDSLSIPHEVVLIENDK DFQKVNSLSNHETFPQIFLDDKFFGGYDELSKQAQFDYLNSFK >Mature_203_residues MQPHSLKLGPDSDLIICIKEFSFLNNLYGYVSGVVGNLSKACIQCPGDQKVNIFEGNLEIVSLNGHFNKGVVHLHLSFAD ERCNVIGGHLEEGSIVKKGTDILLVSFENKTINISNQNSIKKQARVKAYILKSCPWSKRSLRLLDSLSIPHEVVLIENDK DFQKVNSLSNHETFPQIFLDDKFFGGYDELSKQAQFDYLNSFK
Specific function: Unknown
COG id: COG1661
COG function: function code R; Predicted DNA-binding protein with PD1-like DNA-binding motif
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22835; Mature: 22835
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPHSLKLGPDSDLIICIKEFSFLNNLYGYVSGVVGNLSKACIQCPGDQKVNIFEGNLEI CCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCEEE VSLNGHFNKGVVHLHLSFADERCNVIGGHLEEGSIVKKGTDILLVSFENKTINISNQNSI EEECCCCCCCEEEEEEEECCCCCCEECCCCCCCCEEECCCCEEEEEECCCEEEECCCHHH KKQARVKAYILKSCPWSKRSLRLLDSLSIPHEVVLIENDKDFQKVNSLSNHETFPQIFLD HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHCCCCCCCCCEEEEC DKFFGGYDELSKQAQFDYLNSFK CCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQPHSLKLGPDSDLIICIKEFSFLNNLYGYVSGVVGNLSKACIQCPGDQKVNIFEGNLEI CCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCEEE VSLNGHFNKGVVHLHLSFADERCNVIGGHLEEGSIVKKGTDILLVSFENKTINISNQNSI EEECCCCCCCEEEEEEEECCCCCCEECCCCCCCCEEECCCCEEEEEECCCEEEECCCHHH KKQARVKAYILKSCPWSKRSLRLLDSLSIPHEVVLIENDKDFQKVNSLSNHETFPQIFLD HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHCCCCCCCCCEEEEC DKFFGGYDELSKQAQFDYLNSFK CCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA