Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is pgsA [H]

Identifier: 123968395

GI number: 123968395

Start: 747434

End: 747973

Strand: Reverse

Name: pgsA [H]

Synonym: A9601_08621

Alternate gene names: 123968395

Gene position: 747973-747434 (Counterclockwise)

Preceding gene: 123968397

Following gene: 123968393

Centisome position: 44.79

GC content: 26.3

Gene sequence:

>540_bases
TTGTTATTAAGAAAAAATCTTAGAAATTTGGCATTGAATATTCCCAATTTACTATCGATATCTCGCCTTTTCCTTGTATT
TCCATTAATACTTTTTTTAGAAATTAACAGACCTTTTTATGTTTTTATATTGATTATTATTGGAGGTTTAACTGATTATT
TTGACGGGTTAATTGCGAGAAAATTTAATCTTAAAACCAGATTAGGAGCTATCCTCGATCCCTTAAGCGATAAAGTATTC
TATTTAATTCCTTTGACCTTTCTTTGTAAAAATAATTTTATACCCTTCTGGTCTTTTTCATTAATTTTATTTAGAGAATT
AATTATCTCTGGCCTAAGGAGCTCTACAAAAGACGGTTTACCAGCATCTATATTAGGTAAATATAAAACATTTTTCTTTT
TTATTTCAGTAATTACCTTCTTTACACCATTGAAAATTAGCTTATTGAATAATTTGGCTTTAATTTTTTATTGGTTAGGA
TTCATCCTGACTTTTATGACTTTATTAGGCTATTTAAGAATTAAAAAGAATATTATCTGA

Upstream 100 bases:

>100_bases
AAATTGAATTTTAGAATCTTGCATCAAAACCATTTAAGACTTTTACTAAAAATTTAAGCTTGTTGAGAGTGTAATATATT
TTTTATATACAAAAACTAAT

Downstream 100 bases:

>100_bases
ATTTTCATCAAACTCCTCACTCTTTTTATTATTAAAATCATTCACAAAACTATCCTTTAGACCATTAAGTAAATCAAAAG
TTGGCGCCCACTCTAAATCA

Product: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase

Products: NA

Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MLLRKNLRNLALNIPNLLSISRLFLVFPLILFLEINRPFYVFILIIIGGLTDYFDGLIARKFNLKTRLGAILDPLSDKVF
YLIPLTFLCKNNFIPFWSFSLILFRELIISGLRSSTKDGLPASILGKYKTFFFFISVITFFTPLKISLLNNLALIFYWLG
FILTFMTLLGYLRIKKNII

Sequences:

>Translated_179_residues
MLLRKNLRNLALNIPNLLSISRLFLVFPLILFLEINRPFYVFILIIIGGLTDYFDGLIARKFNLKTRLGAILDPLSDKVF
YLIPLTFLCKNNFIPFWSFSLILFRELIISGLRSSTKDGLPASILGKYKTFFFFISVITFFTPLKISLLNNLALIFYWLG
FILTFMTLLGYLRIKKNII
>Mature_179_residues
MLLRKNLRNLALNIPNLLSISRLFLVFPLILFLEINRPFYVFILIIIGGLTDYFDGLIARKFNLKTRLGAILDPLSDKVF
YLIPLTFLCKNNFIPFWSFSLILFRELIISGLRSSTKDGLPASILGKYKTFFFFISVITFFTPLKISLLNNLALIFYWLG
FILTFMTLLGYLRIKKNII

Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]

COG id: COG0558

COG function: function code I; Phosphatidylglycerophosphate synthase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

Organism=Escherichia coli, GI1788220, Length=176, Percent_Identity=30.6818181818182, Blast_Score=80, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000462
- InterPro:   IPR004570 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: =2.7.8.5 [H]

Molecular weight: Translated: 20804; Mature: 20804

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF ; PS00284 SERPIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLRKNLRNLALNIPNLLSISRLFLVFPLILFLEINRPFYVFILIIIGGLTDYFDGLIAR
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
KFNLKTRLGAILDPLSDKVFYLIPLTFLCKNNFIPFWSFSLILFRELIISGLRSSTKDGL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
PASILGKYKTFFFFISVITFFTPLKISLLNNLALIFYWLGFILTFMTLLGYLRIKKNII
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLLRKNLRNLALNIPNLLSISRLFLVFPLILFLEINRPFYVFILIIIGGLTDYFDGLIAR
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
KFNLKTRLGAILDPLSDKVFYLIPLTFLCKNNFIPFWSFSLILFRELIISGLRSSTKDGL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
PASILGKYKTFFFFISVITFFTPLKISLLNNLALIFYWLGFILTFMTLLGYLRIKKNII
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA