Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is 123968998

Identifier: 123968998

GI number: 123968998

Start: 1250992

End: 1251297

Strand: Reverse

Name: 123968998

Synonym: A9601_14661

Alternate gene names: NA

Gene position: 1251297-1250992 (Counterclockwise)

Preceding gene: 123969000

Following gene: 123968997

Centisome position: 74.93

GC content: 25.49

Gene sequence:

>306_bases
TTGAATGTTTTATTAAATTATCTTATGATTATTCGAACTTCCATAATAAATCAATTGTCTGAAAGAAGAAAGAGATTACA
TGATTTATTATTAACTCTAATAAACAAAGATAGTGAATTAGAGTTAATTGAAGAAGATTCTAGCGATTTAACATCTAGCT
ATTCCGAAAAAGACACTTTGAATTTATCTCGAGTTATAGAAAAAAATCGTAAAATAATCAAAAGATATCAAGCTATTGTA
AGAACAGCTGTTACTCTTGATGCCCTAATGGATTCTGAAAATGAAGAAAATTACAAAATCAAATAA

Upstream 100 bases:

>100_bases
TTGAAAGATAGATCCTCAAATTTATAAGAATTAATTCCTACTACATGAATTTTTCTTTTTTTTTCAGTCATGAATATTTA
ATTAAAAGAAACTTATTTAT

Downstream 100 bases:

>100_bases
AAATATTTTTTTAAAAAAAATATTACCTTTACTTTTACTACTATCCTTTATTTTTAACCCATTAAAAGTATCCGCAGAAG
TTACAGAAACAGAAATAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MNVLLNYLMIIRTSIINQLSERRKRLHDLLLTLINKDSELELIEEDSSDLTSSYSEKDTLNLSRVIEKNRKIIKRYQAIV
RTAVTLDALMDSENEENYKIK

Sequences:

>Translated_101_residues
MNVLLNYLMIIRTSIINQLSERRKRLHDLLLTLINKDSELELIEEDSSDLTSSYSEKDTLNLSRVIEKNRKIIKRYQAIV
RTAVTLDALMDSENEENYKIK
>Mature_101_residues
MNVLLNYLMIIRTSIINQLSERRKRLHDLLLTLINKDSELELIEEDSSDLTSSYSEKDTLNLSRVIEKNRKIIKRYQAIV
RTAVTLDALMDSENEENYKIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11885; Mature: 11885

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVLLNYLMIIRTSIINQLSERRKRLHDLLLTLINKDSELELIEEDSSDLTSSYSEKDTL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHCCCHHHH
NLSRVIEKNRKIIKRYQAIVRTAVTLDALMDSENEENYKIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNVLLNYLMIIRTSIINQLSERRKRLHDLLLTLINKDSELELIEEDSSDLTSSYSEKDTL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHCCCHHHH
NLSRVIEKNRKIIKRYQAIVRTAVTLDALMDSENEENYKIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA