Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123965815

Identifier: 123965815

GI number: 123965815

Start: 517473

End: 518831

Strand: Direct

Name: 123965815

Synonym: P9515_05801

Alternate gene names: NA

Gene position: 517473-518831 (Clockwise)

Preceding gene: 123965812

Following gene: 123965816

Centisome position: 30.36

GC content: 27.81

Gene sequence:

>1359_bases
ATGAATAAAAATACCTCAAAGACAAAAATATTTTTGGTTTTTATTTCCTTAATAATAACATTTCTTGTCTGGCAACAAGG
ACTTCGCGATAGTCTTAGCAGACCTTCCGTTGGATTTGATATAGGTCAAAAAGAAAAAGAAATTACAGAATTAGCTTTGC
CTGCAATACCTGATGAATTTAGAAAAATTCTTGTTGTCAATGATCCAATTGAAGAGATTAAAACTTCTCTTTCTGAGATT
TCTTTTAGTGAATTAACAGAGAGGAATAAATTAATTTGGATAATTTCTTTAAGTGACAATGAGATAAAAGATAATGATGA
ATACCTCAATAGCTTTGACAATAAAAAATATAAATTGGTAGTAAAAGATTTACGGAAAAGTAATATTGATAGTTCATATA
AACCTGACGATGATTTACTAGATTTGTTCAAAGAGGATAGATTTCTATACCACTTGCTAAGTAAAAGATTTGATTTTAAT
GAGAGTCAATTGATAACAAATGCGCTTTCTAAAAAAATGTTTTTAAAAATCATAGTTATTAGATTAGTACCTATATTAAC
AATAGTTTTGGGTTCAATACTAGTCCTAAGAACATCATGGAGTCTTCTAGTCTCAAGAAAAATTGAATGGGGAGAATTCA
AACCTCTAGATTTAGATTTGTTGGATATGATTTTGTTGATATCAGGAGGATTTGTTGTTCTGGGAGAAGTGATTTCCCCT
TTGTTTTCTATAACTTTAGTTGAATTGTTCTCCTCTAATCTATCAATTGAGTTAATACAATCATTAAAAATATTTTTTGG
ATATCTTTTTATGGCAATTCCTCCTCTTTTAATTATTTATTATCAAATAAAGTCTTTCGATAATAAATTTATTTTTAAAA
AAGATTATTTTCAATTTAAATTTTTACCCATTAAAGAATCGATATTTCAGGGATTCAAGGGTTTTTTAATGATAATACCT
TTTGTTTTGTTGGTATCATTAATTATGAATCTTTTAATTGAGAATCAAAATGGGAGTAATCCGTTGCTTGAAATCGTTTT
AAATAATAATAATTATTTTTCTTTTTTCCTTTTGTTTTTAACAACTACATTTTTAGCTCCGTTGTTTGAGGAGGTTATTT
TTCGAGGAGTTTTGCTACCAATTTTATCAAGAGAATTTGGTATTATATTGGGTATTACGATTTCTGCTTTTATTTTTGCC
TTGGCTCATTTGAGTATAGGTGAAATGCCACCATTGTTTACGTTAGGGTTGGGGTTGGGAATTACAAGAATGATTTCAGG
AAGATTATCATCTTCTATAGTTATGCATTCTTTATGGAATGGAATGACTTTTTTGAATTTGTTACTATTGAGAACATAA

Upstream 100 bases:

>100_bases
GTAGTATTTTAATCATCTCATGGCGTGATAAAAATAGGTATAAGATTATTAGAAATTTCAATGAAAACTAAATTTAGTTT
TATAATTTATTATCGTATAT

Downstream 100 bases:

>100_bases
AGATTGAGATATATTCCTTGCATAATAATTTAAAAGATGTTTACTTGATGCATAACACTTTTTATCTTTTTAATAATTCT
TAGAGATGAACATATTTGAG

Product: membrane-associated protease

Products: NA

Alternate protein names: Membrane-Associated Protease; Metal-Dependent Membrane Protease; Membrane Associated Protease; CAAX Amino Terminal Protease Family Protein; CAAX Amino Terminal Protease Family; Caax Amino Terminal Protease Family Protein; Membrane Associated Protease-Like; CAAX Amino Protease

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MNKNTSKTKIFLVFISLIITFLVWQQGLRDSLSRPSVGFDIGQKEKEITELALPAIPDEFRKILVVNDPIEEIKTSLSEI
SFSELTERNKLIWIISLSDNEIKDNDEYLNSFDNKKYKLVVKDLRKSNIDSSYKPDDDLLDLFKEDRFLYHLLSKRFDFN
ESQLITNALSKKMFLKIIVIRLVPILTIVLGSILVLRTSWSLLVSRKIEWGEFKPLDLDLLDMILLISGGFVVLGEVISP
LFSITLVELFSSNLSIELIQSLKIFFGYLFMAIPPLLIIYYQIKSFDNKFIFKKDYFQFKFLPIKESIFQGFKGFLMIIP
FVLLVSLIMNLLIENQNGSNPLLEIVLNNNNYFSFFLLFLTTTFLAPLFEEVIFRGVLLPILSREFGIILGITISAFIFA
LAHLSIGEMPPLFTLGLGLGITRMISGRLSSSIVMHSLWNGMTFLNLLLLRT

Sequences:

>Translated_452_residues
MNKNTSKTKIFLVFISLIITFLVWQQGLRDSLSRPSVGFDIGQKEKEITELALPAIPDEFRKILVVNDPIEEIKTSLSEI
SFSELTERNKLIWIISLSDNEIKDNDEYLNSFDNKKYKLVVKDLRKSNIDSSYKPDDDLLDLFKEDRFLYHLLSKRFDFN
ESQLITNALSKKMFLKIIVIRLVPILTIVLGSILVLRTSWSLLVSRKIEWGEFKPLDLDLLDMILLISGGFVVLGEVISP
LFSITLVELFSSNLSIELIQSLKIFFGYLFMAIPPLLIIYYQIKSFDNKFIFKKDYFQFKFLPIKESIFQGFKGFLMIIP
FVLLVSLIMNLLIENQNGSNPLLEIVLNNNNYFSFFLLFLTTTFLAPLFEEVIFRGVLLPILSREFGIILGITISAFIFA
LAHLSIGEMPPLFTLGLGLGITRMISGRLSSSIVMHSLWNGMTFLNLLLLRT
>Mature_452_residues
MNKNTSKTKIFLVFISLIITFLVWQQGLRDSLSRPSVGFDIGQKEKEITELALPAIPDEFRKILVVNDPIEEIKTSLSEI
SFSELTERNKLIWIISLSDNEIKDNDEYLNSFDNKKYKLVVKDLRKSNIDSSYKPDDDLLDLFKEDRFLYHLLSKRFDFN
ESQLITNALSKKMFLKIIVIRLVPILTIVLGSILVLRTSWSLLVSRKIEWGEFKPLDLDLLDMILLISGGFVVLGEVISP
LFSITLVELFSSNLSIELIQSLKIFFGYLFMAIPPLLIIYYQIKSFDNKFIFKKDYFQFKFLPIKESIFQGFKGFLMIIP
FVLLVSLIMNLLIENQNGSNPLLEIVLNNNNYFSFFLLFLTTTFLAPLFEEVIFRGVLLPILSREFGIILGITISAFIFA
LAHLSIGEMPPLFTLGLGLGITRMISGRLSSSIVMHSLWNGMTFLNLLLLRT

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51912; Mature: 51912

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKNTSKTKIFLVFISLIITFLVWQQGLRDSLSRPSVGFDIGQKEKEITELALPAIPDEF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHH
RKILVVNDPIEEIKTSLSEISFSELTERNKLIWIISLSDNEIKDNDEYLNSFDNKKYKLV
CEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHCCCCHHHHH
VKDLRKSNIDSSYKPDDDLLDLFKEDRFLYHLLSKRFDFNESQLITNALSKKMFLKIIVI
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
RLVPILTIVLGSILVLRTSWSLLVSRKIEWGEFKPLDLDLLDMILLISGGFVVLGEVISP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHH
LFSITLVELFSSNLSIELIQSLKIFFGYLFMAIPPLLIIYYQIKSFDNKFIFKKDYFQFK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEE
FLPIKESIFQGFKGFLMIIPFVLLVSLIMNLLIENQNGSNPLLEIVLNNNNYFSFFLLFL
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHH
TTTFLAPLFEEVIFRGVLLPILSREFGIILGITISAFIFALAHLSIGEMPPLFTLGLGLG
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ITRMISGRLSSSIVMHSLWNGMTFLNLLLLRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNKNTSKTKIFLVFISLIITFLVWQQGLRDSLSRPSVGFDIGQKEKEITELALPAIPDEF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHH
RKILVVNDPIEEIKTSLSEISFSELTERNKLIWIISLSDNEIKDNDEYLNSFDNKKYKLV
CEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHCCCCHHHHH
VKDLRKSNIDSSYKPDDDLLDLFKEDRFLYHLLSKRFDFNESQLITNALSKKMFLKIIVI
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
RLVPILTIVLGSILVLRTSWSLLVSRKIEWGEFKPLDLDLLDMILLISGGFVVLGEVISP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHH
LFSITLVELFSSNLSIELIQSLKIFFGYLFMAIPPLLIIYYQIKSFDNKFIFKKDYFQFK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEE
FLPIKESIFQGFKGFLMIIPFVLLVSLIMNLLIENQNGSNPLLEIVLNNNNYFSFFLLFL
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHH
TTTFLAPLFEEVIFRGVLLPILSREFGIILGITISAFIFALAHLSIGEMPPLFTLGLGLG
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ITRMISGRLSSSIVMHSLWNGMTFLNLLLLRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA