| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965815
Identifier: 123965815
GI number: 123965815
Start: 517473
End: 518831
Strand: Direct
Name: 123965815
Synonym: P9515_05801
Alternate gene names: NA
Gene position: 517473-518831 (Clockwise)
Preceding gene: 123965812
Following gene: 123965816
Centisome position: 30.36
GC content: 27.81
Gene sequence:
>1359_bases ATGAATAAAAATACCTCAAAGACAAAAATATTTTTGGTTTTTATTTCCTTAATAATAACATTTCTTGTCTGGCAACAAGG ACTTCGCGATAGTCTTAGCAGACCTTCCGTTGGATTTGATATAGGTCAAAAAGAAAAAGAAATTACAGAATTAGCTTTGC CTGCAATACCTGATGAATTTAGAAAAATTCTTGTTGTCAATGATCCAATTGAAGAGATTAAAACTTCTCTTTCTGAGATT TCTTTTAGTGAATTAACAGAGAGGAATAAATTAATTTGGATAATTTCTTTAAGTGACAATGAGATAAAAGATAATGATGA ATACCTCAATAGCTTTGACAATAAAAAATATAAATTGGTAGTAAAAGATTTACGGAAAAGTAATATTGATAGTTCATATA AACCTGACGATGATTTACTAGATTTGTTCAAAGAGGATAGATTTCTATACCACTTGCTAAGTAAAAGATTTGATTTTAAT GAGAGTCAATTGATAACAAATGCGCTTTCTAAAAAAATGTTTTTAAAAATCATAGTTATTAGATTAGTACCTATATTAAC AATAGTTTTGGGTTCAATACTAGTCCTAAGAACATCATGGAGTCTTCTAGTCTCAAGAAAAATTGAATGGGGAGAATTCA AACCTCTAGATTTAGATTTGTTGGATATGATTTTGTTGATATCAGGAGGATTTGTTGTTCTGGGAGAAGTGATTTCCCCT TTGTTTTCTATAACTTTAGTTGAATTGTTCTCCTCTAATCTATCAATTGAGTTAATACAATCATTAAAAATATTTTTTGG ATATCTTTTTATGGCAATTCCTCCTCTTTTAATTATTTATTATCAAATAAAGTCTTTCGATAATAAATTTATTTTTAAAA AAGATTATTTTCAATTTAAATTTTTACCCATTAAAGAATCGATATTTCAGGGATTCAAGGGTTTTTTAATGATAATACCT TTTGTTTTGTTGGTATCATTAATTATGAATCTTTTAATTGAGAATCAAAATGGGAGTAATCCGTTGCTTGAAATCGTTTT AAATAATAATAATTATTTTTCTTTTTTCCTTTTGTTTTTAACAACTACATTTTTAGCTCCGTTGTTTGAGGAGGTTATTT TTCGAGGAGTTTTGCTACCAATTTTATCAAGAGAATTTGGTATTATATTGGGTATTACGATTTCTGCTTTTATTTTTGCC TTGGCTCATTTGAGTATAGGTGAAATGCCACCATTGTTTACGTTAGGGTTGGGGTTGGGAATTACAAGAATGATTTCAGG AAGATTATCATCTTCTATAGTTATGCATTCTTTATGGAATGGAATGACTTTTTTGAATTTGTTACTATTGAGAACATAA
Upstream 100 bases:
>100_bases GTAGTATTTTAATCATCTCATGGCGTGATAAAAATAGGTATAAGATTATTAGAAATTTCAATGAAAACTAAATTTAGTTT TATAATTTATTATCGTATAT
Downstream 100 bases:
>100_bases AGATTGAGATATATTCCTTGCATAATAATTTAAAAGATGTTTACTTGATGCATAACACTTTTTATCTTTTTAATAATTCT TAGAGATGAACATATTTGAG
Product: membrane-associated protease
Products: NA
Alternate protein names: Membrane-Associated Protease; Metal-Dependent Membrane Protease; Membrane Associated Protease; CAAX Amino Terminal Protease Family Protein; CAAX Amino Terminal Protease Family; Caax Amino Terminal Protease Family Protein; Membrane Associated Protease-Like; CAAX Amino Protease
Number of amino acids: Translated: 452; Mature: 452
Protein sequence:
>452_residues MNKNTSKTKIFLVFISLIITFLVWQQGLRDSLSRPSVGFDIGQKEKEITELALPAIPDEFRKILVVNDPIEEIKTSLSEI SFSELTERNKLIWIISLSDNEIKDNDEYLNSFDNKKYKLVVKDLRKSNIDSSYKPDDDLLDLFKEDRFLYHLLSKRFDFN ESQLITNALSKKMFLKIIVIRLVPILTIVLGSILVLRTSWSLLVSRKIEWGEFKPLDLDLLDMILLISGGFVVLGEVISP LFSITLVELFSSNLSIELIQSLKIFFGYLFMAIPPLLIIYYQIKSFDNKFIFKKDYFQFKFLPIKESIFQGFKGFLMIIP FVLLVSLIMNLLIENQNGSNPLLEIVLNNNNYFSFFLLFLTTTFLAPLFEEVIFRGVLLPILSREFGIILGITISAFIFA LAHLSIGEMPPLFTLGLGLGITRMISGRLSSSIVMHSLWNGMTFLNLLLLRT
Sequences:
>Translated_452_residues MNKNTSKTKIFLVFISLIITFLVWQQGLRDSLSRPSVGFDIGQKEKEITELALPAIPDEFRKILVVNDPIEEIKTSLSEI SFSELTERNKLIWIISLSDNEIKDNDEYLNSFDNKKYKLVVKDLRKSNIDSSYKPDDDLLDLFKEDRFLYHLLSKRFDFN ESQLITNALSKKMFLKIIVIRLVPILTIVLGSILVLRTSWSLLVSRKIEWGEFKPLDLDLLDMILLISGGFVVLGEVISP LFSITLVELFSSNLSIELIQSLKIFFGYLFMAIPPLLIIYYQIKSFDNKFIFKKDYFQFKFLPIKESIFQGFKGFLMIIP FVLLVSLIMNLLIENQNGSNPLLEIVLNNNNYFSFFLLFLTTTFLAPLFEEVIFRGVLLPILSREFGIILGITISAFIFA LAHLSIGEMPPLFTLGLGLGITRMISGRLSSSIVMHSLWNGMTFLNLLLLRT >Mature_452_residues MNKNTSKTKIFLVFISLIITFLVWQQGLRDSLSRPSVGFDIGQKEKEITELALPAIPDEFRKILVVNDPIEEIKTSLSEI SFSELTERNKLIWIISLSDNEIKDNDEYLNSFDNKKYKLVVKDLRKSNIDSSYKPDDDLLDLFKEDRFLYHLLSKRFDFN ESQLITNALSKKMFLKIIVIRLVPILTIVLGSILVLRTSWSLLVSRKIEWGEFKPLDLDLLDMILLISGGFVVLGEVISP LFSITLVELFSSNLSIELIQSLKIFFGYLFMAIPPLLIIYYQIKSFDNKFIFKKDYFQFKFLPIKESIFQGFKGFLMIIP FVLLVSLIMNLLIENQNGSNPLLEIVLNNNNYFSFFLLFLTTTFLAPLFEEVIFRGVLLPILSREFGIILGITISAFIFA LAHLSIGEMPPLFTLGLGLGITRMISGRLSSSIVMHSLWNGMTFLNLLLLRT
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51912; Mature: 51912
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKNTSKTKIFLVFISLIITFLVWQQGLRDSLSRPSVGFDIGQKEKEITELALPAIPDEF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHH RKILVVNDPIEEIKTSLSEISFSELTERNKLIWIISLSDNEIKDNDEYLNSFDNKKYKLV CEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHCCCCHHHHH VKDLRKSNIDSSYKPDDDLLDLFKEDRFLYHLLSKRFDFNESQLITNALSKKMFLKIIVI HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH RLVPILTIVLGSILVLRTSWSLLVSRKIEWGEFKPLDLDLLDMILLISGGFVVLGEVISP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHH LFSITLVELFSSNLSIELIQSLKIFFGYLFMAIPPLLIIYYQIKSFDNKFIFKKDYFQFK HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEE FLPIKESIFQGFKGFLMIIPFVLLVSLIMNLLIENQNGSNPLLEIVLNNNNYFSFFLLFL EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHH TTTFLAPLFEEVIFRGVLLPILSREFGIILGITISAFIFALAHLSIGEMPPLFTLGLGLG HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH ITRMISGRLSSSIVMHSLWNGMTFLNLLLLRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNKNTSKTKIFLVFISLIITFLVWQQGLRDSLSRPSVGFDIGQKEKEITELALPAIPDEF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHH RKILVVNDPIEEIKTSLSEISFSELTERNKLIWIISLSDNEIKDNDEYLNSFDNKKYKLV CEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHCCCCHHHHH VKDLRKSNIDSSYKPDDDLLDLFKEDRFLYHLLSKRFDFNESQLITNALSKKMFLKIIVI HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH RLVPILTIVLGSILVLRTSWSLLVSRKIEWGEFKPLDLDLLDMILLISGGFVVLGEVISP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHH LFSITLVELFSSNLSIELIQSLKIFFGYLFMAIPPLLIIYYQIKSFDNKFIFKKDYFQFK HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEE FLPIKESIFQGFKGFLMIIPFVLLVSLIMNLLIENQNGSNPLLEIVLNNNNYFSFFLLFL EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHH TTTFLAPLFEEVIFRGVLLPILSREFGIILGITISAFIFALAHLSIGEMPPLFTLGLGLG HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH ITRMISGRLSSSIVMHSLWNGMTFLNLLLLRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA