| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965987
Identifier: 123965987
GI number: 123965987
Start: 681627
End: 682391
Strand: Direct
Name: 123965987
Synonym: P9515_07521
Alternate gene names: NA
Gene position: 681627-682391 (Clockwise)
Preceding gene: 123965985
Following gene: 123965989
Centisome position: 40.0
GC content: 32.03
Gene sequence:
>765_bases TTGTCTCTTATAAAACCGGATATTGTTTTATTTGTTGGAGATATTTCGGATGGTAATATCAGAATAATAAAGAAAATTAA TCTTATAAATATCCCTACTTTTGTGATTTTAGGAAATCATGATCGAGGAAAAGATTCTTCAGGAGAGACTCTTTTAAAAC AAATACGTGTTCTGCAAGAAAAATATTGTGCTTGGGATTTAAAGATTTTTAATAATCAATTAAATATCTTAAGTGCCAGA CCCTGTAGTTCAGGAGGTGGTTATTTTCTTTCAACTGAGGTTAAAGCTGTTTATGGTCCAATAAGTGAACAAGAGTCAGT TAATAAAATCCTCAAATGTTCAGAAAAAATTGTTAAAGACTTACCTCTTATTTTCATGTCTCATGCAGGACCCTCTGGCT TAGGTTCAGATTCAAGCAGTATTTGTGGCAAAGATTGGAAAGAGCCCGCTTGTGATTGGGGGGATAGAGATTTGGCGGTA GCTATTTCAAAAATACAAAAAAAAAGAAAAATAGATCTTGTTATTTTTGGTCATATGCATAATCATCTAAAAAGAAATAA AGGGTTTAGAAAAATGTTTGAAATTGATAAAAAAGGTACAGCTTATTTGAATTCTGCAATAGTTCCAAGATATAAAAAAA ATGAAAAGGGCGAATTAGCTGTTAACTTTTCATGGGTTGAGTTCCGAGGCACTAAACTTACTCATATTTCTCACCGATGG TATTCAGAGTTGGGAGAGATACTTGAAGAAGAAATTCTTTTTTGA
Upstream 100 bases:
>100_bases ATAGATTATATGCCTTTAAATAGAAAAAATTCTGTCAAATTTAAAAATTGCTATTGTTGGTGACTGTCACGGTCAATGGT CAGAGGCGGATATTGGAATT
Downstream 100 bases:
>100_bases AATGGAGAATTTAGGAAGAAAATCTTTAACCTTTTTTGGGTTTCTCATACCGAGAGAATACAGTTTGAGATAATAGGTAT CCTGCGATTGCTGCTGCAGT
Product: putative transcripton factor
Products: NA
Alternate protein names: Metallophosphoesterase; Phosphoesterase; Ser/Thr Protein Phosphatase Family Protein; Transcripton Factor DevT-Like; Transcripton Factor For Heterocyst Differentiation
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MSLIKPDIVLFVGDISDGNIRIIKKINLINIPTFVILGNHDRGKDSSGETLLKQIRVLQEKYCAWDLKIFNNQLNILSAR PCSSGGGYFLSTEVKAVYGPISEQESVNKILKCSEKIVKDLPLIFMSHAGPSGLGSDSSSICGKDWKEPACDWGDRDLAV AISKIQKKRKIDLVIFGHMHNHLKRNKGFRKMFEIDKKGTAYLNSAIVPRYKKNEKGELAVNFSWVEFRGTKLTHISHRW YSELGEILEEEILF
Sequences:
>Translated_254_residues MSLIKPDIVLFVGDISDGNIRIIKKINLINIPTFVILGNHDRGKDSSGETLLKQIRVLQEKYCAWDLKIFNNQLNILSAR PCSSGGGYFLSTEVKAVYGPISEQESVNKILKCSEKIVKDLPLIFMSHAGPSGLGSDSSSICGKDWKEPACDWGDRDLAV AISKIQKKRKIDLVIFGHMHNHLKRNKGFRKMFEIDKKGTAYLNSAIVPRYKKNEKGELAVNFSWVEFRGTKLTHISHRW YSELGEILEEEILF >Mature_253_residues SLIKPDIVLFVGDISDGNIRIIKKINLINIPTFVILGNHDRGKDSSGETLLKQIRVLQEKYCAWDLKIFNNQLNILSARP CSSGGGYFLSTEVKAVYGPISEQESVNKILKCSEKIVKDLPLIFMSHAGPSGLGSDSSSICGKDWKEPACDWGDRDLAVA ISKIQKKRKIDLVIFGHMHNHLKRNKGFRKMFEIDKKGTAYLNSAIVPRYKKNEKGELAVNFSWVEFRGTKLTHISHRWY SELGEILEEEILF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28739; Mature: 28607
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIKPDIVLFVGDISDGNIRIIKKINLINIPTFVILGNHDRGKDSSGETLLKQIRVLQE CCCCCCCEEEEEEECCCCCEEEEEEEEEEECCEEEEECCCCCCCCCCHHHHHHHHHHHHH KYCAWDLKIFNNQLNILSARPCSSGGGYFLSTEVKAVYGPISEQESVNKILKCSEKIVKD HHCEEEEEEECCCEEEEECCCCCCCCCEEEEECHHEEECCCCCHHHHHHHHHHHHHHHHH LPLIFMSHAGPSGLGSDSSSICGKDWKEPACDWGDRDLAVAISKIQKKRKIDLVIFGHMH CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCHH NHLKRNKGFRKMFEIDKKGTAYLNSAIVPRYKKNEKGELAVNFSWVEFRGTKLTHISHRW HHHHHCCCHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCEEEEHHHHH YSELGEILEEEILF HHHHHHHHHHHHCC >Mature Secondary Structure SLIKPDIVLFVGDISDGNIRIIKKINLINIPTFVILGNHDRGKDSSGETLLKQIRVLQE CCCCCCEEEEEEECCCCCEEEEEEEEEEECCEEEEECCCCCCCCCCHHHHHHHHHHHHH KYCAWDLKIFNNQLNILSARPCSSGGGYFLSTEVKAVYGPISEQESVNKILKCSEKIVKD HHCEEEEEEECCCEEEEECCCCCCCCCEEEEECHHEEECCCCCHHHHHHHHHHHHHHHHH LPLIFMSHAGPSGLGSDSSSICGKDWKEPACDWGDRDLAVAISKIQKKRKIDLVIFGHMH CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCHH NHLKRNKGFRKMFEIDKKGTAYLNSAIVPRYKKNEKGELAVNFSWVEFRGTKLTHISHRW HHHHHCCCHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCEEEEHHHHH YSELGEILEEEILF HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA