| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is 123968997
Identifier: 123968997
GI number: 123968997
Start: 1250517
End: 1251017
Strand: Reverse
Name: 123968997
Synonym: A9601_14651
Alternate gene names: NA
Gene position: 1251017-1250517 (Counterclockwise)
Preceding gene: 123968998
Following gene: 123968996
Centisome position: 74.92
GC content: 30.74
Gene sequence:
>501_bases ATGAAGAAAATTACAAAATCAAATAAAAATATTTTTTTAAAAAAAATATTACCTTTACTTTTACTACTATCCTTTATTTT TAACCCATTAAAAGTATCCGCAGAAGTTACAGAAACAGAAATAAATGGGGAATTTATGAATGCCAGCAGTGAGTTTTTAA GAGATTTGGACTTTGAAACTTGGCAATTAGTTGCCTATAAATCACCTCTTTTTGAAGATAAATTGATCTTGAGAGTAATA GGATATCCAGGAAACCTTAGGATTGATCATCCCACTGACTTGAGGGTTGAATCAGGGAGAAAACAGTGGCTTTTAGATGA TAAAACATTACTTAATGTTGAATTGGCAAATGATCGAAGACAAGCTGCAGCAGAATTCGATCTTGATGAATTGATTAAAA ATTTAGATAAAAATAGACCATTAAGATTATCTTTGTCGGGAGTTTTTTCTGAGTTACCTGTTCCTCCTTTTGTTGTTAAA GAATGGAGATCATTAAACTGA
Upstream 100 bases:
>100_bases AATTTATCTCGAGTTATAGAAAAAAATCGTAAAATAATCAAAAGATATCAAGCTATTGTAAGAACAGCTGTTACTCTTGA TGCCCTAATGGATTCTGAAA
Downstream 100 bases:
>100_bases ATTTGACTTTTGGAGATGACTGAAAAAAATGTAAGCCATATAAAATGGATGAAAAGAGCAATCTTTTTGGCTTCTTTAGG AAAAAATACAACGAGTCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MKKITKSNKNIFLKKILPLLLLLSFIFNPLKVSAEVTETEINGEFMNASSEFLRDLDFETWQLVAYKSPLFEDKLILRVI GYPGNLRIDHPTDLRVESGRKQWLLDDKTLLNVELANDRRQAAAEFDLDELIKNLDKNRPLRLSLSGVFSELPVPPFVVK EWRSLN
Sequences:
>Translated_166_residues MKKITKSNKNIFLKKILPLLLLLSFIFNPLKVSAEVTETEINGEFMNASSEFLRDLDFETWQLVAYKSPLFEDKLILRVI GYPGNLRIDHPTDLRVESGRKQWLLDDKTLLNVELANDRRQAAAEFDLDELIKNLDKNRPLRLSLSGVFSELPVPPFVVK EWRSLN >Mature_166_residues MKKITKSNKNIFLKKILPLLLLLSFIFNPLKVSAEVTETEINGEFMNASSEFLRDLDFETWQLVAYKSPLFEDKLILRVI GYPGNLRIDHPTDLRVESGRKQWLLDDKTLLNVELANDRRQAAAEFDLDELIKNLDKNRPLRLSLSGVFSELPVPPFVVK EWRSLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19228; Mature: 19228
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKITKSNKNIFLKKILPLLLLLSFIFNPLKVSAEVTETEINGEFMNASSEFLRDLDFET CCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCEEEEEEECCCCEECCHHHHHHHCCCCC WQLVAYKSPLFEDKLILRVIGYPGNLRIDHPTDLRVESGRKQWLLDDKTLLNVELANDRR EEEEEECCCCCCCCEEEEEECCCCCEEECCCCCCEECCCCCEEEECCCEEEEEEECCCHH QAAAEFDLDELIKNLDKNRPLRLSLSGVFSELPVPPFVVKEWRSLN HHHHCCCHHHHHHHCCCCCCEEEEHHHHHHHCCCCHHHHHHHHCCC >Mature Secondary Structure MKKITKSNKNIFLKKILPLLLLLSFIFNPLKVSAEVTETEINGEFMNASSEFLRDLDFET CCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCEEEEEEECCCCEECCHHHHHHHCCCCC WQLVAYKSPLFEDKLILRVIGYPGNLRIDHPTDLRVESGRKQWLLDDKTLLNVELANDRR EEEEEECCCCCCCCEEEEEECCCCCEEECCCCCCEECCCCCEEEECCCEEEEEEECCCHH QAAAEFDLDELIKNLDKNRPLRLSLSGVFSELPVPPFVVKEWRSLN HHHHCCCHHHHHHHCCCCCCEEEEHHHHHHHCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA