| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is menE [H]
Identifier: 123965438
GI number: 123965438
Start: 184982
End: 186190
Strand: Reverse
Name: menE [H]
Synonym: P9515_02031
Alternate gene names: 123965438
Gene position: 186190-184982 (Counterclockwise)
Preceding gene: 123965439
Following gene: 123965435
Centisome position: 10.93
GC content: 27.21
Gene sequence:
>1209_bases ATGAAAAACAAAATTCATATTATTGAAGTTGAAAATAATGAAAAAGAATCTACGAAGAAAATTCTTAAAAACATTAAGGA AAAGAAAATAATTTACATAAAAAATAGATCTCACGAATATGAAGAAATATATAAGGCTATTAATATAAGAGGACCAGCAG TTATCTTAAATAGCAGTGGCAGTAGTGGAAAGCCTAGAAAATGTATTCATAAATTAGAAAATCTCTATTCGTCTGCTAAG GCATCTGGAATTTGGCTTGAACGACAAGGATTTAAATTAAAACACTGTTTAGTTTTTAATACTTTGCCGTTAAATCATAT CAGTGGATTGATGCCGCTTTTTAGAAGTCAAATTTGGGATTGTGAACATATCAATATTTCCCCAGCATTAATTAAAAACC CCAAGGAATTAGTAGTCTTCACTAATAAGATAAAAAAAGATAAACATCATCTTATAACTTCATTAGTTCCAATACAATTA AAAAGACTTTTATCTGAAAAAAATGGAATTGATTGGTTAAAAATTTTTGATTTAATATGGATTGGTGGTGCATCTCTATC TATTGAAACTTCTCGAAAGTGCAGATTCGAAAAAATAAATTTAGCACCCTGTTACGGATCAACTGAAACTGCCGCTATGG TGACAAGCTTAAAACCTAAAGAATTTTTAGAAGGGCTTGATAATGTTGGGGAAATATTAACTGATATAAAATTAAGAATT AGTAAAAATGGTTTAATCCAAATTCAATCAGACAGAATAGGAATTGAATTGCTGGAATCATATCAAACTAAAAATTTCAA AGATAAAAATGGGTGGTGGGAAAGCAGTGATTCCGGAGAAATCCAAAAATTGAATAATTCTCTGTATTTGAAATTTATTC GAAGAACAGATAATGCTTTTAATTCTGGAGGGGAAATAGTTTTTCCAGAAGTCATTAAATTACGATTAAATGAATTTATC CTAAATAAAAAAATTCCAATAGAAAATTTCATAATTTCCAACATACCTAATAAAGAATGGGGAAATAAAATGGTAATCAT TATTAATTTCAAAAAACAAACTGATAAAACAAATATTGAATATTCATTAAAACTATTAAAAAACTTTTCTAAAAATTGGC CTAAACATGAGAGGCCGAAAAATTGGATTATTGGTAAACCTAAAAAAGATGATATTAAAAATTCAAATTACATGTTTACA AAATTATAA
Upstream 100 bases:
>100_bases AGTTATTGGGACCAACTCCAAAAGTTCCTGGTTTGGCTTTAAAAAAAAATCCCAATTCTTTTCTTTTTCTAAATAAGGCA CAAAAGATATGGGATCAACT
Downstream 100 bases:
>100_bases ATAATAATTAGCACTCTTTTAAATGAGTATTTATATTCGAAGCCTCTATCCATCTCTCGAGTTGATCAGGTAATTTAACC TTCAATTTTGAATTCATATC
Product: putative O-succinylbenzoic acid--CoA ligase (OSB-CoA synthetase)
Products: NA
Alternate protein names: OSB-CoA synthetase; o-succinylbenzoyl-CoA synthetase [H]
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MKNKIHIIEVENNEKESTKKILKNIKEKKIIYIKNRSHEYEEIYKAINIRGPAVILNSSGSSGKPRKCIHKLENLYSSAK ASGIWLERQGFKLKHCLVFNTLPLNHISGLMPLFRSQIWDCEHINISPALIKNPKELVVFTNKIKKDKHHLITSLVPIQL KRLLSEKNGIDWLKIFDLIWIGGASLSIETSRKCRFEKINLAPCYGSTETAAMVTSLKPKEFLEGLDNVGEILTDIKLRI SKNGLIQIQSDRIGIELLESYQTKNFKDKNGWWESSDSGEIQKLNNSLYLKFIRRTDNAFNSGGEIVFPEVIKLRLNEFI LNKKIPIENFIISNIPNKEWGNKMVIIINFKKQTDKTNIEYSLKLLKNFSKNWPKHERPKNWIIGKPKKDDIKNSNYMFT KL
Sequences:
>Translated_402_residues MKNKIHIIEVENNEKESTKKILKNIKEKKIIYIKNRSHEYEEIYKAINIRGPAVILNSSGSSGKPRKCIHKLENLYSSAK ASGIWLERQGFKLKHCLVFNTLPLNHISGLMPLFRSQIWDCEHINISPALIKNPKELVVFTNKIKKDKHHLITSLVPIQL KRLLSEKNGIDWLKIFDLIWIGGASLSIETSRKCRFEKINLAPCYGSTETAAMVTSLKPKEFLEGLDNVGEILTDIKLRI SKNGLIQIQSDRIGIELLESYQTKNFKDKNGWWESSDSGEIQKLNNSLYLKFIRRTDNAFNSGGEIVFPEVIKLRLNEFI LNKKIPIENFIISNIPNKEWGNKMVIIINFKKQTDKTNIEYSLKLLKNFSKNWPKHERPKNWIIGKPKKDDIKNSNYMFT KL >Mature_402_residues MKNKIHIIEVENNEKESTKKILKNIKEKKIIYIKNRSHEYEEIYKAINIRGPAVILNSSGSSGKPRKCIHKLENLYSSAK ASGIWLERQGFKLKHCLVFNTLPLNHISGLMPLFRSQIWDCEHINISPALIKNPKELVVFTNKIKKDKHHLITSLVPIQL KRLLSEKNGIDWLKIFDLIWIGGASLSIETSRKCRFEKINLAPCYGSTETAAMVTSLKPKEFLEGLDNVGEILTDIKLRI SKNGLIQIQSDRIGIELLESYQTKNFKDKNGWWESSDSGEIQKLNNSLYLKFIRRTDNAFNSGGEIVFPEVIKLRLNEFI LNKKIPIENFIISNIPNKEWGNKMVIIINFKKQTDKTNIEYSLKLLKNFSKNWPKHERPKNWIIGKPKKDDIKNSNYMFT KL
Specific function: Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl- CoA (OSB-CoA) [H]
COG id: COG0318
COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788595, Length=297, Percent_Identity=25.2525252525253, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR010192 - InterPro: IPR023015 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.26 [H]
Molecular weight: Translated: 46587; Mature: 46587
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKIHIIEVENNEKESTKKILKNIKEKKIIYIKNRSHEYEEIYKAINIRGPAVILNSSG CCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCCEEEEECCC SSGKPRKCIHKLENLYSSAKASGIWLERQGFKLKHCLVFNTLPLNHISGLMPLFRSQIWD CCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCC CEHINISPALIKNPKELVVFTNKIKKDKHHLITSLVPIQLKRLLSEKNGIDWLKIFDLIW CCCCCCCHHHHCCCHHEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH IGGASLSIETSRKCRFEKINLAPCYGSTETAAMVTSLKPKEFLEGLDNVGEILTDIKLRI CCCCEEEEECCCCCEEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEE SKNGLIQIQSDRIGIELLESYQTKNFKDKNGWWESSDSGEIQKLNNSLYLKFIRRTDNAF CCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCHHEEHEEHHCCCCC NSGGEIVFPEVIKLRLNEFILNKKIPIENFIISNIPNKEWGNKMVIIINFKKQTDKTNIE CCCCCEECHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCHH YSLKLLKNFSKNWPKHERPKNWIIGKPKKDDIKNSNYMFTKL HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC >Mature Secondary Structure MKNKIHIIEVENNEKESTKKILKNIKEKKIIYIKNRSHEYEEIYKAINIRGPAVILNSSG CCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCCEEEEECCC SSGKPRKCIHKLENLYSSAKASGIWLERQGFKLKHCLVFNTLPLNHISGLMPLFRSQIWD CCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCC CEHINISPALIKNPKELVVFTNKIKKDKHHLITSLVPIQLKRLLSEKNGIDWLKIFDLIW CCCCCCCHHHHCCCHHEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH IGGASLSIETSRKCRFEKINLAPCYGSTETAAMVTSLKPKEFLEGLDNVGEILTDIKLRI CCCCEEEEECCCCCEEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEE SKNGLIQIQSDRIGIELLESYQTKNFKDKNGWWESSDSGEIQKLNNSLYLKFIRRTDNAF CCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCHHEEHEEHHCCCCC NSGGEIVFPEVIKLRLNEFILNKKIPIENFIISNIPNKEWGNKMVIIINFKKQTDKTNIE CCCCCEECHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCHH YSLKLLKNFSKNWPKHERPKNWIIGKPKKDDIKNSNYMFTKL HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12663927 [H]