| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965989
Identifier: 123965989
GI number: 123965989
Start: 683247
End: 684437
Strand: Direct
Name: 123965989
Synonym: P9515_07541
Alternate gene names: NA
Gene position: 683247-684437 (Clockwise)
Preceding gene: 123965987
Following gene: 123965991
Centisome position: 40.09
GC content: 29.47
Gene sequence:
>1191_bases ATGAACAGCTTACCCGCGAATAATCCAGAGTGGTTAATAAAAAAAATAATAAAAAAGGGAGGAACTATTAGTTTTTATGA CTATATGAACTTGGTTTTGAATGATCCAAATAACGGATACTACGGAAGTGGTAAAGCTAATTTAGGATCTAAGGGGGATT TTGTTACTGCACCATCGATGTCTGATGACTTTGCTTTTTTCTTATCGAAACAAATTTACCAATGGTTGATTCAAGTGAAA AGCAAATCAGTTTCTTTTGACAATCTATCTGTTCTTGAGTTCGGAGCAGGAGACGGAAGCCTTATGAGTGGACTTCTTCA TTATTTATTTATTTATAACAAACAATTTTTTAGCAATGTTTCTTTTATCATTATTGAACCTAATAAAGGAATGATAAATA AACAGAAAGAGAAATTAGAAAAATATTTAAATTTGGGTTTTAATATTATGTGGAGAAGCTTAGAAGAGTTAGAAGATAAA AGTTTAAATGGCGTTATCCTAGCTAATGAAGTACTTGACGCTTTGCCAGTAGAAAGATTAATAAATTTAAAGGGTAAAAT TTATCGTCAAGGAGTGTCTTTAGATAAGGAAACGGGACGATTATTTTTTAAAGAAATTAAAATTTCAAAAGAGTTAGAAA AAAGTATAGTTTTTGCAAAAGAAAATTTAAATATTTATATTCCTCCTAAGGATGCTCCTGAAGGATGGACTACAGAATGG CATACAGATAATAAAAGTTGGTTAAAGGCTGTTTATGAAAAAATTAATAATGGAATTCTACTTGTAATTGACTACGCCAA AGAGGCTAAAAGATATTATTCATTGAGTAATAATAATGGAACATTAATTTCTTATAAAAACCAAAAAATTATTGAAGATG TTTTTGAGTCTCCAGGAAATTGTGATTTAACTTCTCATATTTGTATTGAAAGTTTAATTTATGATTCTGAAACTTTAGGC TTTGAAACTATGGGTATAGTCAAACAAGGCGAGGCACTATTGTTACTTGGTTTGGCAGAGAGACTTTTTGAAATTCAGAA TGAACTAAAGGATGATATCTCGAAGGCTCTTTCAAGAAGAGAAGCGTTATTGAGATTAGTTGACCCAATATGTTTAGGAG ATTTTAAATGGTTTGTTTTTAGTAAATTTAAGAACAAGAAAATAAAAATAAAATCAAGATGTATTAGCTAA
Upstream 100 bases:
>100_bases GGCTCATTAAAAATTAAAACTATTAGAGATAGAATTATTCCTAAGAAATAGTTAATCTTTGAATGCATAAAAAGTTTTTT GTCTTTATGTATTTTCGCCG
Downstream 100 bases:
>100_bases TCGAAATATTTTAAGAATTGTGACTCTTTTATATCATTAAAAATATCAACTTCTCCAATCCCTTTAGGTAGAATAAACCT CATTTTTCCATCGCGTACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MNSLPANNPEWLIKKIIKKGGTISFYDYMNLVLNDPNNGYYGSGKANLGSKGDFVTAPSMSDDFAFFLSKQIYQWLIQVK SKSVSFDNLSVLEFGAGDGSLMSGLLHYLFIYNKQFFSNVSFIIIEPNKGMINKQKEKLEKYLNLGFNIMWRSLEELEDK SLNGVILANEVLDALPVERLINLKGKIYRQGVSLDKETGRLFFKEIKISKELEKSIVFAKENLNIYIPPKDAPEGWTTEW HTDNKSWLKAVYEKINNGILLVIDYAKEAKRYYSLSNNNGTLISYKNQKIIEDVFESPGNCDLTSHICIESLIYDSETLG FETMGIVKQGEALLLLGLAERLFEIQNELKDDISKALSRREALLRLVDPICLGDFKWFVFSKFKNKKIKIKSRCIS
Sequences:
>Translated_396_residues MNSLPANNPEWLIKKIIKKGGTISFYDYMNLVLNDPNNGYYGSGKANLGSKGDFVTAPSMSDDFAFFLSKQIYQWLIQVK SKSVSFDNLSVLEFGAGDGSLMSGLLHYLFIYNKQFFSNVSFIIIEPNKGMINKQKEKLEKYLNLGFNIMWRSLEELEDK SLNGVILANEVLDALPVERLINLKGKIYRQGVSLDKETGRLFFKEIKISKELEKSIVFAKENLNIYIPPKDAPEGWTTEW HTDNKSWLKAVYEKINNGILLVIDYAKEAKRYYSLSNNNGTLISYKNQKIIEDVFESPGNCDLTSHICIESLIYDSETLG FETMGIVKQGEALLLLGLAERLFEIQNELKDDISKALSRREALLRLVDPICLGDFKWFVFSKFKNKKIKIKSRCIS >Mature_396_residues MNSLPANNPEWLIKKIIKKGGTISFYDYMNLVLNDPNNGYYGSGKANLGSKGDFVTAPSMSDDFAFFLSKQIYQWLIQVK SKSVSFDNLSVLEFGAGDGSLMSGLLHYLFIYNKQFFSNVSFIIIEPNKGMINKQKEKLEKYLNLGFNIMWRSLEELEDK SLNGVILANEVLDALPVERLINLKGKIYRQGVSLDKETGRLFFKEIKISKELEKSIVFAKENLNIYIPPKDAPEGWTTEW HTDNKSWLKAVYEKINNGILLVIDYAKEAKRYYSLSNNNGTLISYKNQKIIEDVFESPGNCDLTSHICIESLIYDSETLG FETMGIVKQGEALLLLGLAERLFEIQNELKDDISKALSRREALLRLVDPICLGDFKWFVFSKFKNKKIKIKSRCIS
Specific function: Unknown
COG id: COG1565
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI193211224, Length=366, Percent_Identity=25.1366120218579, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI24645885, Length=392, Percent_Identity=23.7244897959184, Blast_Score=75, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45245; Mature: 45245
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSLPANNPEWLIKKIIKKGGTISFYDYMNLVLNDPNNGYYGSGKANLGSKGDFVTAPSM CCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCC SDDFAFFLSKQIYQWLIQVKSKSVSFDNLSVLEFGAGDGSLMSGLLHYLFIYNKQFFSNV CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC SFIIIEPNKGMINKQKEKLEKYLNLGFNIMWRSLEELEDKSLNGVILANEVLDALPVERL EEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHH INLKGKIYRQGVSLDKETGRLFFKEIKISKELEKSIVFAKENLNIYIPPKDAPEGWTTEW HCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCEEEECCCCCCCCCCCCC HTDNKSWLKAVYEKINNGILLVIDYAKEAKRYYSLSNNNGTLISYKNQKIIEDVFESPGN CCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHEEEECCCCCEEEECCHHHHHHHHCCCCC CDLTSHICIESLIYDSETLGFETMGIVKQGEALLLLGLAERLFEIQNELKDDISKALSRR CCCHHHHHHHHHHCCCHHCCCHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH EALLRLVDPICLGDFKWFVFSKFKNKKIKIKSRCIS HHHHHHHHHHHHCCHHHHHHHHCCCCEEEECCCCCC >Mature Secondary Structure MNSLPANNPEWLIKKIIKKGGTISFYDYMNLVLNDPNNGYYGSGKANLGSKGDFVTAPSM CCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCC SDDFAFFLSKQIYQWLIQVKSKSVSFDNLSVLEFGAGDGSLMSGLLHYLFIYNKQFFSNV CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC SFIIIEPNKGMINKQKEKLEKYLNLGFNIMWRSLEELEDKSLNGVILANEVLDALPVERL EEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHH INLKGKIYRQGVSLDKETGRLFFKEIKISKELEKSIVFAKENLNIYIPPKDAPEGWTTEW HCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCEEEECCCCCCCCCCCCC HTDNKSWLKAVYEKINNGILLVIDYAKEAKRYYSLSNNNGTLISYKNQKIIEDVFESPGN CCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHEEEECCCCCEEEECCHHHHHHHHCCCCC CDLTSHICIESLIYDSETLGFETMGIVKQGEALLLLGLAERLFEIQNELKDDISKALSRR CCCHHHHHHHHHHCCCHHCCCHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH EALLRLVDPICLGDFKWFVFSKFKNKKIKIKSRCIS HHHHHHHHHHHHCCHHHHHHHHCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA