| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965681
Identifier: 123965681
GI number: 123965681
Start: 396553
End: 397584
Strand: Reverse
Name: 123965681
Synonym: P9515_04461
Alternate gene names: NA
Gene position: 397584-396553 (Counterclockwise)
Preceding gene: 123965682
Following gene: 123965680
Centisome position: 23.33
GC content: 38.18
Gene sequence:
>1032_bases ATGCATTTCGTCCCCTGGAGAACAATCGATCTTGATGGAGCATTTAGAATCACTGCTCCTGAGAGTATTTCTGAAGAGGT GATTCAAGAAGTCAGCAATGGTATTATCTTCAAGTTCAACGGCAAACTTGAGAAGACAAAACTGGAAATACTTCTTACAG CTCCGTATGAATGGGAAGAAACAATTCATCCATCAGAGAGGGAGAATCCACCTGTTAAATTTATCTGTCGTTTAATAAGT CGCTCAACTGGAAGAAGAGAAACCATAGACTTGGAAGATGGTGGGGGTGGATTTTTCTTCTCCGAAATTTCCTACATTCC ATTTATGAATGGAGAGGAAATAAGAGCAGAAGCTCTTCTTGTAAGGACTGAAAAGTTTAAAGGTTCAGACTCAAAAAGTG GGTACGCTTCAGAGATGGGGCAGATAATAGGAAGAAGTCTTATCCATACAATTCGTTTTGCAAACGCTGAAATCAGTAAT GAGTCAATTTTTGATATAAGGTGGCAATCATTTCCGTCTGAGAGTCGCGATCAATTATGGAGATTAATCCCAAGTGAACC TCCAGTGATTGAAATGAATGAGGATGTAACAGCTTCTCTTAAAAAGCTCTTGATGAGCAAATCTCTAAGAAAAGATACCA ACTGTTTACAGAGAGATGTTATTTTCACATCAATCTGTTCCACTGTTTGGACAATGCTAGTCGCAACTGCAATGAACTCC ATTCAAAATATTCTCAATACAAACAGAGAACTTAGCAGCGAAGAAGTTATTGAACAGCTCCCACAATCCCAACTTCAGAC ACTCTCATTATTCTCTAACAGTCTCCTTGAAACAAATATTTCTCCGAACGAAGCCGTTATTGCACTTGCTAATGAGCTTA GATCTCCTGAATCGTTTCAAAATTTGATTCTAAAAATGAGTTCAATAATTCAACAGGAAACAAAGATAATGGAATTAGCA GAAATAATGGCAAGAGGTTGTAGTTTTGAATCAGAGAGTTCAAAGATGCCTAAGAAAGAGGAGGTCGCATGA
Upstream 100 bases:
>100_bases CTGCGGAAAATCAATTCTCATCAGTTCCTTTTGAATGCACAGTCAAACCTCCAATAGGAGTGAACCCTGAAATTGCTGGA TTCAGGAAAGTAGGTTAGTT
Downstream 100 bases:
>100_bases GAGAAGAGCTTTTCAGATTAAAGAATCCTTTAATAAATAGTGGACTTATTTCAGCTTTAAGATATCCAGAGTCTATAGGT TTAGAGAAAGTAGAATCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MHFVPWRTIDLDGAFRITAPESISEEVIQEVSNGIIFKFNGKLEKTKLEILLTAPYEWEETIHPSERENPPVKFICRLIS RSTGRRETIDLEDGGGGFFFSEISYIPFMNGEEIRAEALLVRTEKFKGSDSKSGYASEMGQIIGRSLIHTIRFANAEISN ESIFDIRWQSFPSESRDQLWRLIPSEPPVIEMNEDVTASLKKLLMSKSLRKDTNCLQRDVIFTSICSTVWTMLVATAMNS IQNILNTNRELSSEEVIEQLPQSQLQTLSLFSNSLLETNISPNEAVIALANELRSPESFQNLILKMSSIIQQETKIMELA EIMARGCSFESESSKMPKKEEVA
Sequences:
>Translated_343_residues MHFVPWRTIDLDGAFRITAPESISEEVIQEVSNGIIFKFNGKLEKTKLEILLTAPYEWEETIHPSERENPPVKFICRLIS RSTGRRETIDLEDGGGGFFFSEISYIPFMNGEEIRAEALLVRTEKFKGSDSKSGYASEMGQIIGRSLIHTIRFANAEISN ESIFDIRWQSFPSESRDQLWRLIPSEPPVIEMNEDVTASLKKLLMSKSLRKDTNCLQRDVIFTSICSTVWTMLVATAMNS IQNILNTNRELSSEEVIEQLPQSQLQTLSLFSNSLLETNISPNEAVIALANELRSPESFQNLILKMSSIIQQETKIMELA EIMARGCSFESESSKMPKKEEVA >Mature_343_residues MHFVPWRTIDLDGAFRITAPESISEEVIQEVSNGIIFKFNGKLEKTKLEILLTAPYEWEETIHPSERENPPVKFICRLIS RSTGRRETIDLEDGGGGFFFSEISYIPFMNGEEIRAEALLVRTEKFKGSDSKSGYASEMGQIIGRSLIHTIRFANAEISN ESIFDIRWQSFPSESRDQLWRLIPSEPPVIEMNEDVTASLKKLLMSKSLRKDTNCLQRDVIFTSICSTVWTMLVATAMNS IQNILNTNRELSSEEVIEQLPQSQLQTLSLFSNSLLETNISPNEAVIALANELRSPESFQNLILKMSSIIQQETKIMELA EIMARGCSFESESSKMPKKEEVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38901; Mature: 38901
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFVPWRTIDLDGAFRITAPESISEEVIQEVSNGIIFKFNGKLEKTKLEILLTAPYEWEE CCCCCCEEEECCCCEEECCCHHHHHHHHHHHHCCEEEEECCCEEEEEEEEEEECCCCHHH TIHPSERENPPVKFICRLISRSTGRRETIDLEDGGGGFFFSEISYIPFMNGEEIRAEALL CCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCEEHHHHCCCCCCCCCHHHHHHHH VRTEKFKGSDSKSGYASEMGQIIGRSLIHTIRFANAEISNESIFDIRWQSFPSESRDQLW EEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHH RLIPSEPPVIEMNEDVTASLKKLLMSKSLRKDTNCLQRDVIFTSICSTVWTMLVATAMNS HHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQNILNTNRELSSEEVIEQLPQSQLQTLSLFSNSLLETNISPNEAVIALANELRSPESFQ HHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHH NLILKMSSIIQQETKIMELAEIMARGCSFESESSKMPKKEEVA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHCCC >Mature Secondary Structure MHFVPWRTIDLDGAFRITAPESISEEVIQEVSNGIIFKFNGKLEKTKLEILLTAPYEWEE CCCCCCEEEECCCCEEECCCHHHHHHHHHHHHCCEEEEECCCEEEEEEEEEEECCCCHHH TIHPSERENPPVKFICRLISRSTGRRETIDLEDGGGGFFFSEISYIPFMNGEEIRAEALL CCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCEEHHHHCCCCCCCCCHHHHHHHH VRTEKFKGSDSKSGYASEMGQIIGRSLIHTIRFANAEISNESIFDIRWQSFPSESRDQLW EEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHH RLIPSEPPVIEMNEDVTASLKKLLMSKSLRKDTNCLQRDVIFTSICSTVWTMLVATAMNS HHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQNILNTNRELSSEEVIEQLPQSQLQTLSLFSNSLLETNISPNEAVIALANELRSPESFQ HHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHH NLILKMSSIIQQETKIMELAEIMARGCSFESESSKMPKKEEVA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA