| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is lgt
Identifier: 123965759
GI number: 123965759
Start: 469336
End: 470229
Strand: Reverse
Name: lgt
Synonym: P9515_05241
Alternate gene names: 123965759
Gene position: 470229-469336 (Counterclockwise)
Preceding gene: 123965760
Following gene: 123965758
Centisome position: 27.59
GC content: 29.08
Gene sequence:
>894_bases ATGCTTACACATCAAGCTTTTATTCAATCACCTGGAGATACATTTTTAAATTTAGGTTTTCTAACTATTAGATGGTATGG ACTGCTAATTTCCCTATCTGTATTAATTGGAATTTTTATTTCTAAAAAGCTTGCAAAATCAAGGAATATTAACCCTCAAT ATATAAGTGATATTCTACCTTCTTTAATAATATCATCAATCATCGGCGCTAGATTTTATTATGTAATTTTTGAATGGAAA CAATATAGTGGTAATAACTTTTTTACTTCTTTTAACCTGTTTGATAACGTAATTCAAATACCCTCTTTTCTTGCTATTTG GGAAGGGGGCATAGCAATCCATGGAGGATTAATTGGAGGATTTTTATCTATTTTATTTTTTTGCAAATCTAAAAATATTC ATCTTAAGACCTTTATGGATATACTAATTCCATCCATTATTCTTGGTCAATCAATTGGTAGATGGGGCAATTTCTTTAAT AACGAAGCTTTTGGAATACCGACAGAGTTACCATGGAAGTTATTTATACCTCTCCAAAATAGGCCAATCGAGTTTATAAA TTATCAGTTTTTTCATCCAACATTTATCTATGAATCATTATGGAATTTTTTGATTTTTATATTATTAATTTCTATTTTTT ACAAACAGAATACTAATAGCTCATTAAGACCTGGCTTTATAAGTTGTCTGTATTTAATTGGCTATAGTTTTGGAAGATTC TGGATTGAAGGTTTAAGAATTGATCCTTTATGTCTTGGGGGACTCCCACCCTTTTGCGATGGGGGATTACGGATGGCTCA GTTTATTAGTATTGTTTTATTTTCCTCTGGATTAATTGGAATATTTTTTTTAAGATTAAAAACATATAATAAAAAAACAA GAAAGAATGGATAA
Upstream 100 bases:
>100_bases CATTTTTTATCGGTGTAGGCCTAACTCAAATATTACTAGTGCTTAAGAAGAAACAAGTTGAAAAAGTACAAGCTGCTGAG GGCATTTAATTAGGCTTTAA
Downstream 100 bases:
>100_bases AAAAATCTCATTTATTGGAGTTGGTCCAGGCGATCCTGATTTATTAACAATTAAAGCGTTAAAAAAAATAAAATCAGCAG AGGTTATCTTTTGGGCTGAT
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MLTHQAFIQSPGDTFLNLGFLTIRWYGLLISLSVLIGIFISKKLAKSRNINPQYISDILPSLIISSIIGARFYYVIFEWK QYSGNNFFTSFNLFDNVIQIPSFLAIWEGGIAIHGGLIGGFLSILFFCKSKNIHLKTFMDILIPSIILGQSIGRWGNFFN NEAFGIPTELPWKLFIPLQNRPIEFINYQFFHPTFIYESLWNFLIFILLISIFYKQNTNSSLRPGFISCLYLIGYSFGRF WIEGLRIDPLCLGGLPPFCDGGLRMAQFISIVLFSSGLIGIFFLRLKTYNKKTRKNG
Sequences:
>Translated_297_residues MLTHQAFIQSPGDTFLNLGFLTIRWYGLLISLSVLIGIFISKKLAKSRNINPQYISDILPSLIISSIIGARFYYVIFEWK QYSGNNFFTSFNLFDNVIQIPSFLAIWEGGIAIHGGLIGGFLSILFFCKSKNIHLKTFMDILIPSIILGQSIGRWGNFFN NEAFGIPTELPWKLFIPLQNRPIEFINYQFFHPTFIYESLWNFLIFILLISIFYKQNTNSSLRPGFISCLYLIGYSFGRF WIEGLRIDPLCLGGLPPFCDGGLRMAQFISIVLFSSGLIGIFFLRLKTYNKKTRKNG >Mature_297_residues MLTHQAFIQSPGDTFLNLGFLTIRWYGLLISLSVLIGIFISKKLAKSRNINPQYISDILPSLIISSIIGARFYYVIFEWK QYSGNNFFTSFNLFDNVIQIPSFLAIWEGGIAIHGGLIGGFLSILFFCKSKNIHLKTFMDILIPSIILGQSIGRWGNFFN NEAFGIPTELPWKLFIPLQNRPIEFINYQFFHPTFIYESLWNFLIFILLISIFYKQNTNSSLRPGFISCLYLIGYSFGRF WIEGLRIDPLCLGGLPPFCDGGLRMAQFISIVLFSSGLIGIFFLRLKTYNKKTRKNG
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family
Homologues:
Organism=Escherichia coli, GI1789192, Length=287, Percent_Identity=26.1324041811847, Blast_Score=68, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LGT_PROM5 (A2BVC2)
Other databases:
- EMBL: CP000552 - RefSeq: YP_001010840.1 - STRING: A2BVC2 - GeneID: 4720037 - GenomeReviews: CP000552_GR - KEGG: pmc:P9515_05241 - eggNOG: COG0682 - HOGENOM: HBG450278 - OMA: MAQFISI - ProtClustDB: PRK00052 - BioCyc: PMAR167542:P9515ORF_0558-MONOMER - HAMAP: MF_01147 - InterPro: IPR001640 - TIGRFAMs: TIGR00544
Pfam domain/function: PF01790 LGT
EC number: 2.4.99.- [C]
Molecular weight: Translated: 34051; Mature: 34051
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x191a3788)-; HASH(0x192c2470)-; HASH(0x192c232c)-; HASH(0x192c4f44)-; HASH(0x192c74d8)-; HASH(0x192c74a8)-; HASH(0x1853df00)-;
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTHQAFIQSPGDTFLNLGFLTIRWYGLLISLSVLIGIFISKKLAKSRNINPQYISDILP CCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH SLIISSIIGARFYYVIFEWKQYSGNNFFTSFNLFDNVIQIPSFLAIWEGGIAIHGGLIGG HHHHHHHHHHHHEEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHCCCEEEEHHHHHH FLSILFFCKSKNIHLKTFMDILIPSIILGQSIGRWGNFFNNEAFGIPTELPWKLFIPLQN HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCC RPIEFINYQFFHPTFIYESLWNFLIFILLISIFYKQNTNSSLRPGFISCLYLIGYSFGRF CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH WIEGLRIDPLCLGGLPPFCDGGLRMAQFISIVLFSSGLIGIFFLRLKTYNKKTRKNG HHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHCCCH >Mature Secondary Structure MLTHQAFIQSPGDTFLNLGFLTIRWYGLLISLSVLIGIFISKKLAKSRNINPQYISDILP CCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH SLIISSIIGARFYYVIFEWKQYSGNNFFTSFNLFDNVIQIPSFLAIWEGGIAIHGGLIGG HHHHHHHHHHHHEEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHCCCEEEEHHHHHH FLSILFFCKSKNIHLKTFMDILIPSIILGQSIGRWGNFFNNEAFGIPTELPWKLFIPLQN HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCC RPIEFINYQFFHPTFIYESLWNFLIFILLISIFYKQNTNSSLRPGFISCLYLIGYSFGRF CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH WIEGLRIDPLCLGGLPPFCDGGLRMAQFISIVLFSSGLIGIFFLRLKTYNKKTRKNG HHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA