| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965680
Identifier: 123965680
GI number: 123965680
Start: 395843
End: 396556
Strand: Reverse
Name: 123965680
Synonym: P9515_04451
Alternate gene names: NA
Gene position: 396556-395843 (Counterclockwise)
Preceding gene: 123965681
Following gene: 123965679
Centisome position: 23.27
GC content: 36.41
Gene sequence:
>714_bases ATGAGAGAAGAGCTTTTCAGATTAAAGAATCCTTTAATAAATAGTGGACTTATTTCAGCTTTAAGATATCCAGAGTCTAT AGGTTTAGAGAAAGTAGAATCCGAAGTAGATCTTACTGACCTCTCAAAACTTGTAGATCAACTAATCCTTGAAAATATAA AAGGTTCAAACCTGGATGAGAGATTGGTCGAGTGCGTTCATAAAACATTTAAACCGCTTCCTTCTCATGTTCTTACTGAT ATGAGAATGTGGCATTGGCTTTGCGTAATAAAATATCCAAACATTCCCTGGCTTAGATGGAGAGGGAGTATTCCTATTGA CCCTGAAGATGGATTTACGGTTGGAACAGGCAAAAAACATGTTCCTTCTATAAGATTTCTTGGGACATCTTCAATTAATG GTCATGGGAGAAATACCTTTTCCAGACTTTTCTTTGCCGCAGATAGGATGATGGATAAAAGTCAATCTGACTACACTCTG GTCAAAAAACTTTTCACGAGTCAGGAACTTCATCTCGGTTTAAGTGACAGAGAATTTGGCTTGATACCCAAGATAAATAG AGTATTAACAGAAAAGCTTGTTGAATTGCCAGACAGCAAAGTAAGAATTGCGATAAGAAAACTTAATTCTCTGGGTGGCT CTATATGTCTTGATCTATTGAGTGAAGAACAACTGCAAAAATTAATTGATATTCAGGATAAGGAGGCTTCATGA
Upstream 100 bases:
>100_bases TTCAACAGGAAACAAAGATAATGGAATTAGCAGAAATAATGGCAAGAGGTTGTAGTTTTGAATCAGAGAGTTCAAAGATG CCTAAGAAAGAGGAGGTCGC
Downstream 100 bases:
>100_bases TACATAAGAATGCAGTAGGAAAAATTGATCCACATAGATTAACTCCTGTCAGAGGTCCTTCAACAGAACTTGATCCTCAT ATTGATTCATGCGAATTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MREELFRLKNPLINSGLISALRYPESIGLEKVESEVDLTDLSKLVDQLILENIKGSNLDERLVECVHKTFKPLPSHVLTD MRMWHWLCVIKYPNIPWLRWRGSIPIDPEDGFTVGTGKKHVPSIRFLGTSSINGHGRNTFSRLFFAADRMMDKSQSDYTL VKKLFTSQELHLGLSDREFGLIPKINRVLTEKLVELPDSKVRIAIRKLNSLGGSICLDLLSEEQLQKLIDIQDKEAS
Sequences:
>Translated_237_residues MREELFRLKNPLINSGLISALRYPESIGLEKVESEVDLTDLSKLVDQLILENIKGSNLDERLVECVHKTFKPLPSHVLTD MRMWHWLCVIKYPNIPWLRWRGSIPIDPEDGFTVGTGKKHVPSIRFLGTSSINGHGRNTFSRLFFAADRMMDKSQSDYTL VKKLFTSQELHLGLSDREFGLIPKINRVLTEKLVELPDSKVRIAIRKLNSLGGSICLDLLSEEQLQKLIDIQDKEAS >Mature_237_residues MREELFRLKNPLINSGLISALRYPESIGLEKVESEVDLTDLSKLVDQLILENIKGSNLDERLVECVHKTFKPLPSHVLTD MRMWHWLCVIKYPNIPWLRWRGSIPIDPEDGFTVGTGKKHVPSIRFLGTSSINGHGRNTFSRLFFAADRMMDKSQSDYTL VKKLFTSQELHLGLSDREFGLIPKINRVLTEKLVELPDSKVRIAIRKLNSLGGSICLDLLSEEQLQKLIDIQDKEAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27081; Mature: 27081
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREELFRLKNPLINSGLISALRYPESIGLEKVESEVDLTDLSKLVDQLILENIKGSNLDE CCHHHHHHHCCHHHHHHHHHHHCCHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHH RLVECVHKTFKPLPSHVLTDMRMWHWLCVIKYPNIPWLRWRGSIPIDPEDGFTVGTGKKH HHHHHHHHHHCCCHHHHHHHHHHHHHEEEEECCCCCEEEECCCCCCCCCCCEEECCCCCC VPSIRFLGTSSINGHGRNTFSRLFFAADRMMDKSQSDYTLVKKLFTSQELHLGLSDREFG CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHCCCCCCCCCC LIPKINRVLTEKLVELPDSKVRIAIRKLNSLGGSICLDLLSEEQLQKLIDIQDKEAS CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MREELFRLKNPLINSGLISALRYPESIGLEKVESEVDLTDLSKLVDQLILENIKGSNLDE CCHHHHHHHCCHHHHHHHHHHHCCHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHH RLVECVHKTFKPLPSHVLTDMRMWHWLCVIKYPNIPWLRWRGSIPIDPEDGFTVGTGKKH HHHHHHHHHHCCCHHHHHHHHHHHHHEEEEECCCCCEEEECCCCCCCCCCCEEECCCCCC VPSIRFLGTSSINGHGRNTFSRLFFAADRMMDKSQSDYTLVKKLFTSQELHLGLSDREFG CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHCCCCCCCCCC LIPKINRVLTEKLVELPDSKVRIAIRKLNSLGGSICLDLLSEEQLQKLIDIQDKEAS CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA