| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is hisA [H]
Identifier: 123968393
GI number: 123968393
Start: 745680
End: 746447
Strand: Reverse
Name: hisA [H]
Synonym: A9601_08601
Alternate gene names: 123968393
Gene position: 746447-745680 (Counterclockwise)
Preceding gene: 123968395
Following gene: 123968392
Centisome position: 44.7
GC content: 32.81
Gene sequence:
>768_bases ATGGACCTAATACCAGCAATTGATTTAATGAATGGTAAGTGTGTAAGGCTTTTTAAAGGCGACTTTAATAAAAGAAAAGA CTTCGCCAAAGAGCCTCATGAGCAAGCTGAATTTTGGGAAAGAGAAGGAGCAAAATATATACATATAGTTGATTTGGATG CTGCAAAAACTGGATCCCCAACAAACGATAAATCTATAAAAAAGATTGCAAAAACAGTAAACATACCTATTCAAATAGGT GGGGGTATAAGGTCTCAAGAAAGGATAGAACAATTATTTTCTTATGGTGTTGAGAAAGTTATCATGGGAACCTCTGCAAT AGAAAATAAAGAACTAGTTAAAGACTTATCAAATAAATTTCCTGGAAGGATAATTGTTGGGATAGATGCAAAAGATGGAA AAGTTAGTACAAGGGGGTGGCTTGAGCAATCTAATATTTTTGCCACAGATCTAGTAAAGGAGTTTTCTTCATTTAAAATT GCTAGTTTTATTGTTACGGATATAAATACAGATGGGACGTTGGAAGGGACAAATGAAGAATTCATAAAAAGCATACTTGA AATTACAGATATTCCAGTAATAGCCTCAGGAGGTGTTGGTTCAATTTCTGATTTATTATCCTTAGTAAAATTTGAAAACT CTGGCCTATTTGGAGTAATAGTAGGTAAAGCTCTATATGAAAATAAATTCACGATAAACGAAGCGAATAATGTATTGTCA GCAGAGAGATTAAATGACATTGATTTAAACACAAATTACTACGCTTAA
Upstream 100 bases:
>100_bases ATTTTCATATTCAAAAAATGTTTAACTGAAGTAGTAATCTTAAATAGAATTACATATTGAATAGTACTACTAATAAGTAA TTAATGAAAAGGATGATTCT
Downstream 100 bases:
>100_bases AAGAGTATAAAAATTGATTTAAGGCTGGTGTTTGCAGTAATTGTTAGTTAATTTTGTATAAGAGATAAGAAATCTAGTCT TGGAATTAATTTCAAAAAAA
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [H]
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MDLIPAIDLMNGKCVRLFKGDFNKRKDFAKEPHEQAEFWEREGAKYIHIVDLDAAKTGSPTNDKSIKKIAKTVNIPIQIG GGIRSQERIEQLFSYGVEKVIMGTSAIENKELVKDLSNKFPGRIIVGIDAKDGKVSTRGWLEQSNIFATDLVKEFSSFKI ASFIVTDINTDGTLEGTNEEFIKSILEITDIPVIASGGVGSISDLLSLVKFENSGLFGVIVGKALYENKFTINEANNVLS AERLNDIDLNTNYYA
Sequences:
>Translated_255_residues MDLIPAIDLMNGKCVRLFKGDFNKRKDFAKEPHEQAEFWEREGAKYIHIVDLDAAKTGSPTNDKSIKKIAKTVNIPIQIG GGIRSQERIEQLFSYGVEKVIMGTSAIENKELVKDLSNKFPGRIIVGIDAKDGKVSTRGWLEQSNIFATDLVKEFSSFKI ASFIVTDINTDGTLEGTNEEFIKSILEITDIPVIASGGVGSISDLLSLVKFENSGLFGVIVGKALYENKFTINEANNVLS AERLNDIDLNTNYYA >Mature_255_residues MDLIPAIDLMNGKCVRLFKGDFNKRKDFAKEPHEQAEFWEREGAKYIHIVDLDAAKTGSPTNDKSIKKIAKTVNIPIQIG GGIRSQERIEQLFSYGVEKVIMGTSAIENKELVKDLSNKFPGRIIVGIDAKDGKVSTRGWLEQSNIFATDLVKEFSSFKI ASFIVTDINTDGTLEGTNEEFIKSILEITDIPVIASGGVGSISDLLSLVKFENSGLFGVIVGKALYENKFTINEANNVLS AERLNDIDLNTNYYA
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family [H]
Homologues:
Organism=Escherichia coli, GI87082028, Length=240, Percent_Identity=33.75, Blast_Score=160, Evalue=8e-41, Organism=Escherichia coli, GI1788336, Length=251, Percent_Identity=24.7011952191235, Blast_Score=88, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 [H]
Pfam domain/function: PF00977 His_biosynth [H]
EC number: =5.3.1.16 [H]
Molecular weight: Translated: 28172; Mature: 28172
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLIPAIDLMNGKCVRLFKGDFNKRKDFAKEPHEQAEFWEREGAKYIHIVDLDAAKTGSP CCCCCCEECCCCCEEEEECCCCHHHHHHHCCCHHHHHHHHHCCCCEEEEEEECCCCCCCC TNDKSIKKIAKTVNIPIQIGGGIRSQERIEQLFSYGVEKVIMGTSAIENKELVKDLSNKF CCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHCC PGRIIVGIDAKDGKVSTRGWLEQSNIFATDLVKEFSSFKIASFIVTDINTDGTLEGTNEE CCEEEEEEECCCCCCCCCCCHHCCCCHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCHH FIKSILEITDIPVIASGGVGSISDLLSLVKFENSGLFGVIVGKALYENKFTINEANNVLS HHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHCCCCEECCCCCHHH AERLNDIDLNTNYYA HHHCCCCCCCCCCCC >Mature Secondary Structure MDLIPAIDLMNGKCVRLFKGDFNKRKDFAKEPHEQAEFWEREGAKYIHIVDLDAAKTGSP CCCCCCEECCCCCEEEEECCCCHHHHHHHCCCHHHHHHHHHCCCCEEEEEEECCCCCCCC TNDKSIKKIAKTVNIPIQIGGGIRSQERIEQLFSYGVEKVIMGTSAIENKELVKDLSNKF CCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHCC PGRIIVGIDAKDGKVSTRGWLEQSNIFATDLVKEFSSFKIASFIVTDINTDGTLEGTNEE CCEEEEEEECCCCCCCCCCCHHCCCCHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCHH FIKSILEITDIPVIASGGVGSISDLLSLVKFENSGLFGVIVGKALYENKFTINEANNVLS HHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHCCCCEECCCCCHHH AERLNDIDLNTNYYA HHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA