Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123965816

Identifier: 123965816

GI number: 123965816

Start: 518917

End: 519339

Strand: Direct

Name: 123965816

Synonym: P9515_05811

Alternate gene names: NA

Gene position: 518917-519339 (Clockwise)

Preceding gene: 123965815

Following gene: 123965817

Centisome position: 30.45

GC content: 21.99

Gene sequence:

>423_bases
ATGAACATATTTGAGAATGAAAATTCTTTAAGCAAAAATCTCTATAATACTAATCAAGAAAATTCAAAAAATATATCTTT
ATTTAATTTAAAATTAATCCATAAAATATTGAATAGCATAAATATTTCATTACTAATTTTAATTTTTATGCTTTCTTTTA
TTTCTTTTAAAAGTCAAAGGAACTGGACAATCATATACAAAAATCTAGCCAAAACAAGATCAAATAATAATAATCTTATA
GATTACATTTCTAAGACTGAAGAGTTTTTTATTAATGAAGTTGAGTCCCTTAATACATTTAAAAAAACAACTCCAAAGGA
TTTAATTTACCTCGATAAGCAAATTCCTAAGCAGAAAAAAAATGAATTAATTAATAATATTCGAGATGGATTAAAGGATA
GTCAATACCAAAGAGGCTATTAA

Upstream 100 bases:

>100_bases
CTATTGAGAACATAAAGATTGAGATATATTCCTTGCATAATAATTTAAAAGATGTTTACTTGATGCATAACACTTTTTAT
CTTTTTAATAATTCTTAGAG

Downstream 100 bases:

>100_bases
TGAAAAGAAATAAGAAAATTGTTAAACTCGCCCCTCTTAAAGCTCGAAGGTTTAAGGTCACGTATATATTTTGTTTGACA
TTAATTTTTGGACTTTTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MNIFENENSLSKNLYNTNQENSKNISLFNLKLIHKILNSINISLLILIFMLSFISFKSQRNWTIIYKNLAKTRSNNNNLI
DYISKTEEFFINEVESLNTFKKTTPKDLIYLDKQIPKQKKNELINNIRDGLKDSQYQRGY

Sequences:

>Translated_140_residues
MNIFENENSLSKNLYNTNQENSKNISLFNLKLIHKILNSINISLLILIFMLSFISFKSQRNWTIIYKNLAKTRSNNNNLI
DYISKTEEFFINEVESLNTFKKTTPKDLIYLDKQIPKQKKNELINNIRDGLKDSQYQRGY
>Mature_140_residues
MNIFENENSLSKNLYNTNQENSKNISLFNLKLIHKILNSINISLLILIFMLSFISFKSQRNWTIIYKNLAKTRSNNNNLI
DYISKTEEFFINEVESLNTFKKTTPKDLIYLDKQIPKQKKNELINNIRDGLKDSQYQRGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16602; Mature: 16602

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIFENENSLSKNLYNTNQENSKNISLFNLKLIHKILNSINISLLILIFMLSFISFKSQR
CCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
NWTIIYKNLAKTRSNNNNLIDYISKTEEFFINEVESLNTFKKTTPKDLIYLDKQIPKQKK
CEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHCCHHHH
NELINNIRDGLKDSQYQRGY
HHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNIFENENSLSKNLYNTNQENSKNISLFNLKLIHKILNSINISLLILIFMLSFISFKSQR
CCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
NWTIIYKNLAKTRSNNNNLIDYISKTEEFFINEVESLNTFKKTTPKDLIYLDKQIPKQKK
CEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHCCHHHH
NELINNIRDGLKDSQYQRGY
HHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA